RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 TGS1Q96RS0 853 aaKnown RBP16.85■□□□□ 0.29
PCDHGC3-204ENST00000617222 TAB2Q9NYJ8 693 aa16.85■□□□□ 0.29
PCDHGC3-204ENST00000617222 SPG21Q9NZD8 308 aa16.85■□□□□ 0.29
PCDHGC3-204ENST00000617222 MTUS1Q9ULD2 1270 aa16.85■□□□□ 0.29
PCDHGC3-204ENST00000617222 RWDD3Q9Y3V2 267 aa16.85■□□□□ 0.29
PCDHGC3-204ENST00000617222 TADA2AO75478 443 aa16.84■□□□□ 0.29
PCDHGC3-204ENST00000617222 VNN1O95497 513 aa16.84■□□□□ 0.29
PCDHGC3-204ENST00000617222 FMO5P49326 533 aa16.84■□□□□ 0.29
PCDHGC3-204ENST00000617222 MXI1P50539 228 aa16.84■□□□□ 0.29
PCDHGC3-204ENST00000617222 ERVK-21P61565 698 aa16.84■□□□□ 0.29
PCDHGC3-204ENST00000617222 CBWD6Q4V339 395 aa16.84■□□□□ 0.29
PCDHGC3-204ENST00000617222 VWA3BQ502W6 1294 aa16.84■□□□□ 0.29
PCDHGC3-204ENST00000617222 CBWD3Q5JTY5 395 aa16.84■□□□□ 0.29
PCDHGC3-204ENST00000617222 CBWD5Q5RIA9 395 aa16.84■□□□□ 0.29
PCDHGC3-204ENST00000617222 KRT39Q6A163 491 aa16.84■□□□□ 0.29
PCDHGC3-204ENST00000617222 CD300LGQ6UXG3 332 aa16.84■□□□□ 0.29
PCDHGC3-204ENST00000617222 TMEM173Q86WV6 379 aaPredicted RBP16.84■□□□□ 0.29
PCDHGC3-204ENST00000617222 SLC39A11Q8N1S5 342 aa16.84■□□□□ 0.29
PCDHGC3-204ENST00000617222 C3orf58Q8NDZ4 430 aa16.84■□□□□ 0.29
PCDHGC3-204ENST00000617222 HASPINQ8TF76 798 aa16.84■□□□□ 0.29
PCDHGC3-204ENST00000617222 BCL7CQ8WUZ0 217 aaPredicted RBP16.84■□□□□ 0.29
PCDHGC3-204ENST00000617222 IGSF21Q96ID5 467 aa16.84■□□□□ 0.29
PCDHGC3-204ENST00000617222 VPS16Q9H269 839 aa16.84■□□□□ 0.29
PCDHGC3-204ENST00000617222 CERS4Q9HA82 394 aa16.84■□□□□ 0.29
PCDHGC3-204ENST00000617222 MARCH5Q9NX47 278 aa16.84■□□□□ 0.29
PCDHGC3-204ENST00000617222 LIMA1Q9UHB6 759 aaKnown RBP16.84■□□□□ 0.29
PCDHGC3-204ENST00000617222 TRIP11Q15643 1979 aa16.84■□□□□ 0.29
PCDHGC3-204ENST00000617222 CARNS1A5YM72 827 aa16.83■□□□□ 0.28
PCDHGC3-204ENST00000617222 PES1O00541 588 aaKnown RBP16.83■□□□□ 0.28
PCDHGC3-204ENST00000617222 KIF4AO95239 1232 aa16.83■□□□□ 0.28
PCDHGC3-204ENST00000617222 HLA-DRAP01903 254 aa16.83■□□□□ 0.28
PCDHGC3-204ENST00000617222 ITGB1P05556 798 aa16.83■□□□□ 0.28
PCDHGC3-204ENST00000617222 COPB1P53618 953 aaKnown RBP16.83■□□□□ 0.28
PCDHGC3-204ENST00000617222 MYL6P60660 151 aa16.83■□□□□ 0.28
PCDHGC3-204ENST00000617222 NCOA4Q13772 614 aa16.83■□□□□ 0.28
PCDHGC3-204ENST00000617222 EPC2Q52LR7 807 aa16.83■□□□□ 0.28
PCDHGC3-204ENST00000617222 MIIPQ5JXC2 388 aa16.83■□□□□ 0.28
PCDHGC3-204ENST00000617222 KLHL23Q8NBE8 558 aa16.83■□□□□ 0.28
PCDHGC3-204ENST00000617222 TAS1R2Q8TE23 839 aa16.83■□□□□ 0.28
PCDHGC3-204ENST00000617222 SAMD11Q96NU1 681 aa16.83■□□□□ 0.28
PCDHGC3-204ENST00000617222 RBSNQ9H1K0 784 aa16.83■□□□□ 0.28
PCDHGC3-204ENST00000617222 NDST4Q9H3R1 872 aa16.83■□□□□ 0.28
PCDHGC3-204ENST00000617222 NUB1Q9Y5A7 615 aa16.83■□□□□ 0.28
PCDHGC3-204ENST00000617222 TMEM189-UBE2V1I3L0A0 370 aa16.82■□□□□ 0.28
PCDHGC3-204ENST00000617222 SOX1O00570 391 aaPredicted RBP16.82■□□□□ 0.28
PCDHGC3-204ENST00000617222 SPTLC1O15269 473 aa16.82■□□□□ 0.28
PCDHGC3-204ENST00000617222 N4BP1O75113 896 aaKnown RBP16.82■□□□□ 0.28
PCDHGC3-204ENST00000617222 FGF18O76093 207 aa16.82■□□□□ 0.28
PCDHGC3-204ENST00000617222 RB1P06400 928 aa16.82■□□□□ 0.28
PCDHGC3-204ENST00000617222 TPM2P07951 284 aa16.82■□□□□ 0.28
PCDHGC3-204ENST00000617222 PPM1AP35813 382 aa16.82■□□□□ 0.28
PCDHGC3-204ENST00000617222 PIK3CAP42336 1068 aa16.82■□□□□ 0.28
PCDHGC3-204ENST00000617222 BRCC3P46736 316 aa16.82■□□□□ 0.28
PCDHGC3-204ENST00000617222 TAF6P49848 677 aa16.82■□□□□ 0.28
PCDHGC3-204ENST00000617222 LILRA4P59901 499 aa16.82■□□□□ 0.28
PCDHGC3-204ENST00000617222 MYL7Q01449 175 aa16.82■□□□□ 0.28
PCDHGC3-204ENST00000617222 ARNTL2Q8WYA1 636 aa16.82■□□□□ 0.28
PCDHGC3-204ENST00000617222 SEMA4DQ92854 862 aa16.82■□□□□ 0.28
PCDHGC3-204ENST00000617222 ELMO3Q96BJ8 720 aa16.82■□□□□ 0.28
PCDHGC3-204ENST00000617222 TMEM169Q96HH4 297 aa16.82■□□□□ 0.28
PCDHGC3-204ENST00000617222 HPDLQ96IR7 371 aa16.82■□□□□ 0.28
PCDHGC3-204ENST00000617222 PLVAPQ9BX97 442 aa16.82■□□□□ 0.28
PCDHGC3-204ENST00000617222 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.82■□□□□ 0.28
PCDHGC3-204ENST00000617222 ADAM28Q9UKQ2 775 aa16.82■□□□□ 0.28
PCDHGC3-204ENST00000617222 TRIOBPQ9H2D6 2365 aa16.81■□□□□ 0.28
PCDHGC3-204ENST00000617222 LRRC10BA6NIK2 292 aa16.81■□□□□ 0.28
PCDHGC3-204ENST00000617222 I3L4J1 428 aa16.81■□□□□ 0.28
PCDHGC3-204ENST00000617222 PMM2O15305 246 aa16.81■□□□□ 0.28
PCDHGC3-204ENST00000617222 P4HA2O15460 535 aa16.81■□□□□ 0.28
PCDHGC3-204ENST00000617222 LRRN2O75325 713 aa16.81■□□□□ 0.28
PCDHGC3-204ENST00000617222 CLSTN1O94985 981 aa16.81■□□□□ 0.28
PCDHGC3-204ENST00000617222 PNPLA4P41247 253 aa16.81■□□□□ 0.28
PCDHGC3-204ENST00000617222 KRT17Q04695 432 aa16.81■□□□□ 0.28
PCDHGC3-204ENST00000617222 CETN1Q12798 172 aa16.81■□□□□ 0.28
PCDHGC3-204ENST00000617222 MYO1EQ12965 1108 aa16.81■□□□□ 0.28
PCDHGC3-204ENST00000617222 SGSM1Q2NKQ1 1148 aa16.81■□□□□ 0.28
PCDHGC3-204ENST00000617222 TIGD5Q53EQ6 642 aa16.81■□□□□ 0.28
PCDHGC3-204ENST00000617222 LRRC52Q8N7C0 313 aa16.81■□□□□ 0.28
PCDHGC3-204ENST00000617222 FBXL13Q8NEE6 735 aa16.81■□□□□ 0.28
PCDHGC3-204ENST00000617222 FBXO22Q8NEZ5 403 aa16.81■□□□□ 0.28
PCDHGC3-204ENST00000617222 ZNF560Q96MR9 790 aa16.81■□□□□ 0.28
PCDHGC3-204ENST00000617222 PI4K2AQ9BTU6 479 aa16.81■□□□□ 0.28
PCDHGC3-204ENST00000617222 GPR62Q9BZJ7 368 aa16.81■□□□□ 0.28
PCDHGC3-204ENST00000617222 RAB20Q9NX57 234 aa16.81■□□□□ 0.28
PCDHGC3-204ENST00000617222 COQ4Q9Y3A0 265 aa16.81■□□□□ 0.28
PCDHGC3-204ENST00000617222 ANK1P16157 1881 aa16.81■□□□□ 0.28
PCDHGC3-204ENST00000617222 RALGAPA2Q2PPJ7 1873 aa16.81■□□□□ 0.28
PCDHGC3-204ENST00000617222 KPNA7A9QM74 516 aa16.8■□□□□ 0.28
PCDHGC3-204ENST00000617222 C5orf67F2Z3F1 127 aa16.8■□□□□ 0.28
PCDHGC3-204ENST00000617222 SERPINC1P01008 464 aa16.8■□□□□ 0.28
PCDHGC3-204ENST00000617222 ATICP31939 592 aa16.8■□□□□ 0.28
PCDHGC3-204ENST00000617222 FANCCQ00597 558 aa16.8■□□□□ 0.28
PCDHGC3-204ENST00000617222 PLCB3Q01970 1234 aa16.8■□□□□ 0.28
PCDHGC3-204ENST00000617222 SV2CQ496J9 727 aa16.8■□□□□ 0.28
PCDHGC3-204ENST00000617222 FUT10Q6P4F1 479 aa16.8■□□□□ 0.28
PCDHGC3-204ENST00000617222 DSTYKQ6XUX3 929 aa16.8■□□□□ 0.28
PCDHGC3-204ENST00000617222 TAS1R1Q7RTX1 841 aa16.8■□□□□ 0.28
PCDHGC3-204ENST00000617222 APTXQ7Z2E3 356 aaKnown RBP16.8■□□□□ 0.28
PCDHGC3-204ENST00000617222 SENP8Q96LD8 212 aa16.8■□□□□ 0.28
PCDHGC3-204ENST00000617222 CRACR2AQ9BSW2 395 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms