RNA–Protein interactions for RNA: ENST00000620292.4

CBWD1-229, Transcript of COBW domain containing 1, human

TSL 5

Gene CBWD1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-229	ENST00000620292	RRP7BP	Q9NSQ0	103 aa		4.91	□□□□□ -1.62
CBWD1-229	ENST00000620292	PARPBP	Q9NWS1	579 aa		4.91	□□□□□ -1.62
CBWD1-229	ENST00000620292	SAP30BP	Q9UHR5	308 aa	Known RBP	4.91	□□□□□ -1.62
CBWD1-229	ENST00000620292	IPP	Q9Y573	584 aa		4.91	□□□□□ -1.62
CBWD1-229	ENST00000620292	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	4.91	□□□□□ -1.62
CBWD1-229	ENST00000620292	PTPN23	Q9H3S7	1636 aa		4.9	□□□□□ -1.62
CBWD1-229	ENST00000620292	ABCC5	O15440	1437 aa		4.9	□□□□□ -1.62
CBWD1-229	ENST00000620292	NCOA3	Q9Y6Q9	1424 aa		4.9	□□□□□ -1.62
CBWD1-229	ENST00000620292	CAMTA1	Q9Y6Y1	1673 aa		4.9	□□□□□ -1.62
CBWD1-229	ENST00000620292	CXorf49	A8MYA2	514 aa	Predicted RBP	4.9	□□□□□ -1.63
CBWD1-229	ENST00000620292	PRR5-ARHGAP8	B1AHC4	643 aa		4.9	□□□□□ -1.63
CBWD1-229	ENST00000620292	WNT10B	O00744	389 aa		4.9	□□□□□ -1.63
CBWD1-229	ENST00000620292	TRIM24	O15164	1050 aa		4.9	□□□□□ -1.63
CBWD1-229	ENST00000620292	TEX33	O43247	280 aa		4.9	□□□□□ -1.63
CBWD1-229	ENST00000620292	XPOT	O43592	962 aa	Known RBP	4.9	□□□□□ -1.63
CBWD1-229	ENST00000620292	SGTA	O43765	313 aa		4.9	□□□□□ -1.63
CBWD1-229	ENST00000620292	ZRANB2	O95218	330 aa	Known RBP eCLIP	4.9	□□□□□ -1.63
CBWD1-229	ENST00000620292	SNRPA1	P09661	255 aa	Known RBP	4.9	□□□□□ -1.63
CBWD1-229	ENST00000620292	ATF3	P18847	181 aa		4.9	□□□□□ -1.63
CBWD1-229	ENST00000620292	MGAT1	P26572	445 aa		4.9	□□□□□ -1.63
CBWD1-229	ENST00000620292	RECQL	P46063	649 aa	Predicted RBP	4.9	□□□□□ -1.63
CBWD1-229	ENST00000620292	NEK2	P51955	445 aa		4.9	□□□□□ -1.63
CBWD1-229	ENST00000620292	PER3	P56645	1201 aa		4.9	□□□□□ -1.63
CBWD1-229	ENST00000620292	CLRN1	P58418	232 aa		4.9	□□□□□ -1.63
CBWD1-229	ENST00000620292	ATP8B2	P98198	1209 aa		4.9	□□□□□ -1.63
CBWD1-229	ENST00000620292	PTH1R	Q03431	593 aa		4.9	□□□□□ -1.63
CBWD1-229	ENST00000620292	PUM1	Q14671	1186 aa	Known RBP eCLIP	4.9	□□□□□ -1.63
CBWD1-229	ENST00000620292	NRN1L	Q496H8	165 aa		4.9	□□□□□ -1.63
CBWD1-229	ENST00000620292	SEM1	Q6ZVN7	128 aa		4.9	□□□□□ -1.63
CBWD1-229	ENST00000620292	XYLT1	Q86Y38	959 aa		4.9	□□□□□ -1.63
CBWD1-229	ENST00000620292	C7orf25	Q9BPX7	421 aa		4.9	□□□□□ -1.63
CBWD1-229	ENST00000620292	NDC1	Q9BTX1	674 aa		4.9	□□□□□ -1.63
CBWD1-229	ENST00000620292	TMEM140	Q9NV12	185 aa		4.9	□□□□□ -1.63
CBWD1-229	ENST00000620292	MOCS1	Q9NZB8	636 aa		4.9	□□□□□ -1.63
CBWD1-229	ENST00000620292	DNM3	Q9UQ16	869 aa		4.9	□□□□□ -1.63
CBWD1-229	ENST00000620292	HDAC5	Q9UQL6	1122 aa		4.9	□□□□□ -1.63
CBWD1-229	ENST00000620292	TNS1	Q9HBL0	1735 aa	Known RBP	4.89	□□□□□ -1.63
CBWD1-229	ENST00000620292	DIRC3	C9JPN6	131 aa		4.89	□□□□□ -1.63
CBWD1-229	ENST00000620292	HTRA2	O43464	458 aa	Predicted RBP	4.89	□□□□□ -1.63
CBWD1-229	ENST00000620292	AMY1A	P04745	511 aa		4.89	□□□□□ -1.63
CBWD1-229	ENST00000620292	C1S	P09871	688 aa		4.89	□□□□□ -1.63
CBWD1-229	ENST00000620292	HK1	P19367	917 aa		4.89	□□□□□ -1.63
CBWD1-229	ENST00000620292	EDNRB	P24530	442 aa		4.89	□□□□□ -1.63
CBWD1-229	ENST00000620292	PTPN7	P35236	360 aa		4.89	□□□□□ -1.63
CBWD1-229	ENST00000620292	MTM1	Q13496	603 aa		4.89	□□□□□ -1.63
CBWD1-229	ENST00000620292	ACAP2	Q15057	778 aa		4.89	□□□□□ -1.63
CBWD1-229	ENST00000620292	RABL3	Q5HYI8	236 aa		4.89	□□□□□ -1.63
CBWD1-229	ENST00000620292	PNMA8A	Q86V59	439 aa	Predicted RBP	4.89	□□□□□ -1.63
CBWD1-229	ENST00000620292	CMTR2	Q8IYT2	770 aa	Known RBP	4.89	□□□□□ -1.63
CBWD1-229	ENST00000620292	PPM1N	Q8N819	430 aa		4.89	□□□□□ -1.63
CBWD1-229	ENST00000620292	ZFP28	Q8NHY6	868 aa		4.89	□□□□□ -1.63
CBWD1-229	ENST00000620292	HDAC10	Q969S8	669 aa		4.89	□□□□□ -1.63
CBWD1-229	ENST00000620292	UHRF1	Q96T88	793 aa	Predicted RBP	4.89	□□□□□ -1.63
CBWD1-229	ENST00000620292	SMAD5	Q99717	465 aa	Known RBP	4.89	□□□□□ -1.63
CBWD1-229	ENST00000620292	SENP6	Q9GZR1	1112 aa	Predicted RBP	4.89	□□□□□ -1.63
CBWD1-229	ENST00000620292	VPS11	Q9H270	941 aa		4.89	□□□□□ -1.63
CBWD1-229	ENST00000620292	INTU	Q9ULD6	942 aa		4.89	□□□□□ -1.63
CBWD1-229	ENST00000620292	PLCH1	Q4KWH8	1693 aa		4.89	□□□□□ -1.63
CBWD1-229	ENST00000620292	SPHKAP	Q2M3C7	1700 aa		4.89	□□□□□ -1.63
CBWD1-229	ENST00000620292	DCC	P43146	1447 aa		4.89	□□□□□ -1.63
CBWD1-229	ENST00000620292	BLM	P54132	1417 aa	Predicted RBP	4.89	□□□□□ -1.63
CBWD1-229	ENST00000620292	MYOM3	Q5VTT5	1437 aa		4.89	□□□□□ -1.63
CBWD1-229	ENST00000620292	MYOM2	P54296	1465 aa		4.88	□□□□□ -1.63
CBWD1-229	ENST00000620292	C1orf167	Q5SNV9	1468 aa		4.88	□□□□□ -1.63
CBWD1-229	ENST00000620292	GPR32	O75388	356 aa		4.88	□□□□□ -1.63
CBWD1-229	ENST00000620292	AMH	P03971	560 aa		4.88	□□□□□ -1.63
CBWD1-229	ENST00000620292	PCSK1	P29120	753 aa		4.88	□□□□□ -1.63
CBWD1-229	ENST00000620292	SLC25A3	Q00325	362 aa		4.88	□□□□□ -1.63
CBWD1-229	ENST00000620292	CDC42EP1	Q00587	391 aa		4.88	□□□□□ -1.63
CBWD1-229	ENST00000620292	RRP12	Q5JTH9	1297 aa	Known RBP	4.88	□□□□□ -1.63
CBWD1-229	ENST00000620292	AFMID	Q63HM1	303 aa		4.88	□□□□□ -1.63
CBWD1-229	ENST00000620292	METRNL	Q641Q3	311 aa		4.88	□□□□□ -1.63
CBWD1-229	ENST00000620292	EFCAB12	Q6NXP0	572 aa		4.88	□□□□□ -1.63
CBWD1-229	ENST00000620292	MIGA2	Q7L4E1	593 aa		4.88	□□□□□ -1.63
CBWD1-229	ENST00000620292	ZBTB46	Q86UZ6	589 aa		4.88	□□□□□ -1.63
CBWD1-229	ENST00000620292	SYT12	Q8IV01	421 aa		4.88	□□□□□ -1.63
CBWD1-229	ENST00000620292	DRC7	Q8IY82	874 aa		4.88	□□□□□ -1.63
CBWD1-229	ENST00000620292	CPA6	Q8N4T0	437 aa		4.88	□□□□□ -1.63
CBWD1-229	ENST00000620292	SLC35B2	Q8TB61	432 aa		4.88	□□□□□ -1.63
CBWD1-229	ENST00000620292	TFAP2C	Q92754	450 aa		4.88	□□□□□ -1.63
CBWD1-229	ENST00000620292	DPF2	Q92785	391 aa		4.88	□□□□□ -1.63
CBWD1-229	ENST00000620292	DCLRE1C	Q96SD1	692 aa	Known RBP	4.88	□□□□□ -1.63
CBWD1-229	ENST00000620292	AJAP1	Q9UKB5	411 aa	Predicted RBP	4.88	□□□□□ -1.63
CBWD1-229	ENST00000620292	TRPC5	Q9UL62	973 aa	Predicted RBP	4.88	□□□□□ -1.63
CBWD1-229	ENST00000620292	LIMCH1	Q9UPQ0	1083 aa		4.88	□□□□□ -1.63
CBWD1-229	ENST00000620292	CHST2	Q9Y4C5	530 aa		4.88	□□□□□ -1.63
CBWD1-229	ENST00000620292	PNPLA7	Q6ZV29	1317 aa		4.88	□□□□□ -1.63
CBWD1-229	ENST00000620292	ABCA3	Q99758	1704 aa		4.88	□□□□□ -1.63
CBWD1-229	ENST00000620292	DAPK1	P53355	1430 aa		4.88	□□□□□ -1.63
CBWD1-229	ENST00000620292	ADGRL3	Q9HAR2	1447 aa		4.88	□□□□□ -1.63
CBWD1-229	ENST00000620292	RALGAPB	Q86X10	1494 aa		4.88	□□□□□ -1.63
CBWD1-229	ENST00000620292	ALDH1L1	O75891	902 aa		4.87	□□□□□ -1.63
CBWD1-229	ENST00000620292	SNUPN	O95149	360 aa	Known RBP	4.87	□□□□□ -1.63
CBWD1-229	ENST00000620292	TACR2	P21452	398 aa		4.87	□□□□□ -1.63
CBWD1-229	ENST00000620292	FPR1	P21462	350 aa		4.87	□□□□□ -1.63
CBWD1-229	ENST00000620292	CCND1	P24385	295 aa		4.87	□□□□□ -1.63
CBWD1-229	ENST00000620292	KIF23	Q02241	960 aa	Predicted RBP	4.87	□□□□□ -1.63
CBWD1-229	ENST00000620292	MCL1	Q07820	350 aa		4.87	□□□□□ -1.63
CBWD1-229	ENST00000620292	TUBA3C	Q13748	450 aa		4.87	□□□□□ -1.63
CBWD1-229	ENST00000620292	DACT2	Q5SW24	774 aa		4.87	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms