RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 GOLGA5Q8TBA6 731 aa10.06□□□□□ -0.8
SYN3-213ENST00000619146 ZNF507Q8TCN5 953 aa10.06□□□□□ -0.8
SYN3-213ENST00000619146 SCFD1Q8WVM8 642 aa10.06□□□□□ -0.8
SYN3-213ENST00000619146 NELFBQ8WX92 580 aa10.06□□□□□ -0.8
SYN3-213ENST00000619146 HPS3Q969F9 1004 aa10.06□□□□□ -0.8
SYN3-213ENST00000619146 B3GALT6Q96L58 329 aa10.06□□□□□ -0.8
SYN3-213ENST00000619146 TSG101Q99816 390 aa10.06□□□□□ -0.8
SYN3-213ENST00000619146 EMILIN2Q9BXX0 1053 aa10.06□□□□□ -0.8
SYN3-213ENST00000619146 C2orf40Q9H1Z8 148 aa10.06□□□□□ -0.8
SYN3-213ENST00000619146 TMEM206Q9H813 350 aa10.06□□□□□ -0.8
SYN3-213ENST00000619146 EXOC7Q9UPT5 735 aa10.06□□□□□ -0.8
SYN3-213ENST00000619146 MAPK8IP1Q9UQF2 711 aa10.06□□□□□ -0.8
SYN3-213ENST00000619146 SIT1Q9Y3P8 196 aa10.06□□□□□ -0.8
SYN3-213ENST00000619146 ANK1P16157 1881 aa10.06□□□□□ -0.8
SYN3-213ENST00000619146 CLUHO75153 1309 aa10.06□□□□□ -0.8
SYN3-213ENST00000619146 FRYQ5TBA9 3013 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 SLC16A4O15374 487 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 OFD1O75665 1012 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 PPP1R37O75864 691 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 CD44P16070 742 aaKnown RBP10.05□□□□□ -0.8
SYN3-213ENST00000619146 CCNE1P24864 410 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 CASP5P51878 434 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 NCKAP1LP55160 1127 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 GTF2BQ00403 316 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 SPATA1Q5VX52 437 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 CENPPQ6IPU0 288 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 PPP4R3CPQ6ZMV5 832 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 HS2ST1Q7LGA3 356 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 CATSPER4Q7RTX7 472 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 HAUS6Q7Z4H7 955 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 ZNF410Q86VK4 478 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 PPFIBP1Q86W92 1011 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 RHPN2Q8IUC4 686 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 C1orf210Q8IVY1 113 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 TMEM161BQ8NDZ6 487 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 ASAP3Q8TDY4 903 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 NOC3LQ8WTT2 800 aaKnown RBP10.05□□□□□ -0.8
SYN3-213ENST00000619146 SMG7Q92540 1137 aaKnown RBP10.05□□□□□ -0.8
SYN3-213ENST00000619146 RUBCNQ92622 972 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 RABGGTAQ92696 567 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 NLRP4Q96MN2 994 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 FAM193BQ96PV7 902 aaPredicted RBP10.05□□□□□ -0.8
SYN3-213ENST00000619146 ACCSQ96QU6 501 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 FIZ1Q96SL8 496 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 RPP25Q9BUL9 199 aaKnown RBP10.05□□□□□ -0.8
SYN3-213ENST00000619146 STRA6Q9BX79 667 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 NFKBIZQ9BYH8 718 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 GCOM2Q9BZD3 368 aaPredicted RBP10.05□□□□□ -0.8
SYN3-213ENST00000619146 PIDD1Q9HB75 910 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 CBX8Q9HC52 389 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 POLD4Q9HCU8 107 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 ARHGEF3Q9NR81 526 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 MRPL17Q9NRX2 175 aaKnown RBP10.05□□□□□ -0.8
SYN3-213ENST00000619146 FAM105AQ9NUU6 356 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 IGSF9Q9P2J2 1179 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 CGNQ9P2M7 1197 aaKnown RBP10.05□□□□□ -0.8
SYN3-213ENST00000619146 ARHGAP28Q9P2N2 729 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 NCDNQ9UBB6 729 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 WNT16Q9UBV4 365 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 RALYQ9UKM9 306 aaKnown RBP10.05□□□□□ -0.8
SYN3-213ENST00000619146 CTNND2Q9UQB3 1225 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 IRAK3Q9Y616 596 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 GREB1Q4ZG55 1949 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 F5P12259 2224 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 EML5Q05BV3 1969 aa10.05□□□□□ -0.8
SYN3-213ENST00000619146 DCDC2BA2VCK2 349 aa10.04□□□□□ -0.8
SYN3-213ENST00000619146 LRRIQ4A6NIV6 560 aa10.04□□□□□ -0.8
SYN3-213ENST00000619146 TEX28O15482 410 aa10.04□□□□□ -0.8
SYN3-213ENST00000619146 CALUO43852 315 aaPredicted RBP10.04□□□□□ -0.8
SYN3-213ENST00000619146 SRGAP2CP0DJJ0 459 aa10.04□□□□□ -0.8
SYN3-213ENST00000619146 SRFP11831 508 aa10.04□□□□□ -0.8
SYN3-213ENST00000619146 RPL17P18621 184 aaKnown RBP10.04□□□□□ -0.8
SYN3-213ENST00000619146 CD72P21854 359 aa10.04□□□□□ -0.8
SYN3-213ENST00000619146 RPL13P26373 211 aaKnown RBP10.04□□□□□ -0.8
SYN3-213ENST00000619146 NMT1P30419 496 aaKnown RBP10.04□□□□□ -0.8
SYN3-213ENST00000619146 STRN3Q13033 797 aa10.04□□□□□ -0.8
SYN3-213ENST00000619146 CAPSQ13938 189 aa10.04□□□□□ -0.8
SYN3-213ENST00000619146 HSP90AA2PQ14568 343 aaPredicted RBP10.04□□□□□ -0.8
SYN3-213ENST00000619146 IQCB1Q15051 598 aa10.04□□□□□ -0.8
SYN3-213ENST00000619146 TPD52L1Q16890 204 aaPredicted RBP10.04□□□□□ -0.8
SYN3-213ENST00000619146 UVSSAQ2YD98 709 aa10.04□□□□□ -0.8
SYN3-213ENST00000619146 EDRF1Q3B7T1 1238 aa10.04□□□□□ -0.8
SYN3-213ENST00000619146 CDCA2Q69YH5 1023 aaPredicted RBP10.04□□□□□ -0.8
SYN3-213ENST00000619146 DCLRE1AQ6PJP8 1040 aa10.04□□□□□ -0.8
SYN3-213ENST00000619146 TSSK4Q6SA08 328 aa10.04□□□□□ -0.8
SYN3-213ENST00000619146 AGMOQ6ZNB7 445 aa10.04□□□□□ -0.8
SYN3-213ENST00000619146 LUZP1Q86V48 1076 aa10.04□□□□□ -0.8
SYN3-213ENST00000619146 ZBTB8OSQ8IWT0 167 aa10.04□□□□□ -0.8
SYN3-213ENST00000619146 DHX40Q8IX18 779 aaKnown RBP10.04□□□□□ -0.8
SYN3-213ENST00000619146 SYCP3Q8IZU3 236 aa10.04□□□□□ -0.8
SYN3-213ENST00000619146 RNF149Q8NC42 400 aa10.04□□□□□ -0.8
SYN3-213ENST00000619146 RNF214Q8ND24 703 aa10.04□□□□□ -0.8
SYN3-213ENST00000619146 BSNDQ8WZ55 320 aa10.04□□□□□ -0.8
SYN3-213ENST00000619146 FGFBP2Q9BYJ0 223 aa10.04□□□□□ -0.8
SYN3-213ENST00000619146 RBSNQ9H1K0 784 aa10.04□□□□□ -0.8
SYN3-213ENST00000619146 TMEM134Q9H6X4 195 aa10.04□□□□□ -0.8
SYN3-213ENST00000619146 SPATA6Q9NWH7 488 aaPredicted RBP10.04□□□□□ -0.8
SYN3-213ENST00000619146 DLL3Q9NYJ7 618 aa10.04□□□□□ -0.8
SYN3-213ENST00000619146 TBX20Q9UMR3 447 aa10.04□□□□□ -0.8
SYN3-213ENST00000619146 FAN1Q9Y2M0 1017 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms