RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 EXOC3L4Q17RC7 722 aa23.34■■□□□ 1.33
POLR2J3-220ENST00000613744 SPDYAQ5MJ70 313 aa23.34■■□□□ 1.33
POLR2J3-220ENST00000613744 DCAF12L1Q5VU92 463 aa23.34■■□□□ 1.33
POLR2J3-220ENST00000613744 WDR11Q9BZH6 1224 aa23.34■■□□□ 1.33
POLR2J3-220ENST00000613744 PEX11AO75192 247 aa23.34■■□□□ 1.33
POLR2J3-220ENST00000613744 CYP3A4P08684 503 aa23.34■■□□□ 1.33
POLR2J3-220ENST00000613744 HSPA1AP0DMV8 641 aaKnown RBP23.34■■□□□ 1.33
POLR2J3-220ENST00000613744 HSPA1BP0DMV9 641 aaKnown RBP23.34■■□□□ 1.33
POLR2J3-220ENST00000613744 ITGB5P18084 799 aa23.34■■□□□ 1.33
POLR2J3-220ENST00000613744 PON1P27169 355 aa23.34■■□□□ 1.33
POLR2J3-220ENST00000613744 PEX5P50542 639 aa23.34■■□□□ 1.33
POLR2J3-220ENST00000613744 GALCP54803 685 aa23.34■■□□□ 1.33
POLR2J3-220ENST00000613744 ARMCX2Q7L311 632 aa23.34■■□□□ 1.33
POLR2J3-220ENST00000613744 BICD1Q96G01 975 aa23.34■■□□□ 1.33
POLR2J3-220ENST00000613744 MAGEB18Q96M61 343 aa23.34■■□□□ 1.33
POLR2J3-220ENST00000613744 TRAPPC9Q96Q05 1148 aa23.34■■□□□ 1.33
POLR2J3-220ENST00000613744 ETNK1Q9HBU6 452 aa23.34■■□□□ 1.33
POLR2J3-220ENST00000613744 CYP3A7-CYP3A51PA0A087WV96 503 aa23.33■■□□□ 1.33
POLR2J3-220ENST00000613744 TMEM120BA0PK00 339 aa23.33■■□□□ 1.33
POLR2J3-220ENST00000613744 TPBGLP0DKB5 382 aa23.33■■□□□ 1.33
POLR2J3-220ENST00000613744 CYP3A7P24462 503 aa23.33■■□□□ 1.33
POLR2J3-220ENST00000613744 MTFR1Q15390 333 aa23.33■■□□□ 1.33
POLR2J3-220ENST00000613744 STXBP2Q15833 593 aa23.33■■□□□ 1.33
POLR2J3-220ENST00000613744 ZNF568Q3ZCX4 644 aa23.33■■□□□ 1.33
POLR2J3-220ENST00000613744 HYIQ5T013 277 aa23.33■■□□□ 1.33
POLR2J3-220ENST00000613744 SLC30A5Q8TAD4 765 aa23.33■■□□□ 1.33
POLR2J3-220ENST00000613744 IWS1Q96ST2 819 aa23.33■■□□□ 1.33
POLR2J3-220ENST00000613744 PKD2L1Q9P0L9 805 aa23.33■■□□□ 1.33
POLR2J3-220ENST00000613744 CASP8AP2Q9UKL3 1982 aa23.33■■□□□ 1.33
POLR2J3-220ENST00000613744 KDM3AQ9Y4C1 1321 aa23.33■■□□□ 1.32
POLR2J3-220ENST00000613744 MIF4GDA9UHW6 222 aaKnown RBP23.32■■□□□ 1.32
POLR2J3-220ENST00000613744 HADHBP55084 474 aaKnown RBP23.32■■□□□ 1.32
POLR2J3-220ENST00000613744 IRGCQ6NXR0 463 aa23.32■■□□□ 1.32
POLR2J3-220ENST00000613744 VSTM1Q6UX27 236 aa23.32■■□□□ 1.32
POLR2J3-220ENST00000613744 SEPT14Q6ZU15 432 aa23.32■■□□□ 1.32
POLR2J3-220ENST00000613744 FBXO16Q8IX29 292 aaPredicted RBP23.32■■□□□ 1.32
POLR2J3-220ENST00000613744 ASAP3Q8TDY4 903 aa23.32■■□□□ 1.32
POLR2J3-220ENST00000613744 GLG1Q92896 1179 aa23.32■■□□□ 1.32
POLR2J3-220ENST00000613744 ARHGEF2Q92974 986 aaKnown RBP23.32■■□□□ 1.32
POLR2J3-220ENST00000613744 ART4Q93070 314 aa23.32■■□□□ 1.32
POLR2J3-220ENST00000613744 APBA2Q99767 749 aa23.32■■□□□ 1.32
POLR2J3-220ENST00000613744 CCDC113Q9H0I3 377 aa23.32■■□□□ 1.32
POLR2J3-220ENST00000613744 WDR35Q9P2L0 1181 aa23.32■■□□□ 1.32
POLR2J3-220ENST00000613744 TRIM17Q9Y577 477 aa23.32■■□□□ 1.32
POLR2J3-220ENST00000613744 GTPBP10A4D1E9 387 aaKnown RBP23.32■■□□□ 1.32
POLR2J3-220ENST00000613744 RGS20O76081 388 aa23.32■■□□□ 1.32
POLR2J3-220ENST00000613744 GSTA2P09210 222 aa23.32■■□□□ 1.32
POLR2J3-220ENST00000613744 CIITAP33076 1130 aa23.32■■□□□ 1.32
POLR2J3-220ENST00000613744 RAD23BP54727 409 aa23.32■■□□□ 1.32
POLR2J3-220ENST00000613744 CEP55Q53EZ4 464 aa23.32■■□□□ 1.32
POLR2J3-220ENST00000613744 MOXD1Q6UVY6 613 aa23.32■■□□□ 1.32
POLR2J3-220ENST00000613744 U2AF1L4Q8WU68 220 aaKnown RBP23.32■■□□□ 1.32
POLR2J3-220ENST00000613744 HAS1Q92839 578 aa23.32■■□□□ 1.32
POLR2J3-220ENST00000613744 UTP4Q969X6 686 aaKnown RBP23.32■■□□□ 1.32
POLR2J3-220ENST00000613744 LENG9Q96B70 501 aa23.32■■□□□ 1.32
POLR2J3-220ENST00000613744 NT5C3AQ9H0P0 336 aa23.32■■□□□ 1.32
POLR2J3-220ENST00000613744 ERVK-5Q9HDB9 667 aa23.32■■□□□ 1.32
POLR2J3-220ENST00000613744 SDAD1Q9NVU7 687 aaKnown RBP eCLIP23.32■■□□□ 1.32
POLR2J3-220ENST00000613744 RGL1Q9NZL6 768 aa23.32■■□□□ 1.32
POLR2J3-220ENST00000613744 CTTNBP2NLQ9P2B4 639 aa23.32■■□□□ 1.32
POLR2J3-220ENST00000613744 SRRDQ9UH36 339 aa23.32■■□□□ 1.32
POLR2J3-220ENST00000613744 ARMCX3Q9UH62 379 aaPredicted RBP23.32■■□□□ 1.32
POLR2J3-220ENST00000613744 GGT7Q9UJ14 662 aa23.32■■□□□ 1.32
POLR2J3-220ENST00000613744 PCDHA3Q9Y5H8 950 aa23.32■■□□□ 1.32
POLR2J3-220ENST00000613744 ZNF236Q9UL36 1845 aa23.31■■□□□ 1.32
POLR2J3-220ENST00000613744 MROH7Q68CQ1 1323 aa23.31■■□□□ 1.32
POLR2J3-220ENST00000613744 ARP10275 920 aa23.31■■□□□ 1.32
POLR2J3-220ENST00000613744 ACTN1P12814 892 aa23.31■■□□□ 1.32
POLR2J3-220ENST00000613744 SLC9A1P19634 815 aa23.31■■□□□ 1.32
POLR2J3-220ENST00000613744 EDNRBP24530 442 aa23.31■■□□□ 1.32
POLR2J3-220ENST00000613744 CTNNA2P26232 953 aa23.31■■□□□ 1.32
POLR2J3-220ENST00000613744 RPL21P46778 160 aaKnown RBP23.31■■□□□ 1.32
POLR2J3-220ENST00000613744 SF3A3Q12874 501 aaKnown RBP eCLIP23.31■■□□□ 1.32
POLR2J3-220ENST00000613744 SETDB1Q15047 1291 aa23.31■■□□□ 1.32
POLR2J3-220ENST00000613744 PTPROQ16827 1216 aa23.31■■□□□ 1.32
POLR2J3-220ENST00000613744 Q4G0T1 1027 aa23.31■■□□□ 1.32
POLR2J3-220ENST00000613744 PRAMEF19Q5SWL8 479 aa23.31■■□□□ 1.32
POLR2J3-220ENST00000613744 SLC35G2Q8TBE7 412 aa23.31■■□□□ 1.32
POLR2J3-220ENST00000613744 KCNV2Q8TDN2 545 aa23.31■■□□□ 1.32
POLR2J3-220ENST00000613744 DTNBP1Q96EV8 351 aa23.31■■□□□ 1.32
POLR2J3-220ENST00000613744 MXRA8Q9BRK3 442 aa23.31■■□□□ 1.32
POLR2J3-220ENST00000613744 TINF2Q9BSI4 451 aa23.31■■□□□ 1.32
POLR2J3-220ENST00000613744 IGLV3-22A0A075B6J6 115 aa23.31■■□□□ 1.32
POLR2J3-220ENST00000613744 ASB14A6NK59 587 aa23.31■■□□□ 1.32
POLR2J3-220ENST00000613744 TCEA3O75764 348 aa23.31■■□□□ 1.32
POLR2J3-220ENST00000613744 HOXC6P09630 235 aa23.31■■□□□ 1.32
POLR2J3-220ENST00000613744 LBX1P52954 281 aa23.31■■□□□ 1.32
POLR2J3-220ENST00000613744 GNPTABQ3T906 1256 aa23.31■■□□□ 1.32
POLR2J3-220ENST00000613744 ARHGEF18Q6ZSZ5 1173 aa23.31■■□□□ 1.32
POLR2J3-220ENST00000613744 SCFD1Q8WVM8 642 aa23.31■■□□□ 1.32
POLR2J3-220ENST00000613744 CTNNBL1Q8WYA6 563 aaPredicted RBP23.31■■□□□ 1.32
POLR2J3-220ENST00000613744 MBOAT7Q96N66 472 aa23.31■■□□□ 1.32
POLR2J3-220ENST00000613744 METTL14Q9HCE5 456 aaKnown RBP23.31■■□□□ 1.32
POLR2J3-220ENST00000613744 NKX1-2Q9UD57 310 aaPredicted RBP23.31■■□□□ 1.32
POLR2J3-220ENST00000613744 DBR1Q9UK59 544 aaKnown RBP23.31■■□□□ 1.32
POLR2J3-220ENST00000613744 TRAF3IP3Q9Y228 551 aa23.31■■□□□ 1.32
POLR2J3-220ENST00000613744 SORBS3O60504 671 aa23.3■■□□□ 1.32
POLR2J3-220ENST00000613744 SNAI1O95863 264 aaPredicted RBP23.3■■□□□ 1.32
POLR2J3-220ENST00000613744 HSPA8P11142 646 aaKnown RBP23.3■■□□□ 1.32
POLR2J3-220ENST00000613744 ELNP15502 786 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms