RNA–Protein interactions for RNA: ENST00000617564.1

COL4A2-210, Transcript of collagen type IV alpha 2 chain, humanhuman

Gene COL4A2, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-210ENST00000617564 LPAL2Q16609 132 aa13.18□□□□□ -0.3
COL4A2-210ENST00000617564 ME3Q16798 604 aa13.18□□□□□ -0.3
COL4A2-210ENST00000617564 XKR4Q5GH76 650 aa13.18□□□□□ -0.3
COL4A2-210ENST00000617564 PRSS36Q5K4E3 855 aa13.18□□□□□ -0.3
COL4A2-210ENST00000617564 NT5DC1Q5TFE4 455 aa13.18□□□□□ -0.3
COL4A2-210ENST00000617564 LAIR1Q6GTX8 287 aa13.18□□□□□ -0.3
COL4A2-210ENST00000617564 MAMSTRQ6ZN01 415 aa13.18□□□□□ -0.3
COL4A2-210ENST00000617564 NECAB1Q8N987 351 aa13.18□□□□□ -0.3
COL4A2-210ENST00000617564 C3orf58Q8NDZ4 430 aa13.18□□□□□ -0.3
COL4A2-210ENST00000617564 KIFC3Q9BVG8 833 aa13.18□□□□□ -0.3
COL4A2-210ENST00000617564 CCDC94Q9BW85 323 aaPredicted RBP13.18□□□□□ -0.3
COL4A2-210ENST00000617564 CHRDQ9H2X0 955 aa13.18□□□□□ -0.3
COL4A2-210ENST00000617564 HEBP1Q9NRV9 189 aa13.18□□□□□ -0.3
COL4A2-210ENST00000617564 USP20Q9Y2K6 914 aa13.18□□□□□ -0.3
COL4A2-210ENST00000617564 ASH1LQ9NR48 2969 aaKnown RBP13.17□□□□□ -0.3
COL4A2-210ENST00000617564 GCN1Q92616 2671 aaKnown RBP13.17□□□□□ -0.3
COL4A2-210ENST00000617564 SMIM28A0A1B0GU29 152 aa13.17□□□□□ -0.3
COL4A2-210ENST00000617564 WDR27A2RRH5 827 aa13.17□□□□□ -0.3
COL4A2-210ENST00000617564 H7C4K7 107 aa13.17□□□□□ -0.3
COL4A2-210ENST00000617564 LARGE1O95461 756 aa13.17□□□□□ -0.3
COL4A2-210ENST00000617564 RETP07949 1114 aa13.17□□□□□ -0.3
COL4A2-210ENST00000617564 ATF2P15336 505 aa13.17□□□□□ -0.3
COL4A2-210ENST00000617564 BRCC3P46736 316 aa13.17□□□□□ -0.3
COL4A2-210ENST00000617564 NRLP54845 237 aa13.17□□□□□ -0.3
COL4A2-210ENST00000617564 FZD5Q13467 585 aa13.17□□□□□ -0.3
COL4A2-210ENST00000617564 PPP2R5DQ14738 602 aa13.17□□□□□ -0.3
COL4A2-210ENST00000617564 TANGO2Q6ICL3 276 aa13.17□□□□□ -0.3
COL4A2-210ENST00000617564 PDZD4Q76G19 769 aaPredicted RBP13.17□□□□□ -0.3
COL4A2-210ENST00000617564 TCEAL8Q8IYN2 117 aa13.17□□□□□ -0.3
COL4A2-210ENST00000617564 DEPDC1BQ8WUY9 529 aa13.17□□□□□ -0.3
COL4A2-210ENST00000617564 TBC1D32Q96NH3 1257 aa13.17□□□□□ -0.3
COL4A2-210ENST00000617564 PLA2G2FQ9BZM2 168 aa13.17□□□□□ -0.3
COL4A2-210ENST00000617564 CDT1Q9H211 546 aa13.17□□□□□ -0.3
COL4A2-210ENST00000617564 GOLGA2P5Q9HBQ8 144 aa13.17□□□□□ -0.3
COL4A2-210ENST00000617564 ZFP14Q9HCL3 533 aa13.17□□□□□ -0.3
COL4A2-210ENST00000617564 TRPV5Q9NQA5 729 aa13.17□□□□□ -0.3
COL4A2-210ENST00000617564 MAFFQ9ULX9 164 aa13.17□□□□□ -0.3
COL4A2-210ENST00000617564 INSL5Q9Y5Q6 135 aa13.17□□□□□ -0.3
COL4A2-210ENST00000617564 TMEM8BA6NDV4 472 aa13.16□□□□□ -0.3
COL4A2-210ENST00000617564 SHISA7A6NL88 538 aa13.16□□□□□ -0.3
COL4A2-210ENST00000617564 I3L4J1 428 aa13.16□□□□□ -0.3
COL4A2-210ENST00000617564 K7ERI5 159 aa13.16□□□□□ -0.3
COL4A2-210ENST00000617564 PODXLO00592 558 aa13.16□□□□□ -0.3
COL4A2-210ENST00000617564 JAK2O60674 1132 aa13.16□□□□□ -0.3
COL4A2-210ENST00000617564 KCNE1P15382 129 aa13.16□□□□□ -0.3
COL4A2-210ENST00000617564 IGFBP6P24592 240 aaPredicted RBP13.16□□□□□ -0.3
COL4A2-210ENST00000617564 FOSBP53539 338 aa13.16□□□□□ -0.3
COL4A2-210ENST00000617564 MRPL58Q14197 206 aaKnown RBP13.16□□□□□ -0.3
COL4A2-210ENST00000617564 RABEP1Q15276 862 aa13.16□□□□□ -0.3
COL4A2-210ENST00000617564 CSRP2Q16527 193 aa13.16□□□□□ -0.3
COL4A2-210ENST00000617564 ZNF568Q3ZCX4 644 aa13.16□□□□□ -0.3
COL4A2-210ENST00000617564 TPGS2Q68CL5 300 aa13.16□□□□□ -0.3
COL4A2-210ENST00000617564 TSSK4Q6SA08 328 aa13.16□□□□□ -0.3
COL4A2-210ENST00000617564 ALKAL1Q6UXT8 129 aa13.16□□□□□ -0.3
COL4A2-210ENST00000617564 ZNF687Q8N1G0 1237 aa13.16□□□□□ -0.3
COL4A2-210ENST00000617564 ELMOD1Q8N336 334 aa13.16□□□□□ -0.3
COL4A2-210ENST00000617564 LEMD2Q8NC56 503 aa13.16□□□□□ -0.3
COL4A2-210ENST00000617564 IRF7Q92985 503 aa13.16□□□□□ -0.3
COL4A2-210ENST00000617564 ASB16Q96NS5 453 aa13.16□□□□□ -0.3
COL4A2-210ENST00000617564 CORO1BQ9BR76 489 aa13.16□□□□□ -0.3
COL4A2-210ENST00000617564 TRMT61BQ9BVS5 477 aaKnown RBP13.16□□□□□ -0.3
COL4A2-210ENST00000617564 BRD9Q9H8M2 597 aa13.16□□□□□ -0.3
COL4A2-210ENST00000617564 STK24Q9Y6E0 443 aa13.16□□□□□ -0.3
COL4A2-210ENST00000617564 COL4A2P08572 1712 aa13.16□□□□□ -0.3
COL4A2-210ENST00000617564 MCF2P10911 925 aa13.15□□□□□ -0.3
COL4A2-210ENST00000617564 TDGF1P13385 188 aa13.15□□□□□ -0.3
COL4A2-210ENST00000617564 RPL9P32969 192 aaKnown RBP13.15□□□□□ -0.3
COL4A2-210ENST00000617564 CCR3P51677 355 aa13.15□□□□□ -0.3
COL4A2-210ENST00000617564 SOX4Q06945 474 aaPredicted RBP13.15□□□□□ -0.3
COL4A2-210ENST00000617564 MTAPQ13126 283 aa13.15□□□□□ -0.3
COL4A2-210ENST00000617564 FAM78AQ5JUQ0 283 aa13.15□□□□□ -0.3
COL4A2-210ENST00000617564 CYP4A22Q5TCH4 519 aa13.15□□□□□ -0.3
COL4A2-210ENST00000617564 MAP4K3Q8IVH8 894 aa13.15□□□□□ -0.3
COL4A2-210ENST00000617564 CEP120Q8N960 986 aa13.15□□□□□ -0.3
COL4A2-210ENST00000617564 MSANTD3Q96H12 275 aa13.15□□□□□ -0.3
COL4A2-210ENST00000617564 KIF2CQ99661 725 aa13.15□□□□□ -0.3
COL4A2-210ENST00000617564 ACO2Q99798 780 aaKnown RBP13.15□□□□□ -0.3
COL4A2-210ENST00000617564 MRPL4Q9BYD3 311 aaKnown RBP13.15□□□□□ -0.3
COL4A2-210ENST00000617564 BHMT2Q9H2M3 363 aa13.15□□□□□ -0.3
COL4A2-210ENST00000617564 TMEM134Q9H6X4 195 aa13.15□□□□□ -0.3
COL4A2-210ENST00000617564 CYP4F11Q9HBI6 524 aa13.15□□□□□ -0.3
COL4A2-210ENST00000617564 PTPRHQ9HD43 1115 aa13.15□□□□□ -0.3
COL4A2-210ENST00000617564 CNTN3Q9P232 1028 aa13.15□□□□□ -0.3
COL4A2-210ENST00000617564 AFF4Q9UHB7 1163 aaKnown RBP13.15□□□□□ -0.3
COL4A2-210ENST00000617564 FBXL5Q9UKA1 691 aa13.15□□□□□ -0.3
COL4A2-210ENST00000617564 NUB1Q9Y5A7 615 aa13.15□□□□□ -0.3
COL4A2-210ENST00000617564 CNOT1A5YKK6 2376 aaKnown RBP13.15□□□□□ -0.3
COL4A2-210ENST00000617564 FOXD2O60548 495 aaPredicted RBP13.14□□□□□ -0.31
COL4A2-210ENST00000617564 PSMC3P17980 439 aa13.14□□□□□ -0.31
COL4A2-210ENST00000617564 CCT6AP40227 531 aaKnown RBP13.14□□□□□ -0.31
COL4A2-210ENST00000617564 TRAPPC10P48553 1259 aa13.14□□□□□ -0.31
COL4A2-210ENST00000617564 EPHA5P54756 1037 aa13.14□□□□□ -0.31
COL4A2-210ENST00000617564 DMP1Q13316 513 aaPredicted RBP13.14□□□□□ -0.31
COL4A2-210ENST00000617564 GRM2Q14416 872 aa13.14□□□□□ -0.31
COL4A2-210ENST00000617564 IQCEQ6IPM2 695 aa13.14□□□□□ -0.31
COL4A2-210ENST00000617564 ZNF280DQ6N043 979 aa13.14□□□□□ -0.31
COL4A2-210ENST00000617564 C1orf228Q6PIY5 440 aa13.14□□□□□ -0.31
COL4A2-210ENST00000617564 CELF5Q8N6W0 485 aaKnown RBP13.14□□□□□ -0.31
COL4A2-210ENST00000617564 APPL2Q8NEU8 664 aa13.14□□□□□ -0.31
COL4A2-210ENST00000617564 FAM3CQ92520 227 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms