RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 CHST7Q9NS84 486 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 GINM1Q9NU53 330 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 FAM53CQ9NYF3 392 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 MAP3K20Q9NYL2 800 aaKnown RBP5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 GGT7Q9UJ14 662 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 HEY1Q9Y5J3 304 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 NDC80O14777 642 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 EDIL3O43854 480 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 PRKCBP05771 671 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 MYBL1P10243 752 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 MAPTP10636 758 aaKnown RBP5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 ATP11AP98196 1134 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 CUL2Q13617 745 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 SGSM1Q2NKQ1 1148 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 FAM102AQ5T9C2 384 aaPredicted RBP5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 GPAT2Q6NUI2 795 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 TRIM50Q86XT4 487 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 TBC1D31Q96DN5 1066 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 HEXIM2Q96MH2 286 aaKnown RBP5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 KREMEN1Q96MU8 473 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 CYTH2Q99418 400 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 APOL6Q9BWW8 343 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 PARVAQ9NVD7 372 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 NUB1Q9Y5A7 615 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 SLC8A1P32418 973 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 HOXD13P35453 343 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 PCK1P35558 622 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 CDH6P55285 790 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 KRT81Q14533 505 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 ZC3H18Q86VM9 953 aaKnown RBP5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 ZNF677Q86XU0 584 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 RFX6Q8HWS3 928 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 ABRAQ8N0Z2 381 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 RAPGEF5Q92565 580 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 SEC16BQ96JE7 1060 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 ROPN1BQ9BZX4 212 aaPredicted RBP5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 ROPN1Q9HAT0 212 aaPredicted RBP5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 XPNPEP1Q9NQW7 623 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 SENP1Q9P0U3 644 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 IP6K2Q9UHH9 426 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 CEP250Q9BV73 2442 aa5.97□□□□□ -1.45
SYNCRIP-204ENST00000616122 AP3M2P53677 418 aa5.96□□□□□ -1.45
SYNCRIP-204ENST00000616122 EXOC8Q8IYI6 725 aa5.96□□□□□ -1.45
SYNCRIP-204ENST00000616122 LRRC34Q8IZ02 419 aa5.96□□□□□ -1.45
SYNCRIP-204ENST00000616122 MCOLN2Q8IZK6 566 aa5.96□□□□□ -1.45
SYNCRIP-204ENST00000616122 PRPF31Q8WWY3 499 aaKnown RBP5.96□□□□□ -1.45
SYNCRIP-204ENST00000616122 KLF6Q99612 283 aaPredicted RBP5.96□□□□□ -1.45
SYNCRIP-204ENST00000616122 SIX2Q9NPC8 291 aa5.96□□□□□ -1.45
SYNCRIP-204ENST00000616122 COL20A1Q9P218 1284 aa5.96□□□□□ -1.45
SYNCRIP-204ENST00000616122 HACL1Q9UJ83 578 aa5.96□□□□□ -1.45
SYNCRIP-204ENST00000616122 NEU2Q9Y3R4 380 aa5.96□□□□□ -1.45
SYNCRIP-204ENST00000616122 LMO7Q8WWI1 1683 aa5.96□□□□□ -1.45
SYNCRIP-204ENST00000616122 BTNL10A8MVZ5 291 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 TCP11X1B4DZS4 312 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 EXTL3O43909 919 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 ADCY3O60266 1144 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 RPS6KA5O75582 802 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 RPL21P46778 160 aaKnown RBP5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 FMO1Q01740 532 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 MYO1EQ12965 1108 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 KIF22Q14807 665 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 DUPD1Q68J44 220 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 ZNF449Q6P9G9 518 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 ATP11CQ8NB49 1132 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 FEZF2Q8TBJ5 459 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 EPS8L3Q8TE67 593 aaKnown RBP5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 SENP7Q9BQF6 1050 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 PPP1R12CQ9BZL4 782 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 C2orf40Q9H1Z8 148 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 ST6GALNAC4Q9H4F1 302 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 MED7O43513 233 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 GTF2H1P32780 548 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 MAGEA4P43358 317 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 IREB2P48200 963 aaKnown RBP5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 AADACL2Q6P093 401 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 LLGL2Q6P1M3 1020 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 DARS2Q6PI48 645 aaKnown RBP5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 PPM1NQ8N819 430 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 PCDHB18PQ96TA0 734 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 AVENQ9NQS1 362 aaPredicted RBP5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 WDR35Q9P2L0 1181 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 RIPK3Q9Y572 518 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 MYH10P35580 1976 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 SLIT2O94813 1529 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 I3L4J1 428 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 CLCN3P51790 818 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 MYL6P60660 151 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 SNCBQ16143 134 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 P3H1Q32P28 736 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 IER5Q5VY09 327 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 CCDC62Q6P9F0 684 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 APOBEC3FQ8IUX4 373 aaKnown RBP5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 CEP120Q8N960 986 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 KCTD6Q8NC69 237 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 AGAP1Q9UPQ3 857 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 PCDHA3Q9Y5H8 950 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 CAPN9O14815 690 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 OATP04181 439 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 SUPT20HL2P0C7V6 817 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 PHKA2P46019 1235 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms