RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 NAGPAQ9UK23 515 aa21.23■□□□□ 0.99
CTDP1-208ENST00000613122 TDRD10Q5VZ19 366 aaKnown RBP21.22■□□□□ 0.99
CTDP1-208ENST00000613122 SCFD1Q8WVM8 642 aa21.22■□□□□ 0.99
CTDP1-208ENST00000613122 HPDLQ96IR7 371 aa21.22■□□□□ 0.99
CTDP1-208ENST00000613122 ASPSCR1Q9BZE9 553 aa21.22■□□□□ 0.99
CTDP1-208ENST00000613122 TAF1DQ9H5J8 278 aaPredicted RBP21.22■□□□□ 0.99
CTDP1-208ENST00000613122 POLLQ9UGP5 575 aa21.22■□□□□ 0.99
CTDP1-208ENST00000613122 C2CD2LO14523 706 aa21.22■□□□□ 0.99
CTDP1-208ENST00000613122 TLR2O60603 784 aa21.22■□□□□ 0.99
CTDP1-208ENST00000613122 PDAP1Q13442 181 aaKnown RBP21.22■□□□□ 0.99
CTDP1-208ENST00000613122 P3H1Q32P28 736 aa21.22■□□□□ 0.99
CTDP1-208ENST00000613122 C10orf120Q5SQS8 335 aa21.22■□□□□ 0.99
CTDP1-208ENST00000613122 MAP2K2P36507 400 aa21.22■□□□□ 0.99
CTDP1-208ENST00000613122 NCAPHQ15003 741 aa21.22■□□□□ 0.99
CTDP1-208ENST00000613122 ACBD5Q5T8D3 534 aaPredicted RBP21.22■□□□□ 0.99
CTDP1-208ENST00000613122 NRBF2Q96F24 287 aa21.22■□□□□ 0.99
CTDP1-208ENST00000613122 NIF3L1Q9GZT8 377 aa21.22■□□□□ 0.99
CTDP1-208ENST00000613122 GFAPP14136 432 aa21.22■□□□□ 0.99
CTDP1-208ENST00000613122 KLRK1P26718 216 aa21.22■□□□□ 0.99
CTDP1-208ENST00000613122 GRAMD1BQ3KR37 738 aa21.22■□□□□ 0.99
CTDP1-208ENST00000613122 TEKT2Q9UIF3 430 aa21.22■□□□□ 0.99
CTDP1-208ENST00000613122 BACE1P56817 501 aa21.22■□□□□ 0.99
CTDP1-208ENST00000613122 EFHC1Q5JVL4 640 aa21.22■□□□□ 0.99
CTDP1-208ENST00000613122 ARRDC4Q8NCT1 418 aa21.22■□□□□ 0.99
CTDP1-208ENST00000613122 PIP4K2CQ8TBX8 421 aa21.22■□□□□ 0.99
CTDP1-208ENST00000613122 CLMNQ96JQ2 1002 aa21.22■□□□□ 0.99
CTDP1-208ENST00000613122 ANLNQ9NQW6 1124 aa21.22■□□□□ 0.99
CTDP1-208ENST00000613122 ZFP69BQ9UJL9 534 aa21.22■□□□□ 0.99
CTDP1-208ENST00000613122 UBQLN1Q9UMX0 589 aaKnown RBP21.22■□□□□ 0.99
CTDP1-208ENST00000613122 GYG2O15488 501 aa21.21■□□□□ 0.99
CTDP1-208ENST00000613122 FXR2P51116 673 aaKnown RBP eCLIP21.21■□□□□ 0.99
CTDP1-208ENST00000613122 MAPRE1Q15691 268 aaKnown RBP21.21■□□□□ 0.99
CTDP1-208ENST00000613122 SLC35G2Q8TBE7 412 aa21.21■□□□□ 0.99
CTDP1-208ENST00000613122 PPP1R2P1Q96PQ5 205 aa21.21■□□□□ 0.99
CTDP1-208ENST00000613122 MAD2L2Q9UI95 211 aa21.21■□□□□ 0.99
CTDP1-208ENST00000613122 UCHL3P15374 230 aa21.21■□□□□ 0.99
CTDP1-208ENST00000613122 NPEPPSP55786 919 aa21.21■□□□□ 0.99
CTDP1-208ENST00000613122 MAGOHP61326 146 aaKnown RBP21.21■□□□□ 0.99
CTDP1-208ENST00000613122 MTBPQ96DY7 904 aa21.21■□□□□ 0.99
CTDP1-208ENST00000613122 POLR3CQ9BUI4 534 aaPredicted RBP21.21■□□□□ 0.99
CTDP1-208ENST00000613122 UNC45AQ9H3U1 944 aa21.21■□□□□ 0.99
CTDP1-208ENST00000613122 GRAP2O75791 330 aa21.21■□□□□ 0.99
CTDP1-208ENST00000613122 CHGBP05060 677 aa21.21■□□□□ 0.99
CTDP1-208ENST00000613122 FAM200BP0CF97 657 aa21.21■□□□□ 0.99
CTDP1-208ENST00000613122 BRAFP15056 766 aa21.21■□□□□ 0.99
CTDP1-208ENST00000613122 ANTXR2P58335 489 aa21.21■□□□□ 0.99
CTDP1-208ENST00000613122 ZNF484Q5JVG2 852 aa21.21■□□□□ 0.99
CTDP1-208ENST00000613122 SENP1Q9P0U3 644 aa21.21■□□□□ 0.99
CTDP1-208ENST00000613122 HDAC6Q9UBN7 1215 aa21.21■□□□□ 0.99
CTDP1-208ENST00000613122 E9PCH4 1651 aa21.21■□□□□ 0.99
CTDP1-208ENST00000613122 SYDE1Q6ZW31 735 aaPredicted RBP21.21■□□□□ 0.99
CTDP1-208ENST00000613122 ADCK2Q7Z695 626 aa21.21■□□□□ 0.99
CTDP1-208ENST00000613122 CHSY1Q86X52 802 aa21.21■□□□□ 0.99
CTDP1-208ENST00000613122 ZDHHC15Q96MV8 337 aa21.21■□□□□ 0.99
CTDP1-208ENST00000613122 XAB2Q9HCS7 855 aaKnown RBP21.21■□□□□ 0.99
CTDP1-208ENST00000613122 PPP2R3BQ9Y5P8 575 aa21.21■□□□□ 0.99
CTDP1-208ENST00000613122 ARHGAP10A1A4S6 786 aa21.21■□□□□ 0.99
CTDP1-208ENST00000613122 H7C4K7 107 aa21.21■□□□□ 0.99
CTDP1-208ENST00000613122 SERPIND1P05546 499 aa21.21■□□□□ 0.99
CTDP1-208ENST00000613122 WEE2P0C1S8 567 aa21.21■□□□□ 0.99
CTDP1-208ENST00000613122 FBXO28Q9NVF7 368 aa21.21■□□□□ 0.99
CTDP1-208ENST00000613122 ESYT3A0FGR9 886 aa21.2■□□□□ 0.98
CTDP1-208ENST00000613122 SPAG7O75391 227 aa21.2■□□□□ 0.98
CTDP1-208ENST00000613122 NDUFS3O75489 264 aa21.2■□□□□ 0.98
CTDP1-208ENST00000613122 CCDC15Q0P6D6 951 aa21.2■□□□□ 0.98
CTDP1-208ENST00000613122 BFSP2Q13515 415 aa21.2■□□□□ 0.98
CTDP1-208ENST00000613122 SLC18A3Q16572 532 aa21.2■□□□□ 0.98
CTDP1-208ENST00000613122 DCAF6Q58WW2 860 aa21.2■□□□□ 0.98
CTDP1-208ENST00000613122 TARS2Q9BW92 718 aaKnown RBP21.2■□□□□ 0.98
CTDP1-208ENST00000613122 YIPF2Q9BWQ6 316 aa21.2■□□□□ 0.98
CTDP1-208ENST00000613122 TMEM117Q9H0C3 514 aa21.2■□□□□ 0.98
CTDP1-208ENST00000613122 PYGLP06737 847 aa21.2■□□□□ 0.98
CTDP1-208ENST00000613122 ABI2Q9NYB9 513 aaPredicted RBP21.2■□□□□ 0.98
CTDP1-208ENST00000613122 RALBP11234 206 aa21.2■□□□□ 0.98
CTDP1-208ENST00000613122 TWF1Q12792 350 aa21.2■□□□□ 0.98
CTDP1-208ENST00000613122 KRT35Q92764 455 aa21.2■□□□□ 0.98
CTDP1-208ENST00000613122 AARSP49588 968 aaKnown RBP eCLIP21.2■□□□□ 0.98
CTDP1-208ENST00000613122 PCSK9Q8NBP7 692 aaKnown RBP21.2■□□□□ 0.98
CTDP1-208ENST00000613122 UBA3Q8TBC4 463 aa21.2■□□□□ 0.98
CTDP1-208ENST00000613122 LRRC37BQ96QE4 947 aa21.2■□□□□ 0.98
CTDP1-208ENST00000613122 PCDHB2Q9Y5E7 798 aa21.2■□□□□ 0.98
CTDP1-208ENST00000613122 PITPNM2Q9BZ72 1349 aa21.2■□□□□ 0.98
CTDP1-208ENST00000613122 WASHC5Q12768 1159 aa21.19■□□□□ 0.98
CTDP1-208ENST00000613122 ANKMY2Q8IV38 441 aa21.19■□□□□ 0.98
CTDP1-208ENST00000613122 UBE2Q2Q8WVN8 375 aa21.19■□□□□ 0.98
CTDP1-208ENST00000613122 CYTH2Q99418 400 aa21.19■□□□□ 0.98
CTDP1-208ENST00000613122 C17orf75Q9HAS0 396 aa21.19■□□□□ 0.98
CTDP1-208ENST00000613122 HOXA2O43364 376 aa21.19■□□□□ 0.98
CTDP1-208ENST00000613122 SRGNP10124 158 aa21.19■□□□□ 0.98
CTDP1-208ENST00000613122 HMOX2P30519 316 aa21.19■□□□□ 0.98
CTDP1-208ENST00000613122 GSPT2Q8IYD1 628 aaKnown RBP21.19■□□□□ 0.98
CTDP1-208ENST00000613122 ACER1Q8TDN7 264 aa21.19■□□□□ 0.98
CTDP1-208ENST00000613122 TSPAN17Q96FV3 270 aa21.19■□□□□ 0.98
CTDP1-208ENST00000613122 ITGB3P05106 788 aa21.19■□□□□ 0.98
CTDP1-208ENST00000613122 STK4Q13043 487 aa21.19■□□□□ 0.98
CTDP1-208ENST00000613122 TEDDM1Q5T9Z0 273 aa21.19■□□□□ 0.98
CTDP1-208ENST00000613122 ARHGEF26Q96DR7 871 aa21.19■□□□□ 0.98
CTDP1-208ENST00000613122 ARHGEF38Q9NXL2 777 aa21.19■□□□□ 0.98
CTDP1-208ENST00000613122 APRTP07741 180 aa21.19■□□□□ 0.98
CTDP1-208ENST00000613122 GPD1P21695 349 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms