RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 PCDHB2Q9Y5E7 798 aa11.67□□□□□ -0.54
COL4A1-205ENST00000615732 PCDHB13Q9Y5F0 798 aa11.67□□□□□ -0.54
COL4A1-205ENST00000615732 PRR23AA6NEV1 266 aa11.66□□□□□ -0.54
COL4A1-205ENST00000615732 SPDYE4A6NLX3 237 aa11.66□□□□□ -0.54
COL4A1-205ENST00000615732 STX10O60499 249 aa11.66□□□□□ -0.54
COL4A1-205ENST00000615732 CTSAP10619 480 aa11.66□□□□□ -0.54
COL4A1-205ENST00000615732 MAPTP10636 758 aaKnown RBP11.66□□□□□ -0.54
COL4A1-205ENST00000615732 NR2F2P24468 414 aa11.66□□□□□ -0.54
COL4A1-205ENST00000615732 NMT1P30419 496 aaKnown RBP11.66□□□□□ -0.54
COL4A1-205ENST00000615732 CASP14P31944 242 aa11.66□□□□□ -0.54
COL4A1-205ENST00000615732 RAB27AP51159 221 aa11.66□□□□□ -0.54
COL4A1-205ENST00000615732 ADAM9Q13443 819 aa11.66□□□□□ -0.54
COL4A1-205ENST00000615732 EMC2Q15006 297 aa11.66□□□□□ -0.54
COL4A1-205ENST00000615732 PTPN14Q15678 1187 aa11.66□□□□□ -0.54
COL4A1-205ENST00000615732 KIAA1841Q6NSI8 718 aa11.66□□□□□ -0.54
COL4A1-205ENST00000615732 HS2ST1Q7LGA3 356 aa11.66□□□□□ -0.54
COL4A1-205ENST00000615732 DDX53Q86TM3 631 aaKnown RBP11.66□□□□□ -0.54
COL4A1-205ENST00000615732 SYCP3Q8IZU3 236 aa11.66□□□□□ -0.54
COL4A1-205ENST00000615732 TDRD5Q8NAT2 981 aaKnown RBP11.66□□□□□ -0.54
COL4A1-205ENST00000615732 GOLGA5Q8TBA6 731 aa11.66□□□□□ -0.54
COL4A1-205ENST00000615732 PSPC1Q8WXF1 523 aaKnown RBP11.66□□□□□ -0.54
COL4A1-205ENST00000615732 NDST4Q9H3R1 872 aa11.66□□□□□ -0.54
COL4A1-205ENST00000615732 POLD4Q9HCU8 107 aa11.66□□□□□ -0.54
COL4A1-205ENST00000615732 TRAF3IP3Q9Y228 551 aa11.66□□□□□ -0.54
COL4A1-205ENST00000615732 C2CD2LO14523 706 aa11.65□□□□□ -0.54
COL4A1-205ENST00000615732 SLC16A3O15427 465 aaKnown RBP11.65□□□□□ -0.54
COL4A1-205ENST00000615732 DDHD2O94830 711 aa11.65□□□□□ -0.54
COL4A1-205ENST00000615732 POMCP01189 267 aa11.65□□□□□ -0.54
COL4A1-205ENST00000615732 NR3C1P04150 777 aa11.65□□□□□ -0.54
COL4A1-205ENST00000615732 GYPCP04921 128 aa11.65□□□□□ -0.54
COL4A1-205ENST00000615732 SKIP12755 728 aa11.65□□□□□ -0.54
COL4A1-205ENST00000615732 PLS3P13797 630 aa11.65□□□□□ -0.54
COL4A1-205ENST00000615732 TRIM21P19474 475 aaKnown RBP11.65□□□□□ -0.54
COL4A1-205ENST00000615732 NBL1P41271 181 aa11.65□□□□□ -0.54
COL4A1-205ENST00000615732 MTHFRP42898 656 aa11.65□□□□□ -0.54
COL4A1-205ENST00000615732 LAMTOR4Q0VGL1 99 aa11.65□□□□□ -0.54
COL4A1-205ENST00000615732 BMS1Q14692 1282 aaKnown RBP11.65□□□□□ -0.54
COL4A1-205ENST00000615732 SYCP1Q15431 976 aa11.65□□□□□ -0.54
COL4A1-205ENST00000615732 MIIPQ5JXC2 388 aa11.65□□□□□ -0.54
COL4A1-205ENST00000615732 UBXN11Q5T124 520 aa11.65□□□□□ -0.54
COL4A1-205ENST00000615732 CEP135Q66GS9 1140 aa11.65□□□□□ -0.54
COL4A1-205ENST00000615732 ZC3H3Q8IXZ2 948 aaKnown RBP11.65□□□□□ -0.54
COL4A1-205ENST00000615732 ZDHHC14Q8IZN3 488 aa11.65□□□□□ -0.54
COL4A1-205ENST00000615732 CCAR2Q8N163 923 aaKnown RBP11.65□□□□□ -0.54
COL4A1-205ENST00000615732 RNF149Q8NC42 400 aa11.65□□□□□ -0.54
COL4A1-205ENST00000615732 URGCPQ8TCY9 931 aa11.65□□□□□ -0.54
COL4A1-205ENST00000615732 SLC22A17Q8WUG5 538 aa11.65□□□□□ -0.54
COL4A1-205ENST00000615732 PRPF31Q8WWY3 499 aaKnown RBP11.65□□□□□ -0.54
COL4A1-205ENST00000615732 ERGIC2Q96RQ1 377 aa11.65□□□□□ -0.54
COL4A1-205ENST00000615732 JPH2Q9BR39 696 aaPredicted RBP11.65□□□□□ -0.54
COL4A1-205ENST00000615732 TRAIPQ9BWF2 469 aa11.65□□□□□ -0.54
COL4A1-205ENST00000615732 APOL6Q9BWW8 343 aa11.65□□□□□ -0.54
COL4A1-205ENST00000615732 INO80BQ9C086 356 aaPredicted RBP11.65□□□□□ -0.54
COL4A1-205ENST00000615732 DHX33Q9H6R0 707 aaKnown RBP11.65□□□□□ -0.54
COL4A1-205ENST00000615732 RSAD1Q9HA92 442 aa11.65□□□□□ -0.54
COL4A1-205ENST00000615732 DZANK1Q9NVP4 752 aa11.65□□□□□ -0.54
COL4A1-205ENST00000615732 TRMT1Q9NXH9 659 aaKnown RBP11.65□□□□□ -0.54
COL4A1-205ENST00000615732 LIMD1Q9UGP4 676 aa11.65□□□□□ -0.54
COL4A1-205ENST00000615732 PRG3Q9Y2Y8 225 aaPredicted RBP11.65□□□□□ -0.54
COL4A1-205ENST00000615732 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.65□□□□□ -0.54
COL4A1-205ENST00000615732 SPTBN4Q9H254 2564 aa11.65□□□□□ -0.55
COL4A1-205ENST00000615732 F8W810 466 aa11.64□□□□□ -0.55
COL4A1-205ENST00000615732 KIF2AO00139 706 aaPredicted RBP11.64□□□□□ -0.55
COL4A1-205ENST00000615732 ZSCAN12O43309 604 aa11.64□□□□□ -0.55
COL4A1-205ENST00000615732 HOXA11P31270 313 aaPredicted RBP11.64□□□□□ -0.55
COL4A1-205ENST00000615732 KRT9P35527 623 aa11.64□□□□□ -0.55
COL4A1-205ENST00000615732 CDC42EP1Q00587 391 aa11.64□□□□□ -0.55
COL4A1-205ENST00000615732 PPP2R3AQ06190 1150 aa11.64□□□□□ -0.55
COL4A1-205ENST00000615732 MAPK7Q13164 816 aa11.64□□□□□ -0.55
COL4A1-205ENST00000615732 DMP1Q13316 513 aaPredicted RBP11.64□□□□□ -0.55
COL4A1-205ENST00000615732 CWF19L1Q69YN2 538 aaKnown RBP11.64□□□□□ -0.55
COL4A1-205ENST00000615732 ASTLQ6HA08 431 aaPredicted RBP11.64□□□□□ -0.55
COL4A1-205ENST00000615732 ZNF720Q7Z2F6 126 aa11.64□□□□□ -0.55
COL4A1-205ENST00000615732 FRMD5Q7Z6J6 570 aa11.64□□□□□ -0.55
COL4A1-205ENST00000615732 MCPH1Q8NEM0 835 aa11.64□□□□□ -0.55
COL4A1-205ENST00000615732 ZNF397Q8NF99 534 aaPredicted RBP11.64□□□□□ -0.55
COL4A1-205ENST00000615732 PGBD4Q96DM1 585 aa11.64□□□□□ -0.55
COL4A1-205ENST00000615732 CPB2Q96IY4 423 aa11.64□□□□□ -0.55
COL4A1-205ENST00000615732 C16orf45Q96MC5 204 aaPredicted RBP11.64□□□□□ -0.55
COL4A1-205ENST00000615732 ACCSQ96QU6 501 aa11.64□□□□□ -0.55
COL4A1-205ENST00000615732 EIF2AQ9BY44 585 aaKnown RBP11.64□□□□□ -0.55
COL4A1-205ENST00000615732 TMEM206Q9H813 350 aa11.64□□□□□ -0.55
COL4A1-205ENST00000615732 METTL14Q9HCE5 456 aaKnown RBP11.64□□□□□ -0.55
COL4A1-205ENST00000615732 KCND1Q9NSA2 647 aa11.64□□□□□ -0.55
COL4A1-205ENST00000615732 ZNHIT6Q9NWK9 470 aaKnown RBP11.64□□□□□ -0.55
COL4A1-205ENST00000615732 ARMCX3Q9UH62 379 aaPredicted RBP11.64□□□□□ -0.55
COL4A1-205ENST00000615732 LUC7L2Q9Y383 392 aaKnown RBP11.64□□□□□ -0.55
COL4A1-205ENST00000615732 HES2Q9Y543 173 aa11.64□□□□□ -0.55
COL4A1-205ENST00000615732 MYO10Q9HD67 2058 aa11.64□□□□□ -0.55
COL4A1-205ENST00000615732 GOLGA6L9A6NEM1 432 aa11.63□□□□□ -0.55
COL4A1-205ENST00000615732 CCDC169A6NNP5 214 aa11.63□□□□□ -0.55
COL4A1-205ENST00000615732 CLIC2O15247 247 aa11.63□□□□□ -0.55
COL4A1-205ENST00000615732 ZNF623O75123 536 aa11.63□□□□□ -0.55
COL4A1-205ENST00000615732 DGAT1O75907 488 aa11.63□□□□□ -0.55
COL4A1-205ENST00000615732 ERLIN2O94905 339 aa11.63□□□□□ -0.55
COL4A1-205ENST00000615732 CNPP09543 421 aaKnown RBP11.63□□□□□ -0.55
COL4A1-205ENST00000615732 TNNT1P13805 278 aa11.63□□□□□ -0.55
COL4A1-205ENST00000615732 MLH1P40692 756 aa11.63□□□□□ -0.55
COL4A1-205ENST00000615732 RFC5P40937 340 aa11.63□□□□□ -0.55
COL4A1-205ENST00000615732 SMTNP53814 917 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms