RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 COLEC11Q9BWP8 271 aa15.84■□□□□ 0.13
CD48-203ENST00000613788 CWH43Q9H720 699 aa15.84■□□□□ 0.13
CD48-203ENST00000613788 AAASQ9NRG9 546 aa15.84■□□□□ 0.13
CD48-203ENST00000613788 DNAJB4Q9UDY4 337 aa15.84■□□□□ 0.13
CD48-203ENST00000613788 FAN1Q9Y2M0 1017 aa15.84■□□□□ 0.13
CD48-203ENST00000613788 ANK1P16157 1881 aa15.83■□□□□ 0.13
CD48-203ENST00000613788 NRP1O14786 923 aa15.83■□□□□ 0.12
CD48-203ENST00000613788 LAG3P18627 525 aa15.83■□□□□ 0.12
CD48-203ENST00000613788 BCAR1P56945 870 aa15.83■□□□□ 0.12
CD48-203ENST00000613788 MYL6P60660 151 aa15.83■□□□□ 0.12
CD48-203ENST00000613788 EPC2Q52LR7 807 aa15.83■□□□□ 0.12
CD48-203ENST00000613788 CHRDL2Q6WN34 429 aa15.83■□□□□ 0.12
CD48-203ENST00000613788 SP7Q8TDD2 431 aaPredicted RBP15.83■□□□□ 0.12
CD48-203ENST00000613788 HPDLQ96IR7 371 aa15.83■□□□□ 0.12
CD48-203ENST00000613788 ERGIC2Q96RQ1 377 aa15.83■□□□□ 0.12
CD48-203ENST00000613788 XPO4Q9C0E2 1151 aaKnown RBP15.83■□□□□ 0.12
CD48-203ENST00000613788 GRPEL1Q9HAV7 217 aa15.83■□□□□ 0.12
CD48-203ENST00000613788 GCNT4Q9P109 453 aa15.83■□□□□ 0.12
CD48-203ENST00000613788 PCDHA11Q9Y5I1 949 aa15.83■□□□□ 0.12
CD48-203ENST00000613788 TEX33O43247 280 aa15.82■□□□□ 0.12
CD48-203ENST00000613788 B3GAT3O94766 335 aa15.82■□□□□ 0.12
CD48-203ENST00000613788 CLSTN1O94985 981 aa15.82■□□□□ 0.12
CD48-203ENST00000613788 STAU1O95793 577 aaKnown RBP15.82■□□□□ 0.12
CD48-203ENST00000613788 GALTP07902 379 aa15.82■□□□□ 0.12
CD48-203ENST00000613788 TAF6P49848 677 aa15.82■□□□□ 0.12
CD48-203ENST00000613788 RABGGTBP53611 331 aa15.82■□□□□ 0.12
CD48-203ENST00000613788 SV2CQ496J9 727 aa15.82■□□□□ 0.12
CD48-203ENST00000613788 SEMA4DQ92854 862 aa15.82■□□□□ 0.12
CD48-203ENST00000613788 ZNF558Q96NG5 402 aa15.82■□□□□ 0.12
CD48-203ENST00000613788 PAAF1Q9BRP4 392 aa15.82■□□□□ 0.12
CD48-203ENST00000613788 CRACR2AQ9BSW2 395 aa15.82■□□□□ 0.12
CD48-203ENST00000613788 VRTNQ9H8Y1 702 aa15.82■□□□□ 0.12
CD48-203ENST00000613788 NUB1Q9Y5A7 615 aa15.82■□□□□ 0.12
CD48-203ENST00000613788 MRPL42Q9Y6G3 142 aaKnown RBP15.82■□□□□ 0.12
CD48-203ENST00000613788 TNRC18O15417 2968 aaPredicted RBP15.82■□□□□ 0.12
CD48-203ENST00000613788 TRIP11Q15643 1979 aa15.81■□□□□ 0.12
CD48-203ENST00000613788 A0A1W2PQC6 194 aa15.81■□□□□ 0.12
CD48-203ENST00000613788 GRXCR1A8MXD5 290 aa15.81■□□□□ 0.12
CD48-203ENST00000613788 TMEM189-UBE2V1I3L0A0 370 aa15.81■□□□□ 0.12
CD48-203ENST00000613788 B4GALT3O60512 393 aa15.81■□□□□ 0.12
CD48-203ENST00000613788 ASS1P00966 412 aaKnown RBP15.81■□□□□ 0.12
CD48-203ENST00000613788 PON1P27169 355 aa15.81■□□□□ 0.12
CD48-203ENST00000613788 SLC11A1P49279 550 aa15.81■□□□□ 0.12
CD48-203ENST00000613788 MRE11P49959 708 aa15.81■□□□□ 0.12
CD48-203ENST00000613788 LILRA4P59901 499 aa15.81■□□□□ 0.12
CD48-203ENST00000613788 KCNMA1Q12791 1236 aa15.81■□□□□ 0.12
CD48-203ENST00000613788 ZNF699Q32M78 642 aa15.81■□□□□ 0.12
CD48-203ENST00000613788 FAM109BQ6ICB4 259 aaPredicted RBP15.81■□□□□ 0.12
CD48-203ENST00000613788 KCNT2Q6UVM3 1135 aa15.81■□□□□ 0.12
CD48-203ENST00000613788 TMEM130Q8N3G9 435 aa15.81■□□□□ 0.12
CD48-203ENST00000613788 LMO3Q8TAP4 145 aa15.81■□□□□ 0.12
CD48-203ENST00000613788 PCMTD1Q96MG8 357 aaPredicted RBP15.81■□□□□ 0.12
CD48-203ENST00000613788 INTS2Q9H0H0 1204 aaKnown RBP15.81■□□□□ 0.12
CD48-203ENST00000613788 XYLT2Q9H1B5 865 aa15.81■□□□□ 0.12
CD48-203ENST00000613788 PRO3102Q9H379 93 aa15.81■□□□□ 0.12
CD48-203ENST00000613788 CACNG4Q9UBN1 327 aa15.81■□□□□ 0.12
CD48-203ENST00000613788 RWDD3Q9Y3V2 267 aa15.81■□□□□ 0.12
CD48-203ENST00000613788 PCDHB12Q9Y5F1 795 aa15.81■□□□□ 0.12
CD48-203ENST00000613788 FNDC1Q4ZHG4 1894 aaPredicted RBP15.81■□□□□ 0.12
CD48-203ENST00000613788 KPNA7A9QM74 516 aa15.8■□□□□ 0.12
CD48-203ENST00000613788 PPEF2O14830 753 aa15.8■□□□□ 0.12
CD48-203ENST00000613788 AP5Z1O43299 807 aa15.8■□□□□ 0.12
CD48-203ENST00000613788 TRAPPC3O43617 180 aa15.8■□□□□ 0.12
CD48-203ENST00000613788 TADA2AO75478 443 aa15.8■□□□□ 0.12
CD48-203ENST00000613788 P4HA1P13674 534 aa15.8■□□□□ 0.12
CD48-203ENST00000613788 SLC9A1P19634 815 aa15.8■□□□□ 0.12
CD48-203ENST00000613788 SYCP1Q15431 976 aa15.8■□□□□ 0.12
CD48-203ENST00000613788 RAB30Q15771 203 aa15.8■□□□□ 0.12
CD48-203ENST00000613788 WDR72Q3MJ13 1102 aa15.8■□□□□ 0.12
CD48-203ENST00000613788 ZNF667Q5HYK9 610 aa15.8■□□□□ 0.12
CD48-203ENST00000613788 TRIM65Q6PJ69 517 aa15.8■□□□□ 0.12
CD48-203ENST00000613788 RABGGTAQ92696 567 aa15.8■□□□□ 0.12
CD48-203ENST00000613788 CLP1Q92989 425 aaKnown RBP15.8■□□□□ 0.12
CD48-203ENST00000613788 FAXDC2Q96IV6 333 aa15.8■□□□□ 0.12
CD48-203ENST00000613788 NT5C1BQ96P26 610 aa15.8■□□□□ 0.12
CD48-203ENST00000613788 PI4K2AQ9BTU6 479 aa15.8■□□□□ 0.12
CD48-203ENST00000613788 HCSTQ9UBK5 93 aa15.8■□□□□ 0.12
CD48-203ENST00000613788 MSRAQ9UJ68 235 aa15.8■□□□□ 0.12
CD48-203ENST00000613788 PRG3Q9Y2Y8 225 aaPredicted RBP15.8■□□□□ 0.12
CD48-203ENST00000613788 TDRD15B5MCY1 1934 aaKnown RBP15.8■□□□□ 0.12
CD48-203ENST00000613788 PDCD11Q14690 1871 aaKnown RBP15.79■□□□□ 0.12
CD48-203ENST00000613788 ARHGEF37A1IGU5 675 aa15.79■□□□□ 0.12
CD48-203ENST00000613788 PPM1AP35813 382 aa15.79■□□□□ 0.12
CD48-203ENST00000613788 NOP14P78316 857 aaKnown RBP15.79■□□□□ 0.12
CD48-203ENST00000613788 SCARA3Q6AZY7 606 aa15.79■□□□□ 0.12
CD48-203ENST00000613788 COLGALT1Q8NBJ5 622 aa15.79■□□□□ 0.12
CD48-203ENST00000613788 FAM81BQ96LP2 452 aa15.79■□□□□ 0.12
CD48-203ENST00000613788 PLCB1Q9NQ66 1216 aa15.79■□□□□ 0.12
CD48-203ENST00000613788 SPG21Q9NZD8 308 aa15.79■□□□□ 0.12
CD48-203ENST00000613788 ADAM28Q9UKQ2 775 aa15.79■□□□□ 0.12
CD48-203ENST00000613788 COL4A6Q14031 1691 aa15.79■□□□□ 0.12
CD48-203ENST00000613788 PTPRSQ13332 1948 aa15.79■□□□□ 0.12
CD48-203ENST00000613788 A0A1W2PPC1 479 aa15.78■□□□□ 0.12
CD48-203ENST00000613788 LCHNA4D1U4 455 aa15.78■□□□□ 0.12
CD48-203ENST00000613788 LINC01553A4QN01 128 aa15.78■□□□□ 0.12
CD48-203ENST00000613788 NT5C1B-RDH14C9J2C7 533 aa15.78■□□□□ 0.12
CD48-203ENST00000613788 KIF4AO95239 1232 aa15.78■□□□□ 0.12
CD48-203ENST00000613788 ZNF75DP51815 510 aa15.78■□□□□ 0.12
CD48-203ENST00000613788 TNNC1P63316 161 aa15.78■□□□□ 0.12
CD48-203ENST00000613788 ELAVL2Q12926 359 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms