RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 FAM3CQ92520 227 aa25.69■■□□□ 1.7
MMP28-203ENST00000612672 SMARCD2Q92925 531 aa25.69■■□□□ 1.7
MMP28-203ENST00000612672 SECISBP2LQ93073 1101 aaKnown RBP25.69■■□□□ 1.7
MMP28-203ENST00000612672 IFT74Q96LB3 600 aa25.69■■□□□ 1.7
MMP28-203ENST00000612672 RTKNQ9BST9 563 aa25.69■■□□□ 1.7
MMP28-203ENST00000612672 C2orf42Q9NWW7 574 aa25.69■■□□□ 1.7
MMP28-203ENST00000612672 GMEB2Q9UKD1 530 aa25.69■■□□□ 1.7
MMP28-203ENST00000612672 PHLPP2Q6ZVD8 1323 aa25.68■■□□□ 1.7
MMP28-203ENST00000612672 MAN2B1O00754 1011 aa25.68■■□□□ 1.7
MMP28-203ENST00000612672 SYN3O14994 580 aa25.68■■□□□ 1.7
MMP28-203ENST00000612672 MICAL2O94851 1124 aa25.68■■□□□ 1.7
MMP28-203ENST00000612672 CHRNB1P11230 501 aa25.68■■□□□ 1.7
MMP28-203ENST00000612672 PSMC3P17980 439 aa25.68■■□□□ 1.7
MMP28-203ENST00000612672 NPTX2P47972 431 aa25.68■■□□□ 1.7
MMP28-203ENST00000612672 TWF1Q12792 350 aa25.68■■□□□ 1.7
MMP28-203ENST00000612672 MAMSTRQ6ZN01 415 aa25.68■■□□□ 1.7
MMP28-203ENST00000612672 KIFAP3Q92845 792 aa25.68■■□□□ 1.7
MMP28-203ENST00000612672 TARS2Q9BW92 718 aaKnown RBP25.68■■□□□ 1.7
MMP28-203ENST00000612672 CNOT1A5YKK6 2376 aaKnown RBP25.68■■□□□ 1.7
MMP28-203ENST00000612672 ANK1P16157 1881 aa25.68■■□□□ 1.7
MMP28-203ENST00000612672 NUP210Q8TEM1 1887 aaPredicted RBP25.68■■□□□ 1.7
MMP28-203ENST00000612672 K7ERI5 159 aa25.67■■□□□ 1.7
MMP28-203ENST00000612672 KCNE1P15382 129 aa25.67■■□□□ 1.7
MMP28-203ENST00000612672 SDHBP21912 280 aa25.67■■□□□ 1.7
MMP28-203ENST00000612672 PROZP22891 400 aa25.67■■□□□ 1.7
MMP28-203ENST00000612672 EPHA5P54756 1037 aa25.67■■□□□ 1.7
MMP28-203ENST00000612672 NBR1Q14596 966 aa25.67■■□□□ 1.7
MMP28-203ENST00000612672 ANKRD1Q15327 319 aa25.67■■□□□ 1.7
MMP28-203ENST00000612672 TEAD2Q15562 447 aa25.67■■□□□ 1.7
MMP28-203ENST00000612672 CTXN3Q4LDR2 81 aa25.67■■□□□ 1.7
MMP28-203ENST00000612672 RNF19BQ6ZMZ0 732 aa25.67■■□□□ 1.7
MMP28-203ENST00000612672 C4orf32Q8N8J7 132 aa25.67■■□□□ 1.7
MMP28-203ENST00000612672 IRF7Q92985 503 aa25.67■■□□□ 1.7
MMP28-203ENST00000612672 ZBTB45Q96K62 511 aaPredicted RBP25.67■■□□□ 1.7
MMP28-203ENST00000612672 CCDC94Q9BW85 323 aaPredicted RBP25.67■■□□□ 1.7
MMP28-203ENST00000612672 TRPV5Q9NQA5 729 aa25.67■■□□□ 1.7
MMP28-203ENST00000612672 RBM12Q9NTZ6 932 aaKnown RBP25.67■■□□□ 1.7
MMP28-203ENST00000612672 CNTN3Q9P232 1028 aa25.67■■□□□ 1.7
MMP28-203ENST00000612672 MYH11P35749 1972 aa25.66■■□□□ 1.7
MMP28-203ENST00000612672 TSC2P49815 1807 aa25.66■■□□□ 1.7
MMP28-203ENST00000612672 MYL4P12829 197 aa25.66■■□□□ 1.7
MMP28-203ENST00000612672 CCNE1P24864 410 aa25.66■■□□□ 1.7
MMP28-203ENST00000612672 CCT6AP40227 531 aaKnown RBP25.66■■□□□ 1.7
MMP28-203ENST00000612672 SOX9P48436 509 aa25.66■■□□□ 1.7
MMP28-203ENST00000612672 YARSP54577 528 aaKnown RBP25.66■■□□□ 1.7
MMP28-203ENST00000612672 PEX3P56589 373 aa25.66■■□□□ 1.7
MMP28-203ENST00000612672 MAPK7Q13164 816 aa25.66■■□□□ 1.7
MMP28-203ENST00000612672 SEZ6Q53EL9 994 aa25.66■■□□□ 1.7
MMP28-203ENST00000612672 ERMNQ8TAM6 284 aa25.66■■□□□ 1.7
MMP28-203ENST00000612672 SHKBP1Q8TBC3 707 aa25.66■■□□□ 1.7
MMP28-203ENST00000612672 ZSCAN18Q8TBC5 510 aaPredicted RBP25.66■■□□□ 1.7
MMP28-203ENST00000612672 SUSD3Q96L08 255 aa25.66■■□□□ 1.7
MMP28-203ENST00000612672 LRRC3Q9BY71 257 aa25.66■■□□□ 1.7
MMP28-203ENST00000612672 CRISPLD1Q9H336 500 aa25.66■■□□□ 1.7
MMP28-203ENST00000612672 ARHGAP28Q9P2N2 729 aa25.66■■□□□ 1.7
MMP28-203ENST00000612672 TUBGCP4Q9UGJ1 667 aa25.66■■□□□ 1.7
MMP28-203ENST00000612672 ZNF197O14709 1029 aa25.65■■□□□ 1.7
MMP28-203ENST00000612672 HRO43593 1189 aa25.65■■□□□ 1.7
MMP28-203ENST00000612672 ADRB1P08588 477 aa25.65■■□□□ 1.7
MMP28-203ENST00000612672 TRIM29Q14134 588 aa25.65■■□□□ 1.7
MMP28-203ENST00000612672 STXBP5Q5T5C0 1151 aa25.65■■□□□ 1.7
MMP28-203ENST00000612672 TPGS2Q68CL5 300 aa25.65■■□□□ 1.7
MMP28-203ENST00000612672 LAIR1Q6GTX8 287 aa25.65■■□□□ 1.7
MMP28-203ENST00000612672 PRR23BQ6ZRT6 265 aa25.65■■□□□ 1.7
MMP28-203ENST00000612672 Q6ZS52 159 aa25.65■■□□□ 1.7
MMP28-203ENST00000612672 DDX12PQ92771 950 aa25.65■■□□□ 1.7
MMP28-203ENST00000612672 TRPV4Q9HBA0 871 aa25.65■■□□□ 1.7
MMP28-203ENST00000612672 TOPORSQ9NS56 1045 aaPredicted RBP25.65■■□□□ 1.7
MMP28-203ENST00000612672 DDX19AQ9NUU7 478 aaKnown RBP25.65■■□□□ 1.7
MMP28-203ENST00000612672 AFF4Q9UHB7 1163 aaKnown RBP25.65■■□□□ 1.7
MMP28-203ENST00000612672 KIAA1024Q9UPX6 916 aa25.65■■□□□ 1.7
MMP28-203ENST00000612672 CCDC169A6NNP5 214 aa25.64■■□□□ 1.7
MMP28-203ENST00000612672 HEPACAM2A8MVW5 462 aa25.64■■□□□ 1.7
MMP28-203ENST00000612672 CHURC1-FNTBB4DL54 471 aa25.64■■□□□ 1.7
MMP28-203ENST00000612672 H7C4K7 107 aa25.64■■□□□ 1.7
MMP28-203ENST00000612672 GDF9O60383 454 aa25.64■■□□□ 1.7
MMP28-203ENST00000612672 OR4Q2P0C623 313 aa25.64■■□□□ 1.7
MMP28-203ENST00000612672 HARSP12081 509 aaKnown RBP25.64■■□□□ 1.7
MMP28-203ENST00000612672 FNTBP49356 437 aa25.64■■□□□ 1.7
MMP28-203ENST00000612672 CCR3P51677 355 aa25.64■■□□□ 1.7
MMP28-203ENST00000612672 ANAPC15P60006 121 aa25.64■■□□□ 1.7
MMP28-203ENST00000612672 TMC8Q8IU68 726 aa25.64■■□□□ 1.7
MMP28-203ENST00000612672 GPIHBP1Q8IV16 184 aa25.64■■□□□ 1.7
MMP28-203ENST00000612672 TBC1D32Q96NH3 1257 aa25.64■■□□□ 1.7
MMP28-203ENST00000612672 RUSC1Q9BVN2 902 aa25.64■■□□□ 1.7
MMP28-203ENST00000612672 DNAJC25Q9H1X3 360 aa25.64■■□□□ 1.7
MMP28-203ENST00000612672 SLC38A7Q9NVC3 462 aa25.64■■□□□ 1.7
MMP28-203ENST00000612672 YIPF1Q9Y548 306 aa25.64■■□□□ 1.7
MMP28-203ENST00000612672 NUB1Q9Y5A7 615 aa25.64■■□□□ 1.7
MMP28-203ENST00000612672 SDK1Q7Z5N4 2213 aa25.64■■□□□ 1.69
MMP28-203ENST00000612672 E9PMD0 336 aa25.63■■□□□ 1.69
MMP28-203ENST00000612672 K7ESF4 209 aa25.63■■□□□ 1.69
MMP28-203ENST00000612672 HIP1RO75146 1068 aa25.63■■□□□ 1.69
MMP28-203ENST00000612672 MUTP22033 750 aa25.63■■□□□ 1.69
MMP28-203ENST00000612672 CYP4A22Q5TCH4 519 aa25.63■■□□□ 1.69
MMP28-203ENST00000612672 ZNF280DQ6N043 979 aa25.63■■□□□ 1.69
MMP28-203ENST00000612672 TXNDC11Q6PKC3 985 aa25.63■■□□□ 1.69
MMP28-203ENST00000612672 MFSD6LQ8IWD5 586 aa25.63■■□□□ 1.69
MMP28-203ENST00000612672 CELF5Q8N6W0 485 aaKnown RBP25.63■■□□□ 1.69
MMP28-203ENST00000612672 DEPDC1BQ8WUY9 529 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms