RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 CCND1P24385 295 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 POLR2BP30876 1174 aaKnown RBP13.28□□□□□ -0.28
MSH6-213ENST00000614496 ARL4CP56559 192 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 FMO1Q01740 532 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 PPP2R5DQ14738 602 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 CYTH2Q99418 400 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 ATP6V0A4Q9HBG4 840 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 USH1CQ9Y6N9 552 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 CCDC160A6NGH7 325 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 H0YCG3 227 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 PIK3R2O00459 728 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 TXNDC9O14530 226 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 CCND2P30279 289 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 MKRN3Q13064 507 aaKnown RBP13.28□□□□□ -0.28
MSH6-213ENST00000614496 SPP2Q13103 211 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 MDH1BQ5I0G3 518 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 ZDHHC24Q6UX98 284 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 ZC3H18Q86VM9 953 aaKnown RBP13.28□□□□□ -0.28
MSH6-213ENST00000614496 TMEM35BQ8NCS4 154 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 MCPH1Q8NEM0 835 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 ZNF526Q8TF50 670 aaPredicted RBP13.28□□□□□ -0.28
MSH6-213ENST00000614496 CENPTQ96BT3 561 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 TLCD1Q96CP7 247 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 OSBPL1AQ9BXW6 950 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 TRIM55Q9BYV6 548 aa13.28□□□□□ -0.28
MSH6-213ENST00000614496 ZNF277Q9NRM2 450 aaPredicted RBP13.28□□□□□ -0.28
MSH6-213ENST00000614496 CCDC195A0A1B0GUA6 201 aa13.27□□□□□ -0.28
MSH6-213ENST00000614496 A8MUI8 341 aa13.27□□□□□ -0.28
MSH6-213ENST00000614496 INO80B-WBP1J3KQ70 363 aa13.27□□□□□ -0.28
MSH6-213ENST00000614496 POLRMTO00411 1230 aaKnown RBP13.27□□□□□ -0.28
MSH6-213ENST00000614496 NOP56O00567 594 aaKnown RBP13.27□□□□□ -0.28
MSH6-213ENST00000614496 PAX7P23759 505 aa13.27□□□□□ -0.28
MSH6-213ENST00000614496 HIF1AQ16665 826 aa13.27□□□□□ -0.28
MSH6-213ENST00000614496 ATP13A4Q4VNC1 1196 aa13.27□□□□□ -0.28
MSH6-213ENST00000614496 PARD3BQ8TEW8 1205 aa13.27□□□□□ -0.28
MSH6-213ENST00000614496 SEMA4DQ92854 862 aa13.27□□□□□ -0.28
MSH6-213ENST00000614496 GRAMD1AQ96CP6 724 aa13.27□□□□□ -0.28
MSH6-213ENST00000614496 KREMEN1Q96MU8 473 aa13.27□□□□□ -0.28
MSH6-213ENST00000614496 INO80BQ9C086 356 aaPredicted RBP13.27□□□□□ -0.28
MSH6-213ENST00000614496 DCLK3Q9C098 648 aa13.27□□□□□ -0.28
MSH6-213ENST00000614496 VCXQ9H320 206 aa13.27□□□□□ -0.28
MSH6-213ENST00000614496 GRHL1Q9NZI5 618 aa13.27□□□□□ -0.28
MSH6-213ENST00000614496 RPTORQ8N122 1335 aa13.27□□□□□ -0.28
MSH6-213ENST00000614496 F5H423 210 aaPredicted RBP13.27□□□□□ -0.29
MSH6-213ENST00000614496 MCF2LO15068 1137 aa13.27□□□□□ -0.29
MSH6-213ENST00000614496 RASSF9O75901 435 aa13.27□□□□□ -0.29
MSH6-213ENST00000614496 SLC27A3Q5K4L6 730 aa13.27□□□□□ -0.29
MSH6-213ENST00000614496 IL31RAQ8NI17 732 aa13.27□□□□□ -0.29
MSH6-213ENST00000614496 GLIS2Q9BZE0 524 aaPredicted RBP13.27□□□□□ -0.29
MSH6-213ENST00000614496 C10orf88Q9H8K7 445 aa13.27□□□□□ -0.29
MSH6-213ENST00000614496 WRAP73Q9P2S5 460 aaPredicted RBP13.27□□□□□ -0.29
MSH6-213ENST00000614496 IP6K2Q9UHH9 426 aa13.27□□□□□ -0.29
MSH6-213ENST00000614496 SLIT2O94813 1529 aa13.27□□□□□ -0.29
MSH6-213ENST00000614496 HAUS5O94927 633 aa13.27□□□□□ -0.29
MSH6-213ENST00000614496 HMGB2P26583 209 aaKnown RBP13.27□□□□□ -0.29
MSH6-213ENST00000614496 DRG2P55039 364 aaKnown RBP13.27□□□□□ -0.29
MSH6-213ENST00000614496 SARNPP82979 210 aaKnown RBP13.27□□□□□ -0.29
MSH6-213ENST00000614496 NFX1Q12986 1120 aaKnown RBP13.27□□□□□ -0.29
MSH6-213ENST00000614496 CLEC16AQ2KHT3 1053 aa13.27□□□□□ -0.29
MSH6-213ENST00000614496 CYP4A22Q5TCH4 519 aa13.27□□□□□ -0.29
MSH6-213ENST00000614496 SYDE1Q6ZW31 735 aaPredicted RBP13.27□□□□□ -0.29
MSH6-213ENST00000614496 ARHGAP24Q8N264 748 aa13.27□□□□□ -0.29
MSH6-213ENST00000614496 TTC25Q96NG3 672 aa13.27□□□□□ -0.29
MSH6-213ENST00000614496 TARS2Q9BW92 718 aaKnown RBP13.27□□□□□ -0.29
MSH6-213ENST00000614496 ZDHHC18Q9NUE0 388 aa13.27□□□□□ -0.29
MSH6-213ENST00000614496 PARVAQ9NVD7 372 aa13.27□□□□□ -0.29
MSH6-213ENST00000614496 ROBO1Q9Y6N7 1651 aa13.26□□□□□ -0.29
MSH6-213ENST00000614496 TNNC2P02585 160 aa13.26□□□□□ -0.29
MSH6-213ENST00000614496 CYP3A4P08684 503 aa13.26□□□□□ -0.29
MSH6-213ENST00000614496 KRT4P19013 534 aa13.26□□□□□ -0.29
MSH6-213ENST00000614496 NR1H3Q13133 447 aa13.26□□□□□ -0.29
MSH6-213ENST00000614496 LGSNQ5TDP6 509 aa13.26□□□□□ -0.29
MSH6-213ENST00000614496 ENOSF1Q7L5Y1 443 aa13.26□□□□□ -0.29
MSH6-213ENST00000614496 KRT27Q7Z3Y8 459 aa13.26□□□□□ -0.29
MSH6-213ENST00000614496 APBB1IPQ7Z5R6 666 aaPredicted RBP13.26□□□□□ -0.29
MSH6-213ENST00000614496 MCOLN2Q8IZK6 566 aa13.26□□□□□ -0.29
MSH6-213ENST00000614496 PPM1NQ8N819 430 aa13.26□□□□□ -0.29
MSH6-213ENST00000614496 ART4Q93070 314 aa13.26□□□□□ -0.29
MSH6-213ENST00000614496 PPARGC1AQ9UBK2 798 aaKnown RBP13.26□□□□□ -0.29
MSH6-213ENST00000614496 ZNF70Q9UC06 446 aaPredicted RBP13.26□□□□□ -0.29
MSH6-213ENST00000614496 TMX2Q9Y320 296 aa13.26□□□□□ -0.29
MSH6-213ENST00000614496 ADAMTSL3P82987 1691 aa13.26□□□□□ -0.29
MSH6-213ENST00000614496 MYBL1P10243 752 aa13.26□□□□□ -0.29
MSH6-213ENST00000614496 ETS1P14921 441 aa13.26□□□□□ -0.29
MSH6-213ENST00000614496 ITGB5P18084 799 aa13.26□□□□□ -0.29
MSH6-213ENST00000614496 HOXA10P31260 410 aaPredicted RBP13.26□□□□□ -0.29
MSH6-213ENST00000614496 PTGIRP43119 386 aa13.26□□□□□ -0.29
MSH6-213ENST00000614496 ARFIP2P53365 341 aa13.26□□□□□ -0.29
MSH6-213ENST00000614496 KCNT1Q5JUK3 1230 aa13.26□□□□□ -0.29
MSH6-213ENST00000614496 SNRNP48Q6IEG0 339 aaKnown RBP13.26□□□□□ -0.29
MSH6-213ENST00000614496 TMEM121Q9BTD3 319 aa13.26□□□□□ -0.29
MSH6-213ENST00000614496 SLC13A1Q9BZW2 595 aa13.26□□□□□ -0.29
MSH6-213ENST00000614496 R3HDM2Q9Y2K5 976 aaKnown RBP13.26□□□□□ -0.29
MSH6-213ENST00000614496 VIL1P09327 827 aaKnown RBP13.26□□□□□ -0.29
MSH6-213ENST00000614496 SFNP31947 248 aa13.26□□□□□ -0.29
MSH6-213ENST00000614496 CPA2P48052 419 aa13.26□□□□□ -0.29
MSH6-213ENST00000614496 IGBP1P78318 339 aa13.26□□□□□ -0.29
MSH6-213ENST00000614496 PCNX4Q63HM2 1172 aa13.26□□□□□ -0.29
MSH6-213ENST00000614496 MIS18BP1Q6P0N0 1132 aa13.26□□□□□ -0.29
MSH6-213ENST00000614496 SENP7Q9BQF6 1050 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms