RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 DDX23Q9BUQ8 820 aaKnown RBP18.34■□□□□ 0.53
NEK3-206ENST00000611833 HEMGNQ9BXL5 484 aa18.34■□□□□ 0.53
NEK3-206ENST00000611833 DCLK3Q9C098 648 aa18.34■□□□□ 0.53
NEK3-206ENST00000611833 PORCNQ9H237 461 aa18.34■□□□□ 0.53
NEK3-206ENST00000611833 DHX33Q9H6R0 707 aaKnown RBP18.34■□□□□ 0.53
NEK3-206ENST00000611833 ZNF302Q9NR11 478 aa18.34■□□□□ 0.53
NEK3-206ENST00000611833 SRCAPQ6ZRS2 3230 aa18.34■□□□□ 0.53
NEK3-206ENST00000611833 PROSCO94903 275 aa18.34■□□□□ 0.53
NEK3-206ENST00000611833 ATG7O95352 703 aa18.34■□□□□ 0.53
NEK3-206ENST00000611833 SSR1P43307 286 aaKnown RBP18.34■□□□□ 0.53
NEK3-206ENST00000611833 CNTN2Q02246 1040 aa18.34■□□□□ 0.53
NEK3-206ENST00000611833 CUL2Q13617 745 aa18.34■□□□□ 0.53
NEK3-206ENST00000611833 PTK6Q13882 451 aa18.34■□□□□ 0.53
NEK3-206ENST00000611833 ZBTB41Q5SVQ8 909 aa18.34■□□□□ 0.53
NEK3-206ENST00000611833 DAB2IPQ5VWQ8 1189 aa18.34■□□□□ 0.53
NEK3-206ENST00000611833 SLFN12LQ6IEE8 588 aa18.34■□□□□ 0.53
NEK3-206ENST00000611833 MON1BQ7L1V2 547 aa18.34■□□□□ 0.53
NEK3-206ENST00000611833 CCDC13Q8IYE1 715 aa18.34■□□□□ 0.53
NEK3-206ENST00000611833 ATL2Q8NHH9 583 aa18.34■□□□□ 0.53
NEK3-206ENST00000611833 SCLT1Q96NL6 688 aa18.34■□□□□ 0.53
NEK3-206ENST00000611833 ACTR5Q9H9F9 607 aaPredicted RBP18.34■□□□□ 0.53
NEK3-206ENST00000611833 ADAM22Q9P0K1 906 aa18.34■□□□□ 0.53
NEK3-206ENST00000611833 ANKFY1Q9P2R3 1169 aa18.34■□□□□ 0.53
NEK3-206ENST00000611833 LOC285556D6RIA3 1793 aa18.34■□□□□ 0.53
NEK3-206ENST00000611833 ATF2P15336 505 aa18.33■□□□□ 0.53
NEK3-206ENST00000611833 ACO1P21399 889 aaKnown RBP18.33■□□□□ 0.53
NEK3-206ENST00000611833 GNA15P30679 374 aa18.33■□□□□ 0.53
NEK3-206ENST00000611833 SSTR3P32745 418 aaPredicted RBP18.33■□□□□ 0.53
NEK3-206ENST00000611833 ADCY8P40145 1251 aa18.33■□□□□ 0.53
NEK3-206ENST00000611833 STXBP2Q15833 593 aa18.33■□□□□ 0.53
NEK3-206ENST00000611833 LONRF1Q17RB8 773 aa18.33■□□□□ 0.53
NEK3-206ENST00000611833 CCDC38Q502W7 563 aa18.33■□□□□ 0.53
NEK3-206ENST00000611833 TRIM72Q6ZMU5 477 aa18.33■□□□□ 0.53
NEK3-206ENST00000611833 APOBEC3FQ8IUX4 373 aaKnown RBP18.33■□□□□ 0.53
NEK3-206ENST00000611833 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.33■□□□□ 0.53
NEK3-206ENST00000611833 PRMT1Q99873 361 aaKnown RBP18.33■□□□□ 0.53
NEK3-206ENST00000611833 HERPUD2Q9BSE4 406 aa18.33■□□□□ 0.53
NEK3-206ENST00000611833 MSTO1Q9BUK6 570 aa18.33■□□□□ 0.53
NEK3-206ENST00000611833 APOBEC3GQ9HC16 384 aaKnown RBP18.33■□□□□ 0.53
NEK3-206ENST00000611833 MRPL47Q9HD33 250 aaKnown RBP18.33■□□□□ 0.53
NEK3-206ENST00000611833 AAASQ9NRG9 546 aa18.33■□□□□ 0.53
NEK3-206ENST00000611833 HOXC10Q9NYD6 342 aa18.33■□□□□ 0.53
NEK3-206ENST00000611833 ZNF541Q9H0D2 1346 aa18.33■□□□□ 0.53
NEK3-206ENST00000611833 SIP14410 1827 aa18.33■□□□□ 0.52
NEK3-206ENST00000611833 PEX10O60683 326 aa18.33■□□□□ 0.52
NEK3-206ENST00000611833 EDN1P05305 212 aa18.33■□□□□ 0.52
NEK3-206ENST00000611833 CFHP08603 1231 aa18.33■□□□□ 0.52
NEK3-206ENST00000611833 RALAP11233 206 aa18.33■□□□□ 0.52
NEK3-206ENST00000611833 CHKAP35790 457 aa18.33■□□□□ 0.52
NEK3-206ENST00000611833 NAMPTP43490 491 aa18.33■□□□□ 0.52
NEK3-206ENST00000611833 ITGA8P53708 1063 aa18.33■□□□□ 0.52
NEK3-206ENST00000611833 PLCB4Q15147 1175 aa18.33■□□□□ 0.52
NEK3-206ENST00000611833 MFSD5Q6N075 450 aa18.33■□□□□ 0.52
NEK3-206ENST00000611833 RHOT1Q8IXI2 618 aa18.33■□□□□ 0.52
NEK3-206ENST00000611833 ABRAQ8N0Z2 381 aa18.33■□□□□ 0.52
NEK3-206ENST00000611833 TRPM4Q8TD43 1214 aa18.33■□□□□ 0.52
NEK3-206ENST00000611833 ZNF317Q96PQ6 595 aaPredicted RBP18.33■□□□□ 0.52
NEK3-206ENST00000611833 OSBPL7Q9BZF2 842 aa18.33■□□□□ 0.52
NEK3-206ENST00000611833 ANAPC5Q9UJX4 755 aa18.33■□□□□ 0.52
NEK3-206ENST00000611833 USTQ9Y2C2 406 aa18.33■□□□□ 0.52
NEK3-206ENST00000611833 AFG3L2Q9Y4W6 797 aa18.33■□□□□ 0.52
NEK3-206ENST00000611833 SSC5DA1L4H1 1573 aa18.33■□□□□ 0.52
NEK3-206ENST00000611833 TP73O15350 636 aa18.32■□□□□ 0.52
NEK3-206ENST00000611833 LDHAP00338 332 aaKnown RBP18.32■□□□□ 0.52
NEK3-206ENST00000611833 PIGRP01833 764 aa18.32■□□□□ 0.52
NEK3-206ENST00000611833 ICAM3P32942 547 aa18.32■□□□□ 0.52
NEK3-206ENST00000611833 GJC1P36383 396 aa18.32■□□□□ 0.52
NEK3-206ENST00000611833 ARL2P36404 184 aa18.32■□□□□ 0.52
NEK3-206ENST00000611833 VPS41P49754 854 aa18.32■□□□□ 0.52
NEK3-206ENST00000611833 CAV1Q03135 178 aa18.32■□□□□ 0.52
NEK3-206ENST00000611833 SEPT14Q6ZU15 432 aa18.32■□□□□ 0.52
NEK3-206ENST00000611833 CCDC197Q8NCU1 140 aa18.32■□□□□ 0.52
NEK3-206ENST00000611833 SLC7A3Q8WY07 619 aa18.32■□□□□ 0.52
NEK3-206ENST00000611833 KCNN1Q92952 543 aa18.32■□□□□ 0.52
NEK3-206ENST00000611833 TARS2Q9BW92 718 aaKnown RBP18.32■□□□□ 0.52
NEK3-206ENST00000611833 HOMER3Q9NSC5 361 aa18.32■□□□□ 0.52
NEK3-206ENST00000611833 DNAJC17Q9NVM6 304 aaKnown RBP18.32■□□□□ 0.52
NEK3-206ENST00000611833 R3HDM2Q9Y2K5 976 aaKnown RBP18.32■□□□□ 0.52
NEK3-206ENST00000611833 PSTPIP1O43586 416 aa18.32■□□□□ 0.52
NEK3-206ENST00000611833 PTP4A2Q12974 167 aa18.32■□□□□ 0.52
NEK3-206ENST00000611833 TNFAIP8L3Q5GJ75 292 aa18.32■□□□□ 0.52
NEK3-206ENST00000611833 ICE2Q659A1 982 aa18.32■□□□□ 0.52
NEK3-206ENST00000611833 RHBDF2Q6PJF5 856 aa18.32■□□□□ 0.52
NEK3-206ENST00000611833 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.32■□□□□ 0.52
NEK3-206ENST00000611833 ANKS4BQ8N8V4 417 aa18.32■□□□□ 0.52
NEK3-206ENST00000611833 IPO4Q8TEX9 1081 aaKnown RBP18.32■□□□□ 0.52
NEK3-206ENST00000611833 TRAIPQ9BWF2 469 aa18.32■□□□□ 0.52
NEK3-206ENST00000611833 FBXO40Q9UH90 709 aa18.32■□□□□ 0.52
NEK3-206ENST00000611833 UMODL1Q5DID0 1318 aa18.31■□□□□ 0.52
NEK3-206ENST00000611833 THAP12O43422 761 aa18.31■□□□□ 0.52
NEK3-206ENST00000611833 IFNAR2P48551 515 aa18.31■□□□□ 0.52
NEK3-206ENST00000611833 NOMO3P69849 1222 aa18.31■□□□□ 0.52
NEK3-206ENST00000611833 MAMLD1Q13495 774 aa18.31■□□□□ 0.52
NEK3-206ENST00000611833 ZNF568Q3ZCX4 644 aa18.31■□□□□ 0.52
NEK3-206ENST00000611833 CHADLQ6NUI6 762 aa18.31■□□□□ 0.52
NEK3-206ENST00000611833 SUGP1Q8IWZ8 645 aaKnown RBP18.31■□□□□ 0.52
NEK3-206ENST00000611833 RBBP8NLQ8NC74 664 aaPredicted RBP18.31■□□□□ 0.52
NEK3-206ENST00000611833 DNERQ8NFT8 737 aa18.31■□□□□ 0.52
NEK3-206ENST00000611833 SCINQ9Y6U3 715 aa18.31■□□□□ 0.52
NEK3-206ENST00000611833 LTBP3Q9NS15 1303 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms