RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 SRGAP2BP0DMP2 458 aa18.14■□□□□ 0.49
CBWD3-211ENST00000615061 MCM4P33991 863 aa18.14■□□□□ 0.49
CBWD3-211ENST00000615061 FAM160A1Q05DH4 1040 aa18.14■□□□□ 0.49
CBWD3-211ENST00000615061 KNOP1Q1ED39 458 aaKnown RBP18.14■□□□□ 0.49
CBWD3-211ENST00000615061 CLSTN3Q9BQT9 956 aa18.14■□□□□ 0.49
CBWD3-211ENST00000615061 USP15Q9Y4E8 981 aaPredicted RBP18.14■□□□□ 0.49
CBWD3-211ENST00000615061 TRAPPC3O43617 180 aa18.13■□□□□ 0.49
CBWD3-211ENST00000615061 WEE2P0C1S8 567 aa18.13■□□□□ 0.49
CBWD3-211ENST00000615061 SMAD2Q15796 467 aaKnown RBP18.13■□□□□ 0.49
CBWD3-211ENST00000615061 SCARA3Q6AZY7 606 aa18.13■□□□□ 0.49
CBWD3-211ENST00000615061 RSPO2Q6UXX9 243 aaPredicted RBP18.13■□□□□ 0.49
CBWD3-211ENST00000615061 PPFIBP1Q86W92 1011 aa18.13■□□□□ 0.49
CBWD3-211ENST00000615061 GPR65Q8IYL9 337 aa18.13■□□□□ 0.49
CBWD3-211ENST00000615061 RDH13Q8NBN7 331 aa18.13■□□□□ 0.49
CBWD3-211ENST00000615061 BEST2Q8NFU1 509 aa18.13■□□□□ 0.49
CBWD3-211ENST00000615061 FBXL18Q96ME1 805 aa18.13■□□□□ 0.49
CBWD3-211ENST00000615061 PDE11AQ9HCR9 933 aa18.13■□□□□ 0.49
CBWD3-211ENST00000615061 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.13■□□□□ 0.49
CBWD3-211ENST00000615061 FNIP2Q9P278 1114 aa18.13■□□□□ 0.49
CBWD3-211ENST00000615061 C2CD2Q9Y426 696 aa18.13■□□□□ 0.49
CBWD3-211ENST00000615061 TGM5O43548 720 aa18.12■□□□□ 0.49
CBWD3-211ENST00000615061 XPOTO43592 962 aaKnown RBP18.12■□□□□ 0.49
CBWD3-211ENST00000615061 RHOBTB3O94955 611 aa18.12■□□□□ 0.49
CBWD3-211ENST00000615061 CYP2J2P51589 502 aa18.12■□□□□ 0.49
CBWD3-211ENST00000615061 POU5F1Q01860 360 aaKnown RBP18.12■□□□□ 0.49
CBWD3-211ENST00000615061 PSMD2Q13200 908 aa18.12■□□□□ 0.49
CBWD3-211ENST00000615061 PUS10Q3MIT2 529 aaKnown RBP18.12■□□□□ 0.49
CBWD3-211ENST00000615061 C9orf57Q5W0N0 161 aa18.12■□□□□ 0.49
CBWD3-211ENST00000615061 LMBRD2Q68DH5 695 aaPredicted RBP18.12■□□□□ 0.49
CBWD3-211ENST00000615061 SUSD3Q96L08 255 aa18.12■□□□□ 0.49
CBWD3-211ENST00000615061 CD320Q9NPF0 282 aa18.12■□□□□ 0.49
CBWD3-211ENST00000615061 MAPK8IP1Q9UQF2 711 aa18.12■□□□□ 0.49
CBWD3-211ENST00000615061 DERAQ9Y315 318 aa18.12■□□□□ 0.49
CBWD3-211ENST00000615061 SPTLC1O15269 473 aa18.12■□□□□ 0.49
CBWD3-211ENST00000615061 IL18RAPO95256 599 aa18.12■□□□□ 0.49
CBWD3-211ENST00000615061 GLUD1P00367 558 aa18.12■□□□□ 0.49
CBWD3-211ENST00000615061 VARS2Q5ST30 1063 aaKnown RBP18.12■□□□□ 0.49
CBWD3-211ENST00000615061 RARS2Q5T160 578 aaKnown RBP18.12■□□□□ 0.49
CBWD3-211ENST00000615061 HS2ST1Q7LGA3 356 aa18.12■□□□□ 0.49
CBWD3-211ENST00000615061 TSPAN18Q96SJ8 248 aa18.12■□□□□ 0.49
CBWD3-211ENST00000615061 MAN1C1Q9NR34 630 aa18.12■□□□□ 0.49
CBWD3-211ENST00000615061 DPP3Q9NY33 737 aa18.12■□□□□ 0.49
CBWD3-211ENST00000615061 TIMM13Q9Y5L4 95 aaPredicted RBP18.12■□□□□ 0.49
CBWD3-211ENST00000615061 PTPRJQ12913 1337 aa18.11■□□□□ 0.49
CBWD3-211ENST00000615061 HOXB8P17481 243 aaPredicted RBP18.11■□□□□ 0.49
CBWD3-211ENST00000615061 TFAMQ00059 246 aaKnown RBP18.11■□□□□ 0.49
CBWD3-211ENST00000615061 TMC5Q6UXY8 1006 aa18.11■□□□□ 0.49
CBWD3-211ENST00000615061 SMYD4Q8IYR2 804 aaPredicted RBP18.11■□□□□ 0.49
CBWD3-211ENST00000615061 SUSD6Q92537 303 aa18.11■□□□□ 0.49
CBWD3-211ENST00000615061 KCTD10Q9H3F6 313 aa18.11■□□□□ 0.49
CBWD3-211ENST00000615061 MTRRQ9UBK8 725 aa18.11■□□□□ 0.49
CBWD3-211ENST00000615061 CDY1Q9Y6F8 540 aa18.11■□□□□ 0.49
CBWD3-211ENST00000615061 ANO9A1A5B4 782 aa18.1■□□□□ 0.49
CBWD3-211ENST00000615061 ZNF233A6NK53 670 aa18.1■□□□□ 0.49
CBWD3-211ENST00000615061 PIRO00625 290 aa18.1■□□□□ 0.49
CBWD3-211ENST00000615061 KIAA0391O15091 583 aaKnown RBP18.1■□□□□ 0.49
CBWD3-211ENST00000615061 OR1D2P34982 312 aa18.1■□□□□ 0.49
CBWD3-211ENST00000615061 AARSP49588 968 aaKnown RBP eCLIP18.1■□□□□ 0.49
CBWD3-211ENST00000615061 LILRA4P59901 499 aa18.1■□□□□ 0.49
CBWD3-211ENST00000615061 SNRNP35Q16560 246 aaKnown RBP18.1■□□□□ 0.49
CBWD3-211ENST00000615061 LILRA6Q6PI73 481 aa18.1■□□□□ 0.49
CBWD3-211ENST00000615061 DZANK1Q9NVP4 752 aa18.1■□□□□ 0.49
CBWD3-211ENST00000615061 TSC2P49815 1807 aa18.1■□□□□ 0.49
CBWD3-211ENST00000615061 SPDYE4A6NLX3 237 aa18.09■□□□□ 0.49
CBWD3-211ENST00000615061 SYN3O14994 580 aa18.09■□□□□ 0.49
CBWD3-211ENST00000615061 RFPL2O75678 378 aa18.09■□□□□ 0.49
CBWD3-211ENST00000615061 KCNB1Q14721 858 aa18.09■□□□□ 0.49
CBWD3-211ENST00000615061 ANKS3Q6ZW76 656 aa18.09■□□□□ 0.49
CBWD3-211ENST00000615061 C1orf127Q8N9H9 656 aa18.09■□□□□ 0.49
CBWD3-211ENST00000615061 XXYLT1Q8NBI6 393 aa18.09■□□□□ 0.49
CBWD3-211ENST00000615061 MTMR12Q9C0I1 747 aa18.09■□□□□ 0.49
CBWD3-211ENST00000615061 ADAM7Q9H2U9 754 aa18.09■□□□□ 0.49
CBWD3-211ENST00000615061 FAM50BQ9Y247 325 aa18.09■□□□□ 0.49
CBWD3-211ENST00000615061 MYO10Q9HD67 2058 aa18.09■□□□□ 0.49
CBWD3-211ENST00000615061 M0QZQ0 153 aa18.09■□□□□ 0.49
CBWD3-211ENST00000615061 CREMQ03060 361 aa18.09■□□□□ 0.49
CBWD3-211ENST00000615061 ZP2Q05996 745 aa18.09■□□□□ 0.49
CBWD3-211ENST00000615061 CBX2Q14781 532 aaPredicted RBP18.09■□□□□ 0.49
CBWD3-211ENST00000615061 C12orf56Q8IXR9 622 aa18.09■□□□□ 0.49
CBWD3-211ENST00000615061 OR5B17Q8NGF7 314 aa18.09■□□□□ 0.49
CBWD3-211ENST00000615061 CCDC47Q96A33 483 aaKnown RBP18.09■□□□□ 0.49
CBWD3-211ENST00000615061 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.09■□□□□ 0.49
CBWD3-211ENST00000615061 ITGB3P05106 788 aa18.08■□□□□ 0.48
CBWD3-211ENST00000615061 SP100P23497 879 aaPredicted RBP18.08■□□□□ 0.48
CBWD3-211ENST00000615061 POLR2BP30876 1174 aaKnown RBP18.08■□□□□ 0.48
CBWD3-211ENST00000615061 SNRPFP62306 86 aaKnown RBP18.08■□□□□ 0.48
CBWD3-211ENST00000615061 MRPL58Q14197 206 aaKnown RBP18.08■□□□□ 0.48
CBWD3-211ENST00000615061 PDXDC1Q6P996 788 aa18.08■□□□□ 0.48
CBWD3-211ENST00000615061 DSTYKQ6XUX3 929 aa18.08■□□□□ 0.48
CBWD3-211ENST00000615061 NT5DC4Q86YG4 428 aa18.08■□□□□ 0.48
CBWD3-211ENST00000615061 KREMEN2Q8NCW0 462 aa18.08■□□□□ 0.48
CBWD3-211ENST00000615061 CXorf38Q8TB03 319 aa18.08■□□□□ 0.48
CBWD3-211ENST00000615061 CCDC34Q96HJ3 373 aa18.08■□□□□ 0.48
CBWD3-211ENST00000615061 SENP8Q96LD8 212 aa18.08■□□□□ 0.48
CBWD3-211ENST00000615061 TIGD1Q96MW7 591 aa18.08■□□□□ 0.48
CBWD3-211ENST00000615061 POP1Q99575 1024 aaKnown RBP18.08■□□□□ 0.48
CBWD3-211ENST00000615061 GZF1Q9H116 711 aaPredicted RBP18.08■□□□□ 0.48
CBWD3-211ENST00000615061 SFXN1Q9H9B4 322 aa18.08■□□□□ 0.48
CBWD3-211ENST00000615061 PCDHB8Q9UN66 801 aa18.08■□□□□ 0.48
CBWD3-211ENST00000615061 PCDHA5Q9Y5H7 936 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms