RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 JAK3P52333 1124 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 ZNF131P52739 623 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 SLC8A3P57103 927 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 MAPK7Q13164 816 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 DRAP1Q14919 205 aaPredicted RBP7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 RINT1Q6NUQ1 792 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 SWSAP1Q6NVH7 229 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 CYFIP1Q7L576 1253 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 DNERQ8NFT8 737 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 FBXO25Q8TCJ0 367 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 CCT6BQ92526 530 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 R3HDMLQ9H3Y0 253 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 JPH1Q9HDC5 661 aaPredicted RBP7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 TMEM59LQ9UK28 342 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 DCDC2CA8MYV0 355 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 RSPH10B2B2RC85 870 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 SLC16A3O15427 465 aaKnown RBP7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 THAP12O43422 761 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 DIAPH2O60879 1101 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 ACSL3O95573 720 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 ANP32DO95626 131 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 GAS8O95995 478 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 S100BP04271 92 aaPredicted RBP7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 RSPH10BP0C881 870 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 SFNP31947 248 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 CETN2P41208 172 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 SSR1P43307 286 aaKnown RBP7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 MYL7Q01449 175 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 FSTL1Q12841 308 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 GIT2Q14161 759 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 CCDC6Q16204 474 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 ZCWPW2Q504Y3 356 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 ZNF394Q53GI3 561 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 ARSHQ5FYA8 562 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 SPRYD7Q5W111 196 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 TRIM68Q6AZZ1 485 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 CCDC137Q6PK04 289 aaKnown RBP7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 ZNF454Q8N9F8 522 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 GDAP1Q8TB36 358 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 GTF3C2Q8WUA4 911 aaPredicted RBP7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 ARHGEF2Q92974 986 aaKnown RBP7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 STAMBPL1Q96FJ0 436 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 PORCNQ9H237 461 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 MROH8Q9H579 483 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 OSGEPQ9NPF4 335 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 ABT1Q9ULW3 272 aaKnown RBP7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 TCP11X1B4DZS4 312 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 DHX15O43143 795 aaKnown RBP7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 PHF2O75151 1096 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 MYBP10242 640 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 NQO1P15559 274 aaKnown RBP7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 GAP43P17677 238 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 PAX7P23759 505 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 PRKCIP41743 596 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 PSMC5P62195 406 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 TAF11Q15544 211 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 CRELD2Q6UXH1 353 aaPredicted RBP7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 ARHGEF18Q6ZSZ5 1173 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 IRF2BP2Q7Z5L9 587 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 DPP9Q86TI2 863 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 RNF135Q8IUD6 432 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 KIRREL3Q8IZU9 778 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 LRRC57Q8N9N7 239 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 BCAS3Q9H6U6 928 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 SLC9A2Q9UBY0 812 aa7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 GNEQ9Y223 722 aaKnown RBP7.44□□□□□ -1.22
SRGAP3-213ENST00000618999 H0YGN5 161 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 PSAPP07602 524 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 CCND1P24385 295 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 YWHABP31946 246 aaKnown RBP7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 IRX1P78414 480 aaPredicted RBP7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 ODR4Q5SWX8 454 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 CAPRIN2Q6IMN6 1127 aaKnown RBP7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 GJB7Q6PEY0 223 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 FAM178BQ8IXR5 827 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 SLAIN1Q8ND83 568 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 ARMC2Q8NEN0 867 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 ATP6V0A1Q93050 837 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 SAAL1Q96ER3 474 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 TXLNGQ9NUQ3 528 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 FGFR1OP2Q9NVK5 253 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 WRAP73Q9P2S5 460 aaPredicted RBP7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 ARL2BPQ9Y2Y0 163 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 NFS1Q9Y697 457 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 TMEM150BA6NC51 233 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 SOWAHBA6NEL2 793 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 IGF2BP3O00425 579 aaKnown RBP eCLIP7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 DDX3XO00571 662 aaKnown RBP eCLIP7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 MGRN1O60291 552 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 DKC1O60832 514 aaKnown RBP eCLIP7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 STAM2O75886 525 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 UBOX5O94941 541 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 CCNE2O96020 404 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 NUDT17P0C025 328 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 CST9Q5W186 159 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 PPP4R4Q6NUP7 873 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 ZNF365Q70YC5 407 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 SPATA21Q7Z572 469 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 RASGEF1CQ8N431 466 aa7.43□□□□□ -1.22
SRGAP3-213ENST00000618999 EPS8L3Q8TE67 593 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms