RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 MAPK7Q13164 816 aa23.21■■□□□ 1.31
SGMS1-210ENST00000619438 BMS1Q14692 1282 aaKnown RBP23.21■■□□□ 1.31
SGMS1-210ENST00000619438 PTPROQ16827 1216 aa23.21■■□□□ 1.31
SGMS1-210ENST00000619438 TMCO3Q6UWJ1 677 aa23.21■■□□□ 1.31
SGMS1-210ENST00000619438 CTAGE6Q86UF2 777 aa23.21■■□□□ 1.31
SGMS1-210ENST00000619438 ZNF598Q86UK7 904 aaKnown RBP23.21■■□□□ 1.31
SGMS1-210ENST00000619438 CTAGE4Q8IX94 777 aa23.21■■□□□ 1.31
SGMS1-210ENST00000619438 MSANTD4Q8NCY6 345 aa23.21■■□□□ 1.31
SGMS1-210ENST00000619438 HELQQ8TDG4 1101 aa23.21■■□□□ 1.31
SGMS1-210ENST00000619438 BSNDQ8WZ55 320 aa23.21■■□□□ 1.31
SGMS1-210ENST00000619438 SLC35C1Q96A29 364 aa23.21■■□□□ 1.31
SGMS1-210ENST00000619438 DRC1Q96MC2 740 aa23.21■■□□□ 1.31
SGMS1-210ENST00000619438 CASD1Q96PB1 797 aa23.21■■□□□ 1.31
SGMS1-210ENST00000619438 TIPINQ9BVW5 301 aa23.21■■□□□ 1.31
SGMS1-210ENST00000619438 NLRC4Q9NPP4 1024 aa23.21■■□□□ 1.31
SGMS1-210ENST00000619438 PRMT7Q9NVM4 692 aaPredicted RBP23.21■■□□□ 1.31
SGMS1-210ENST00000619438 LMCD1Q9NZU5 365 aa23.21■■□□□ 1.31
SGMS1-210ENST00000619438 TFR2Q9UP52 801 aa23.21■■□□□ 1.31
SGMS1-210ENST00000619438 PCDHB12Q9Y5F1 795 aa23.21■■□□□ 1.31
SGMS1-210ENST00000619438 ZNF623O75123 536 aa23.2■■□□□ 1.3
SGMS1-210ENST00000619438 HIP1RO75146 1068 aa23.2■■□□□ 1.3
SGMS1-210ENST00000619438 TUBBP07437 444 aa23.2■■□□□ 1.3
SGMS1-210ENST00000619438 PSMC2P35998 433 aaKnown RBP23.2■■□□□ 1.3
SGMS1-210ENST00000619438 KCNA1Q09470 495 aa23.2■■□□□ 1.3
SGMS1-210ENST00000619438 SKIV2LQ15477 1246 aaKnown RBP23.2■■□□□ 1.3
SGMS1-210ENST00000619438 MAPK6Q16659 721 aa23.2■■□□□ 1.3
SGMS1-210ENST00000619438 EXOC3L4Q17RC7 722 aa23.2■■□□□ 1.3
SGMS1-210ENST00000619438 HS2ST1Q7LGA3 356 aa23.2■■□□□ 1.3
SGMS1-210ENST00000619438 SLC9A9Q8IVB4 645 aa23.2■■□□□ 1.3
SGMS1-210ENST00000619438 LPPQ93052 612 aa23.2■■□□□ 1.3
SGMS1-210ENST00000619438 CRACR2AQ9BSW2 395 aa23.2■■□□□ 1.3
SGMS1-210ENST00000619438 PLVAPQ9BX97 442 aa23.2■■□□□ 1.3
SGMS1-210ENST00000619438 TRIM6Q9C030 488 aaPredicted RBP23.2■■□□□ 1.3
SGMS1-210ENST00000619438 LUC7LQ9NQ29 371 aaKnown RBP23.2■■□□□ 1.3
SGMS1-210ENST00000619438 C5orf67F2Z3F1 127 aa23.19■■□□□ 1.3
SGMS1-210ENST00000619438 ATF7P17544 494 aaPredicted RBP23.19■■□□□ 1.3
SGMS1-210ENST00000619438 ARF4P18085 180 aaPredicted RBP23.19■■□□□ 1.3
SGMS1-210ENST00000619438 MAGEA1P43355 309 aa23.19■■□□□ 1.3
SGMS1-210ENST00000619438 PEX3P56589 373 aa23.19■■□□□ 1.3
SGMS1-210ENST00000619438 GLIPR1L2Q4G1C9 344 aa23.19■■□□□ 1.3
SGMS1-210ENST00000619438 GLB1LQ6UWU2 654 aa23.19■■□□□ 1.3
SGMS1-210ENST00000619438 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.19■■□□□ 1.3
SGMS1-210ENST00000619438 DAW1Q8N136 415 aa23.19■■□□□ 1.3
SGMS1-210ENST00000619438 RPGRIP1Q96KN7 1286 aa23.19■■□□□ 1.3
SGMS1-210ENST00000619438 PARD6BQ9BYG5 372 aa23.19■■□□□ 1.3
SGMS1-210ENST00000619438 PUF60Q9UHX1 559 aaKnown RBP23.19■■□□□ 1.3
SGMS1-210ENST00000619438 RALGAPA2Q2PPJ7 1873 aa23.19■■□□□ 1.3
SGMS1-210ENST00000619438 B4GALT5O43286 388 aa23.19■■□□□ 1.3
SGMS1-210ENST00000619438 TACC1O75410 805 aa23.19■■□□□ 1.3
SGMS1-210ENST00000619438 ATP1A1P05023 1023 aaKnown RBP23.19■■□□□ 1.3
SGMS1-210ENST00000619438 LINC00271P0C7V0 271 aa23.19■■□□□ 1.3
SGMS1-210ENST00000619438 PON1P27169 355 aa23.19■■□□□ 1.3
SGMS1-210ENST00000619438 ANXA13P27216 316 aa23.19■■□□□ 1.3
SGMS1-210ENST00000619438 DMP1Q13316 513 aaPredicted RBP23.19■■□□□ 1.3
SGMS1-210ENST00000619438 BRD3Q15059 726 aa23.19■■□□□ 1.3
SGMS1-210ENST00000619438 CLLU1OSQ5K130 101 aa23.19■■□□□ 1.3
SGMS1-210ENST00000619438 KLHDC7AQ5VTJ3 777 aa23.19■■□□□ 1.3
SGMS1-210ENST00000619438 CDCA2Q69YH5 1023 aaPredicted RBP23.19■■□□□ 1.3
SGMS1-210ENST00000619438 GBP6Q6ZN66 633 aa23.19■■□□□ 1.3
SGMS1-210ENST00000619438 RNF10Q8N5U6 811 aaKnown RBP23.19■■□□□ 1.3
SGMS1-210ENST00000619438 GBP3Q9H0R5 595 aa23.19■■□□□ 1.3
SGMS1-210ENST00000619438 RAB21Q9UL25 225 aa23.19■■□□□ 1.3
SGMS1-210ENST00000619438 JRKLQ9Y4A0 524 aa23.19■■□□□ 1.3
SGMS1-210ENST00000619438 BZW2Q9Y6E2 419 aaKnown RBP23.19■■□□□ 1.3
SGMS1-210ENST00000619438 DUSP10Q9Y6W6 482 aa23.19■■□□□ 1.3
SGMS1-210ENST00000619438 COL4A6Q14031 1691 aa23.18■■□□□ 1.3
SGMS1-210ENST00000619438 SPTBN5Q9NRC6 3674 aaKnown RBP23.18■■□□□ 1.3
SGMS1-210ENST00000619438 CCDC151A5D8V7 595 aa23.18■■□□□ 1.3
SGMS1-210ENST00000619438 K7ERI5 159 aa23.18■■□□□ 1.3
SGMS1-210ENST00000619438 PRLRP16471 622 aa23.18■■□□□ 1.3
SGMS1-210ENST00000619438 CASP4P49662 377 aa23.18■■□□□ 1.3
SGMS1-210ENST00000619438 EFNA5P52803 228 aa23.18■■□□□ 1.3
SGMS1-210ENST00000619438 PRPF4BQ13523 1007 aaKnown RBP23.18■■□□□ 1.3
SGMS1-210ENST00000619438 AMHR2Q16671 573 aa23.18■■□□□ 1.3
SGMS1-210ENST00000619438 ZC2HC1CQ53FD0 456 aaPredicted RBP23.18■■□□□ 1.3
SGMS1-210ENST00000619438 LRRC43Q8N309 656 aa23.18■■□□□ 1.3
SGMS1-210ENST00000619438 KIFC3Q9BVG8 833 aa23.18■■□□□ 1.3
SGMS1-210ENST00000619438 FZD8Q9H461 694 aa23.18■■□□□ 1.3
SGMS1-210ENST00000619438 ALG13Q9NP73 1137 aaKnown RBP23.18■■□□□ 1.3
SGMS1-210ENST00000619438 RNF19AQ9NV58 838 aa23.18■■□□□ 1.3
SGMS1-210ENST00000619438 INPP5FQ9Y2H2 1132 aa23.18■■□□□ 1.3
SGMS1-210ENST00000619438 DAAM1Q9Y4D1 1078 aa23.18■■□□□ 1.3
SGMS1-210ENST00000619438 CLIC2O15247 247 aa23.17■■□□□ 1.3
SGMS1-210ENST00000619438 PRKCBP05771 671 aa23.17■■□□□ 1.3
SGMS1-210ENST00000619438 UCHL3P15374 230 aa23.17■■□□□ 1.3
SGMS1-210ENST00000619438 CKAP4Q07065 602 aaKnown RBP23.17■■□□□ 1.3
SGMS1-210ENST00000619438 ASIC2Q16515 512 aa23.17■■□□□ 1.3
SGMS1-210ENST00000619438 SLC18A3Q16572 532 aa23.17■■□□□ 1.3
SGMS1-210ENST00000619438 TDRD12Q587J7 1177 aaKnown RBP23.17■■□□□ 1.3
SGMS1-210ENST00000619438 UBXN11Q5T124 520 aa23.17■■□□□ 1.3
SGMS1-210ENST00000619438 CDR2LQ86X02 465 aaPredicted RBP23.17■■□□□ 1.3
SGMS1-210ENST00000619438 FAM186BQ8IYM0 893 aa23.17■■□□□ 1.3
SGMS1-210ENST00000619438 KLHL23Q8NBE8 558 aa23.17■■□□□ 1.3
SGMS1-210ENST00000619438 MRPL38Q96DV4 380 aaKnown RBP23.17■■□□□ 1.3
SGMS1-210ENST00000619438 ARID3AQ99856 593 aa23.17■■□□□ 1.3
SGMS1-210ENST00000619438 EIF2AQ9BY44 585 aaKnown RBP23.17■■□□□ 1.3
SGMS1-210ENST00000619438 MRPL9Q9BYD2 267 aaKnown RBP23.17■■□□□ 1.3
SGMS1-210ENST00000619438 ST6GALNAC4Q9H4F1 302 aa23.17■■□□□ 1.3
SGMS1-210ENST00000619438 C17orf75Q9HAS0 396 aa23.17■■□□□ 1.3
SGMS1-210ENST00000619438 KMT5AQ9NQR1 393 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms