RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 ZFP14Q9HCL3 533 aa14.59□□□□□ -0.07
HMGB1P24-201ENST00000611897 SH2B1Q9NRF2 756 aaPredicted RBP14.59□□□□□ -0.07
HMGB1P24-201ENST00000611897 CNTN3Q9P232 1028 aa14.59□□□□□ -0.07
HMGB1P24-201ENST00000611897 RBM19Q9Y4C8 960 aaKnown RBP14.59□□□□□ -0.07
HMGB1P24-201ENST00000611897 MED19A0JLT2 244 aaPredicted RBP14.58□□□□□ -0.08
HMGB1P24-201ENST00000611897 NRG2O14511 850 aaPredicted RBP14.58□□□□□ -0.08
HMGB1P24-201ENST00000611897 NCAM2O15394 837 aa14.58□□□□□ -0.08
HMGB1P24-201ENST00000611897 OR4Q2P0C623 313 aa14.58□□□□□ -0.08
HMGB1P24-201ENST00000611897 KCNE1P15382 129 aa14.58□□□□□ -0.08
HMGB1P24-201ENST00000611897 CCR2P41597 374 aa14.58□□□□□ -0.08
HMGB1P24-201ENST00000611897 PDIA5Q14554 519 aa14.58□□□□□ -0.08
HMGB1P24-201ENST00000611897 XKR4Q5GH76 650 aa14.58□□□□□ -0.08
HMGB1P24-201ENST00000611897 FAM78AQ5JUQ0 283 aa14.58□□□□□ -0.08
HMGB1P24-201ENST00000611897 POTEHQ6S545 545 aa14.58□□□□□ -0.08
HMGB1P24-201ENST00000611897 ALKAL1Q6UXT8 129 aa14.58□□□□□ -0.08
HMGB1P24-201ENST00000611897 ZNF852Q6ZMS4 543 aa14.58□□□□□ -0.08
HMGB1P24-201ENST00000611897 C1orf186Q6ZWK4 172 aa14.58□□□□□ -0.08
HMGB1P24-201ENST00000611897 RTL10Q7L3V2 364 aa14.58□□□□□ -0.08
HMGB1P24-201ENST00000611897 ELSPBP1Q96BH3 223 aa14.58□□□□□ -0.08
HMGB1P24-201ENST00000611897 KIF12Q96FN5 646 aa14.58□□□□□ -0.08
HMGB1P24-201ENST00000611897 CDK5RAP3Q96JB5 506 aa14.58□□□□□ -0.08
HMGB1P24-201ENST00000611897 SUSD3Q96L08 255 aa14.58□□□□□ -0.08
HMGB1P24-201ENST00000611897 ZNF512Q96ME7 567 aaPredicted RBP14.58□□□□□ -0.08
HMGB1P24-201ENST00000611897 PGLYRP2Q96PD5 576 aa14.58□□□□□ -0.08
HMGB1P24-201ENST00000611897 MMTAG2Q9BU76 263 aaKnown RBP14.58□□□□□ -0.08
HMGB1P24-201ENST00000611897 PTPRHQ9HD43 1115 aa14.58□□□□□ -0.08
HMGB1P24-201ENST00000611897 FBXO4Q9UKT5 387 aa14.58□□□□□ -0.08
HMGB1P24-201ENST00000611897 MRPS17Q9Y2R5 130 aaKnown RBP14.58□□□□□ -0.08
HMGB1P24-201ENST00000611897 TIMM13Q9Y5L4 95 aaPredicted RBP14.58□□□□□ -0.08
HMGB1P24-201ENST00000611897 NPHP3-ACAD11A0A0J9YXS1 232 aa14.57□□□□□ -0.08
HMGB1P24-201ENST00000611897 ABLIM1O14639 778 aa14.57□□□□□ -0.08
HMGB1P24-201ENST00000611897 ZNF197O14709 1029 aa14.57□□□□□ -0.08
HMGB1P24-201ENST00000611897 SPTLC1O15269 473 aa14.57□□□□□ -0.08
HMGB1P24-201ENST00000611897 MEFVO15553 781 aaPredicted RBP14.57□□□□□ -0.08
HMGB1P24-201ENST00000611897 TOM1L1O75674 476 aa14.57□□□□□ -0.08
HMGB1P24-201ENST00000611897 ABLIM3O94929 683 aa14.57□□□□□ -0.08
HMGB1P24-201ENST00000611897 PROZP22891 400 aa14.57□□□□□ -0.08
HMGB1P24-201ENST00000611897 FCARP24071 287 aa14.57□□□□□ -0.08
HMGB1P24-201ENST00000611897 MARCKSP29966 332 aaPredicted RBP14.57□□□□□ -0.08
HMGB1P24-201ENST00000611897 GDI1P31150 447 aa14.57□□□□□ -0.08
HMGB1P24-201ENST00000611897 RPL9P32969 192 aaKnown RBP14.57□□□□□ -0.08
HMGB1P24-201ENST00000611897 VIPR2P41587 438 aa14.57□□□□□ -0.08
HMGB1P24-201ENST00000611897 IL17AQ16552 155 aa14.57□□□□□ -0.08
HMGB1P24-201ENST00000611897 PRSS36Q5K4E3 855 aa14.57□□□□□ -0.08
HMGB1P24-201ENST00000611897 TPGS2Q68CL5 300 aa14.57□□□□□ -0.08
HMGB1P24-201ENST00000611897 RNF19BQ6ZMZ0 732 aa14.57□□□□□ -0.08
HMGB1P24-201ENST00000611897 TCEAL8Q8IYN2 117 aa14.57□□□□□ -0.08
HMGB1P24-201ENST00000611897 SUMF1Q8NBK3 374 aa14.57□□□□□ -0.08
HMGB1P24-201ENST00000611897 APPL2Q8NEU8 664 aa14.57□□□□□ -0.08
HMGB1P24-201ENST00000611897 DDX12PQ92771 950 aa14.57□□□□□ -0.08
HMGB1P24-201ENST00000611897 TRMT61BQ9BVS5 477 aaKnown RBP14.57□□□□□ -0.08
HMGB1P24-201ENST00000611897 OSBPL6Q9BZF3 934 aa14.57□□□□□ -0.08
HMGB1P24-201ENST00000611897 ASAH2Q9NR71 780 aa14.57□□□□□ -0.08
HMGB1P24-201ENST00000611897 SMG5Q9UPR3 1016 aaKnown RBP14.57□□□□□ -0.08
HMGB1P24-201ENST00000611897 YIPF1Q9Y548 306 aa14.57□□□□□ -0.08
HMGB1P24-201ENST00000611897 VWA3AA6NCI4 1184 aa14.56□□□□□ -0.08
HMGB1P24-201ENST00000611897 TULP1O00294 542 aaPredicted RBP14.56□□□□□ -0.08
HMGB1P24-201ENST00000611897 LAD1O00515 517 aa14.56□□□□□ -0.08
HMGB1P24-201ENST00000611897 CLDN3O15551 220 aa14.56□□□□□ -0.08
HMGB1P24-201ENST00000611897 PLS3P13797 630 aa14.56□□□□□ -0.08
HMGB1P24-201ENST00000611897 U2AF2P26368 475 aaKnown RBP eCLIP14.56□□□□□ -0.08
HMGB1P24-201ENST00000611897 MAGEA9P43362 315 aa14.56□□□□□ -0.08
HMGB1P24-201ENST00000611897 GUCY2FP51841 1108 aa14.56□□□□□ -0.08
HMGB1P24-201ENST00000611897 CDR1P51861 262 aa14.56□□□□□ -0.08
HMGB1P24-201ENST00000611897 SMTNP53814 917 aa14.56□□□□□ -0.08
HMGB1P24-201ENST00000611897 YWHAHQ04917 246 aaPredicted RBP14.56□□□□□ -0.08
HMGB1P24-201ENST00000611897 MTAPQ13126 283 aa14.56□□□□□ -0.08
HMGB1P24-201ENST00000611897 DHX8Q14562 1220 aaKnown RBP14.56□□□□□ -0.08
HMGB1P24-201ENST00000611897 TEAD2Q15562 447 aa14.56□□□□□ -0.08
HMGB1P24-201ENST00000611897 LPAL2Q16609 132 aa14.56□□□□□ -0.08
HMGB1P24-201ENST00000611897 SLC10A6Q3KNW5 377 aa14.56□□□□□ -0.08
HMGB1P24-201ENST00000611897 USP37Q86T82 979 aa14.56□□□□□ -0.08
HMGB1P24-201ENST00000611897 GPIHBP1Q8IV16 184 aa14.56□□□□□ -0.08
HMGB1P24-201ENST00000611897 ZSCAN18Q8TBC5 510 aaPredicted RBP14.56□□□□□ -0.08
HMGB1P24-201ENST00000611897 DNASE1L2Q92874 299 aa14.56□□□□□ -0.08
HMGB1P24-201ENST00000611897 FAM212AQ96EL1 285 aa14.56□□□□□ -0.08
HMGB1P24-201ENST00000611897 ZSWIM3Q96MP5 696 aa14.56□□□□□ -0.08
HMGB1P24-201ENST00000611897 ASB16Q96NS5 453 aa14.56□□□□□ -0.08
HMGB1P24-201ENST00000611897 NELL2Q99435 816 aa14.56□□□□□ -0.08
HMGB1P24-201ENST00000611897 AVENQ9NQS1 362 aaPredicted RBP14.56□□□□□ -0.08
HMGB1P24-201ENST00000611897 ZSCAN32Q9NX65 697 aa14.56□□□□□ -0.08
HMGB1P24-201ENST00000611897 CEP72Q9P209 647 aa14.56□□□□□ -0.08
HMGB1P24-201ENST00000611897 AFF4Q9UHB7 1163 aaKnown RBP14.56□□□□□ -0.08
HMGB1P24-201ENST00000611897 USP18Q9UMW8 372 aa14.56□□□□□ -0.08
HMGB1P24-201ENST00000611897 PCDHB8Q9UN66 801 aa14.56□□□□□ -0.08
HMGB1P24-201ENST00000611897 PCDHGA2Q9Y5H1 932 aa14.56□□□□□ -0.08
HMGB1P24-201ENST00000611897 PIAS3Q9Y6X2 628 aa14.56□□□□□ -0.08
HMGB1P24-201ENST00000611897 ANK1P16157 1881 aa14.56□□□□□ -0.08
HMGB1P24-201ENST00000611897 TBC1D4O60343 1298 aa14.55□□□□□ -0.08
HMGB1P24-201ENST00000611897 GUCY2CP25092 1073 aa14.55□□□□□ -0.08
HMGB1P24-201ENST00000611897 PRPHP41219 470 aa14.55□□□□□ -0.08
HMGB1P24-201ENST00000611897 TNFSF9P41273 254 aa14.55□□□□□ -0.08
HMGB1P24-201ENST00000611897 PPP2R3AQ06190 1150 aa14.55□□□□□ -0.08
HMGB1P24-201ENST00000611897 MRPL58Q14197 206 aaKnown RBP14.55□□□□□ -0.08
HMGB1P24-201ENST00000611897 PUM1Q14671 1186 aaKnown RBP eCLIP14.55□□□□□ -0.08
HMGB1P24-201ENST00000611897 RSPO4Q2I0M5 234 aaPredicted RBP14.55□□□□□ -0.08
HMGB1P24-201ENST00000611897 ZNF528Q3MIS6 628 aa14.55□□□□□ -0.08
HMGB1P24-201ENST00000611897 VITQ6UXI7 678 aa14.55□□□□□ -0.08
HMGB1P24-201ENST00000611897 DSTYKQ6XUX3 929 aa14.55□□□□□ -0.08
HMGB1P24-201ENST00000611897 TMEM161BQ8NDZ6 487 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms