RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 KCNH2Q12809 1159 aa24.46■■□□□ 1.51
CBWD3-213ENST00000618217 CBWD6Q4V339 395 aa24.46■■□□□ 1.51
CBWD3-213ENST00000618217 CBWD3Q5JTY5 395 aa24.46■■□□□ 1.51
CBWD3-213ENST00000618217 MIIPQ5JXC2 388 aa24.46■■□□□ 1.51
CBWD3-213ENST00000618217 CBWD5Q5RIA9 395 aa24.46■■□□□ 1.51
CBWD3-213ENST00000618217 APTXQ7Z2E3 356 aaKnown RBP24.46■■□□□ 1.51
CBWD3-213ENST00000618217 TIFAQ96CG3 184 aa24.46■■□□□ 1.51
CBWD3-213ENST00000618217 LIMA1Q9UHB6 759 aaKnown RBP24.46■■□□□ 1.51
CBWD3-213ENST00000618217 PRG3Q9Y2Y8 225 aaPredicted RBP24.46■■□□□ 1.51
CBWD3-213ENST00000618217 CARNS1A5YM72 827 aa24.46■■□□□ 1.51
CBWD3-213ENST00000618217 C5orf67F2Z3F1 127 aa24.46■■□□□ 1.51
CBWD3-213ENST00000618217 PMM2O15305 246 aa24.46■■□□□ 1.51
CBWD3-213ENST00000618217 KIF4AO95239 1232 aa24.46■■□□□ 1.51
CBWD3-213ENST00000618217 FMO5P49326 533 aa24.46■■□□□ 1.51
CBWD3-213ENST00000618217 KRT31Q15323 416 aa24.46■■□□□ 1.51
CBWD3-213ENST00000618217 MAN2A1Q16706 1144 aa24.46■■□□□ 1.51
CBWD3-213ENST00000618217 TGS1Q96RS0 853 aaKnown RBP24.46■■□□□ 1.51
CBWD3-213ENST00000618217 SLC28A3Q9HAS3 691 aa24.46■■□□□ 1.51
CBWD3-213ENST00000618217 AGAP1Q9UPQ3 857 aa24.46■■□□□ 1.51
CBWD3-213ENST00000618217 RWDD3Q9Y3V2 267 aa24.46■■□□□ 1.51
CBWD3-213ENST00000618217 PCDHB12Q9Y5F1 795 aa24.46■■□□□ 1.51
CBWD3-213ENST00000618217 SOX1O00570 391 aaPredicted RBP24.45■■□□□ 1.5
CBWD3-213ENST00000618217 B3GAT3O94766 335 aa24.45■■□□□ 1.5
CBWD3-213ENST00000618217 POLR2BP30876 1174 aaKnown RBP24.45■■□□□ 1.5
CBWD3-213ENST00000618217 RBP5P82980 135 aa24.45■■□□□ 1.5
CBWD3-213ENST00000618217 EPC2Q52LR7 807 aa24.45■■□□□ 1.5
CBWD3-213ENST00000618217 PPP2R2DQ66LE6 453 aa24.45■■□□□ 1.5
CBWD3-213ENST00000618217 KRT39Q6A163 491 aa24.45■■□□□ 1.5
CBWD3-213ENST00000618217 IGSF21Q96ID5 467 aa24.45■■□□□ 1.5
CBWD3-213ENST00000618217 COLEC11Q9BWP8 271 aa24.45■■□□□ 1.5
CBWD3-213ENST00000618217 PLVAPQ9BX97 442 aa24.45■■□□□ 1.5
CBWD3-213ENST00000618217 MMRN2Q9H8L6 949 aa24.45■■□□□ 1.5
CBWD3-213ENST00000618217 SPG21Q9NZD8 308 aa24.45■■□□□ 1.5
CBWD3-213ENST00000618217 COQ4Q9Y3A0 265 aa24.45■■□□□ 1.5
CBWD3-213ENST00000618217 PLXNA4Q9HCM2 1894 aa24.44■■□□□ 1.5
CBWD3-213ENST00000618217 AFPP02771 609 aaKnown RBP24.44■■□□□ 1.5
CBWD3-213ENST00000618217 LILRA4P59901 499 aa24.44■■□□□ 1.5
CBWD3-213ENST00000618217 LRRC52Q8N7C0 313 aa24.44■■□□□ 1.5
CBWD3-213ENST00000618217 SAMD11Q96NU1 681 aa24.44■■□□□ 1.5
CBWD3-213ENST00000618217 XYLT2Q9H1B5 865 aa24.44■■□□□ 1.5
CBWD3-213ENST00000618217 CTNNB1P35222 781 aa24.43■■□□□ 1.5
CBWD3-213ENST00000618217 AARSP49588 968 aaKnown RBP eCLIP24.43■■□□□ 1.5
CBWD3-213ENST00000618217 MXI1P50539 228 aa24.43■■□□□ 1.5
CBWD3-213ENST00000618217 BIRC3Q13489 604 aa24.43■■□□□ 1.5
CBWD3-213ENST00000618217 KLHL23Q8NBE8 558 aa24.43■■□□□ 1.5
CBWD3-213ENST00000618217 RNF214Q8ND24 703 aa24.43■■□□□ 1.5
CBWD3-213ENST00000618217 TAS1R2Q8TE23 839 aa24.43■■□□□ 1.5
CBWD3-213ENST00000618217 VN1R3Q9BXE9 311 aa24.43■■□□□ 1.5
CBWD3-213ENST00000618217 ADAM28Q9UKQ2 775 aa24.43■■□□□ 1.5
CBWD3-213ENST00000618217 SPTLC1O15269 473 aa24.43■■□□□ 1.5
CBWD3-213ENST00000618217 RB1P06400 928 aa24.43■■□□□ 1.5
CBWD3-213ENST00000618217 KRT19P08727 400 aa24.43■■□□□ 1.5
CBWD3-213ENST00000618217 CDK11BP21127 795 aaKnown RBP24.43■■□□□ 1.5
CBWD3-213ENST00000618217 PPM1AP35813 382 aa24.43■■□□□ 1.5
CBWD3-213ENST00000618217 NCOA4Q13772 614 aa24.43■■□□□ 1.5
CBWD3-213ENST00000618217 VWA3BQ502W6 1294 aa24.43■■□□□ 1.5
CBWD3-213ENST00000618217 SEMA4DQ92854 862 aa24.43■■□□□ 1.5
CBWD3-213ENST00000618217 NDST4Q9H3R1 872 aa24.43■■□□□ 1.5
CBWD3-213ENST00000618217 TAB2Q9NYJ8 693 aa24.43■■□□□ 1.5
CBWD3-213ENST00000618217 MTUS1Q9ULD2 1270 aa24.43■■□□□ 1.5
CBWD3-213ENST00000618217 MYO9BQ13459 2157 aa24.42■■□□□ 1.5
CBWD3-213ENST00000618217 P4HA2O15460 535 aa24.42■■□□□ 1.5
CBWD3-213ENST00000618217 PHACTR2O75167 634 aa24.42■■□□□ 1.5
CBWD3-213ENST00000618217 LRRN2O75325 713 aa24.42■■□□□ 1.5
CBWD3-213ENST00000618217 FGF18O76093 207 aa24.42■■□□□ 1.5
CBWD3-213ENST00000618217 HLA-DRAP01903 254 aa24.42■■□□□ 1.5
CBWD3-213ENST00000618217 PRKCSHP14314 528 aaPredicted RBP24.42■■□□□ 1.5
CBWD3-213ENST00000618217 MYL6P60660 151 aa24.42■■□□□ 1.5
CBWD3-213ENST00000618217 PLCB3Q01970 1234 aa24.42■■□□□ 1.5
CBWD3-213ENST00000618217 RNF168Q8IYW5 571 aaPredicted RBP24.42■■□□□ 1.5
CBWD3-213ENST00000618217 HASPINQ8TF76 798 aa24.42■■□□□ 1.5
CBWD3-213ENST00000618217 RBSNQ9H1K0 784 aa24.42■■□□□ 1.5
CBWD3-213ENST00000618217 TRANK1O15050 2925 aa24.42■■□□□ 1.5
CBWD3-213ENST00000618217 GOLGA6L19H0YKK7 550 aa24.41■■□□□ 1.5
CBWD3-213ENST00000618217 TADA2AO75478 443 aa24.41■■□□□ 1.5
CBWD3-213ENST00000618217 PNPLA4P41247 253 aa24.41■■□□□ 1.5
CBWD3-213ENST00000618217 TIGD5Q53EQ6 642 aa24.41■■□□□ 1.5
CBWD3-213ENST00000618217 FBXL13Q8NEE6 735 aa24.41■■□□□ 1.5
CBWD3-213ENST00000618217 HPDLQ96IR7 371 aa24.41■■□□□ 1.5
CBWD3-213ENST00000618217 GPR62Q9BZJ7 368 aa24.41■■□□□ 1.5
CBWD3-213ENST00000618217 VWA8A3KMH1 1905 aa24.4■■□□□ 1.5
CBWD3-213ENST00000618217 N4BP1O75113 896 aaKnown RBP24.4■■□□□ 1.5
CBWD3-213ENST00000618217 STAU1O95793 577 aaKnown RBP24.4■■□□□ 1.5
CBWD3-213ENST00000618217 PAX3P23760 479 aa24.4■■□□□ 1.5
CBWD3-213ENST00000618217 BRCC3P46736 316 aa24.4■■□□□ 1.5
CBWD3-213ENST00000618217 TAF6P49848 677 aa24.4■■□□□ 1.5
CBWD3-213ENST00000618217 COPB1P53618 953 aaKnown RBP24.4■■□□□ 1.5
CBWD3-213ENST00000618217 MYL7Q01449 175 aa24.4■■□□□ 1.5
CBWD3-213ENST00000618217 TRPC3Q13507 836 aa24.4■■□□□ 1.5
CBWD3-213ENST00000618217 LMO3Q8TAP4 145 aa24.4■■□□□ 1.5
CBWD3-213ENST00000618217 TMEM169Q96HH4 297 aa24.4■■□□□ 1.5
CBWD3-213ENST00000618217 VPS16Q9H269 839 aa24.4■■□□□ 1.5
CBWD3-213ENST00000618217 VRTNQ9H8Y1 702 aa24.4■■□□□ 1.5
CBWD3-213ENST00000618217 CERS4Q9HA82 394 aa24.4■■□□□ 1.5
CBWD3-213ENST00000618217 ASS1P00966 412 aaKnown RBP24.39■■□□□ 1.5
CBWD3-213ENST00000618217 ATICP31939 592 aa24.39■■□□□ 1.5
CBWD3-213ENST00000618217 DDX53Q86TM3 631 aaKnown RBP24.39■■□□□ 1.5
CBWD3-213ENST00000618217 ANKRD20A12PQ8NF67 263 aa24.39■■□□□ 1.5
CBWD3-213ENST00000618217 SPPL3Q8TCT6 385 aa24.39■■□□□ 1.5
CBWD3-213ENST00000618217 SUSD3Q96L08 255 aa24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms