RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 ODF2LQ9ULJ1 636 aa24.09■■□□□ 1.45
SRRT-218ENST00000620394 SMG5Q9UPR3 1016 aaKnown RBP24.09■■□□□ 1.45
SRRT-218ENST00000620394 FRYLO94915 3013 aa24.09■■□□□ 1.45
SRRT-218ENST00000620394 FAM170BA6NMN3 283 aa24.08■■□□□ 1.45
SRRT-218ENST00000620394 TKTP29401 623 aaKnown RBP24.08■■□□□ 1.45
SRRT-218ENST00000620394 LMNB2Q03252 620 aa24.08■■□□□ 1.45
SRRT-218ENST00000620394 CSTF1Q05048 431 aaKnown RBP24.08■■□□□ 1.45
SRRT-218ENST00000620394 ANKS3Q6ZW76 656 aa24.08■■□□□ 1.45
SRRT-218ENST00000620394 RTL10Q7L3V2 364 aa24.08■■□□□ 1.45
SRRT-218ENST00000620394 NPAS3Q8IXF0 933 aa24.08■■□□□ 1.45
SRRT-218ENST00000620394 ITFG1Q8TB96 612 aa24.08■■□□□ 1.45
SRRT-218ENST00000620394 ZBTB45Q96K62 511 aaPredicted RBP24.08■■□□□ 1.45
SRRT-218ENST00000620394 TCHPQ9BT92 498 aa24.08■■□□□ 1.45
SRRT-218ENST00000620394 LARSQ9P2J5 1176 aaKnown RBP24.08■■□□□ 1.45
SRRT-218ENST00000620394 KCNH3Q9ULD8 1083 aa24.08■■□□□ 1.45
SRRT-218ENST00000620394 MTF2Q9Y483 593 aaPredicted RBP24.08■■□□□ 1.45
SRRT-218ENST00000620394 H0YCG3 227 aa24.07■■□□□ 1.44
SRRT-218ENST00000620394 PODXLO00592 558 aa24.07■■□□□ 1.44
SRRT-218ENST00000620394 NCAM2O15394 837 aa24.07■■□□□ 1.44
SRRT-218ENST00000620394 BRCC3P46736 316 aa24.07■■□□□ 1.44
SRRT-218ENST00000620394 MCL1Q07820 350 aa24.07■■□□□ 1.44
SRRT-218ENST00000620394 UVSSAQ2YD98 709 aa24.07■■□□□ 1.44
SRRT-218ENST00000620394 PABPC1LQ4VXU2 614 aaKnown RBP24.07■■□□□ 1.44
SRRT-218ENST00000620394 ZBTB41Q5SVQ8 909 aa24.07■■□□□ 1.44
SRRT-218ENST00000620394 NELL1Q92832 810 aa24.07■■□□□ 1.44
SRRT-218ENST00000620394 NELL2Q99435 816 aa24.07■■□□□ 1.44
SRRT-218ENST00000620394 BLOC1S4Q9NUP1 217 aa24.07■■□□□ 1.44
SRRT-218ENST00000620394 ANKFY1Q9P2R3 1169 aa24.07■■□□□ 1.44
SRRT-218ENST00000620394 PRR5-ARHGAP8B1AHC4 643 aa24.06■■□□□ 1.44
SRRT-218ENST00000620394 SYN3O14994 580 aa24.06■■□□□ 1.44
SRRT-218ENST00000620394 LILRB5O75023 590 aa24.06■■□□□ 1.44
SRRT-218ENST00000620394 SCP2P22307 547 aa24.06■■□□□ 1.44
SRRT-218ENST00000620394 RPL9P32969 192 aaKnown RBP24.06■■□□□ 1.44
SRRT-218ENST00000620394 OR1D2P34982 312 aa24.06■■□□□ 1.44
SRRT-218ENST00000620394 RPS9P46781 194 aaKnown RBP24.06■■□□□ 1.44
SRRT-218ENST00000620394 ZNF131P52739 623 aa24.06■■□□□ 1.44
SRRT-218ENST00000620394 ARHGAP8P85298 464 aa24.06■■□□□ 1.44
SRRT-218ENST00000620394 AXDND1Q5T1B0 1012 aaPredicted RBP24.06■■□□□ 1.44
SRRT-218ENST00000620394 TPRG1Q6ZUI0 275 aa24.06■■□□□ 1.44
SRRT-218ENST00000620394 CLDN23Q96B33 292 aa24.06■■□□□ 1.44
SRRT-218ENST00000620394 CALML4Q96GE6 196 aa24.06■■□□□ 1.44
SRRT-218ENST00000620394 CNTNAP3BQ96NU0 1288 aa24.06■■□□□ 1.44
SRRT-218ENST00000620394 REEP2Q9BRK0 252 aa24.06■■□□□ 1.44
SRRT-218ENST00000620394 CNTNAP3Q9BZ76 1288 aa24.06■■□□□ 1.44
SRRT-218ENST00000620394 CDV3Q9UKY7 258 aaKnown RBP24.06■■□□□ 1.44
SRRT-218ENST00000620394 CDY1Q9Y6F8 540 aa24.06■■□□□ 1.44
SRRT-218ENST00000620394 NPHP3-ACAD11A0A0J9YXS1 232 aa24.05■■□□□ 1.44
SRRT-218ENST00000620394 I3L4J1 428 aa24.05■■□□□ 1.44
SRRT-218ENST00000620394 ECI2O75521 394 aa24.05■■□□□ 1.44
SRRT-218ENST00000620394 HARSP12081 509 aaKnown RBP24.05■■□□□ 1.44
SRRT-218ENST00000620394 LONP1P36776 959 aaKnown RBP24.05■■□□□ 1.44
SRRT-218ENST00000620394 UBA7P41226 1012 aa24.05■■□□□ 1.44
SRRT-218ENST00000620394 CACNB1Q02641 598 aaPredicted RBP24.05■■□□□ 1.44
SRRT-218ENST00000620394 SLC10A6Q3KNW5 377 aa24.05■■□□□ 1.44
SRRT-218ENST00000620394 SLC8B1Q6J4K2 584 aa24.05■■□□□ 1.44
SRRT-218ENST00000620394 HAPLN2Q9GZV7 340 aa24.05■■□□□ 1.44
SRRT-218ENST00000620394 PRMT8Q9NR22 394 aaPredicted RBP24.05■■□□□ 1.44
SRRT-218ENST00000620394 MRPS17Q9Y2R5 130 aaKnown RBP24.05■■□□□ 1.44
SRRT-218ENST00000620394 CLDN3O15551 220 aa24.04■■□□□ 1.44
SRRT-218ENST00000620394 TBC1D4O60343 1298 aa24.04■■□□□ 1.44
SRRT-218ENST00000620394 PIGRP01833 764 aa24.04■■□□□ 1.44
SRRT-218ENST00000620394 CD72P21854 359 aa24.04■■□□□ 1.44
SRRT-218ENST00000620394 TARSP26639 723 aaKnown RBP24.04■■□□□ 1.44
SRRT-218ENST00000620394 GRIN1Q05586 938 aa24.04■■□□□ 1.44
SRRT-218ENST00000620394 GPBP1Q86WP2 473 aa24.04■■□□□ 1.44
SRRT-218ENST00000620394 C18orf25Q96B23 403 aaPredicted RBP24.04■■□□□ 1.44
SRRT-218ENST00000620394 FAM126AQ9BYI3 521 aaPredicted RBP24.04■■□□□ 1.44
SRRT-218ENST00000620394 HCFC1R1Q9NWW0 138 aa24.04■■□□□ 1.44
SRRT-218ENST00000620394 DNMT3BQ9UBC3 853 aaKnown RBP24.04■■□□□ 1.44
SRRT-218ENST00000620394 PLCG1P19174 1290 aa24.03■■□□□ 1.44
SRRT-218ENST00000620394 ATXN1P54253 815 aaKnown RBP24.03■■□□□ 1.44
SRRT-218ENST00000620394 ROR1Q01973 937 aa24.03■■□□□ 1.44
SRRT-218ENST00000620394 SF3A1Q15459 793 aaKnown RBP24.03■■□□□ 1.44
SRRT-218ENST00000620394 HAUS6Q7Z4H7 955 aa24.03■■□□□ 1.44
SRRT-218ENST00000620394 RAD54LQ92698 747 aa24.03■■□□□ 1.44
SRRT-218ENST00000620394 SUSD3Q96L08 255 aa24.03■■□□□ 1.44
SRRT-218ENST00000620394 PLEKHA5Q9HAU0 1116 aa24.03■■□□□ 1.44
SRRT-218ENST00000620394 GDE1Q9NZC3 331 aa24.03■■□□□ 1.44
SRRT-218ENST00000620394 MRPS23Q9Y3D9 190 aaKnown RBP24.03■■□□□ 1.44
SRRT-218ENST00000620394 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.03■■□□□ 1.44
SRRT-218ENST00000620394 COL4A2P08572 1712 aa24.02■■□□□ 1.44
SRRT-218ENST00000620394 FAM189A1O60320 539 aa24.02■■□□□ 1.44
SRRT-218ENST00000620394 CXCL8P10145 99 aa24.02■■□□□ 1.44
SRRT-218ENST00000620394 MRPL58Q14197 206 aaKnown RBP24.02■■□□□ 1.44
SRRT-218ENST00000620394 ZNF852Q6ZMS4 543 aa24.02■■□□□ 1.44
SRRT-218ENST00000620394 ING5Q8WYH8 240 aa24.02■■□□□ 1.44
SRRT-218ENST00000620394 DNASE1L2Q92874 299 aa24.02■■□□□ 1.44
SRRT-218ENST00000620394 RTKNQ9BST9 563 aa24.02■■□□□ 1.44
SRRT-218ENST00000620394 CCSER1Q9C0I3 900 aa24.02■■□□□ 1.44
SRRT-218ENST00000620394 PARVGQ9HBI0 331 aa24.02■■□□□ 1.44
SRRT-218ENST00000620394 GMEB2Q9UKD1 530 aa24.02■■□□□ 1.44
SRRT-218ENST00000620394 ANK1P16157 1881 aa24.02■■□□□ 1.44
SRRT-218ENST00000620394 TTC26A0AVF1 554 aa24.01■■□□□ 1.43
SRRT-218ENST00000620394 ABLIM3O94929 683 aa24.01■■□□□ 1.43
SRRT-218ENST00000620394 CLTAP09496 248 aa24.01■■□□□ 1.43
SRRT-218ENST00000620394 PDCP20941 246 aa24.01■■□□□ 1.43
SRRT-218ENST00000620394 KARSQ15046 597 aaKnown RBP24.01■■□□□ 1.43
SRRT-218ENST00000620394 SEZ6Q53EL9 994 aa24.01■■□□□ 1.43
SRRT-218ENST00000620394 ZNF461Q8TAF7 563 aa24.01■■□□□ 1.43
SRRT-218ENST00000620394 FIZ1Q96SL8 496 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms