RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 CCDC47Q96A33 483 aaKnown RBP28.22■■■□□ 2.11
VEGFA-226ENST00000611736 S1PR5Q9H228 398 aa28.22■■■□□ 2.11
VEGFA-226ENST00000611736 AGPAT3Q9NRZ7 376 aa28.22■■■□□ 2.11
VEGFA-226ENST00000611736 HSPBP1Q9NZL4 362 aa28.22■■■□□ 2.11
VEGFA-226ENST00000611736 SPDYE4A6NLX3 237 aa28.21■■■□□ 2.11
VEGFA-226ENST00000611736 CLIC2O15247 247 aa28.21■■■□□ 2.11
VEGFA-226ENST00000611736 WNT7BP56706 349 aa28.21■■■□□ 2.11
VEGFA-226ENST00000611736 RARS2Q5T160 578 aaKnown RBP28.21■■■□□ 2.11
VEGFA-226ENST00000611736 HS2ST1Q7LGA3 356 aa28.21■■■□□ 2.11
VEGFA-226ENST00000611736 EFCAB13Q8IY85 973 aa28.21■■■□□ 2.11
VEGFA-226ENST00000611736 CCDC34Q96HJ3 373 aa28.21■■■□□ 2.11
VEGFA-226ENST00000611736 C2CD2Q9Y426 696 aa28.21■■■□□ 2.11
VEGFA-226ENST00000611736 PPEF2O14830 753 aa28.2■■■□□ 2.1
VEGFA-226ENST00000611736 KIAA0391O15091 583 aaKnown RBP28.2■■■□□ 2.1
VEGFA-226ENST00000611736 FAM160A1Q05DH4 1040 aa28.2■■■□□ 2.1
VEGFA-226ENST00000611736 SNW1Q13573 536 aaKnown RBP28.2■■■□□ 2.1
VEGFA-226ENST00000611736 KNOP1Q1ED39 458 aaKnown RBP28.2■■■□□ 2.1
VEGFA-226ENST00000611736 KANK3Q6NY19 840 aa28.2■■■□□ 2.1
VEGFA-226ENST00000611736 PDXDC1Q6P996 788 aa28.2■■■□□ 2.1
VEGFA-226ENST00000611736 ENGASEQ8NFI3 743 aa28.2■■■□□ 2.1
VEGFA-226ENST00000611736 MAN1C1Q9NR34 630 aa28.2■■■□□ 2.1
VEGFA-226ENST00000611736 SPATA31D3P0C874 917 aa28.19■■■□□ 2.1
VEGFA-226ENST00000611736 CYP2J2P51589 502 aa28.19■■■□□ 2.1
VEGFA-226ENST00000611736 SPATA31D4Q6ZUB0 917 aa28.19■■■□□ 2.1
VEGFA-226ENST00000611736 SUSD3Q96L08 255 aa28.19■■■□□ 2.1
VEGFA-226ENST00000611736 CLSTN3Q9BQT9 956 aa28.19■■■□□ 2.1
VEGFA-226ENST00000611736 CDH22Q9UJ99 828 aa28.19■■■□□ 2.1
VEGFA-226ENST00000611736 SCN1AP35498 2009 aa28.18■■■□□ 2.1
VEGFA-226ENST00000611736 ADAM12O43184 909 aa28.18■■■□□ 2.1
VEGFA-226ENST00000611736 TGM5O43548 720 aa28.18■■■□□ 2.1
VEGFA-226ENST00000611736 TFAMQ00059 246 aaKnown RBP28.18■■■□□ 2.1
VEGFA-226ENST00000611736 C9orf57Q5W0N0 161 aa28.18■■■□□ 2.1
VEGFA-226ENST00000611736 CBWD2Q8IUF1 395 aa28.18■■■□□ 2.1
VEGFA-226ENST00000611736 PDE11AQ9HCR9 933 aa28.18■■■□□ 2.1
VEGFA-226ENST00000611736 DPP3Q9NY33 737 aa28.18■■■□□ 2.1
VEGFA-226ENST00000611736 ZNF233A6NK53 670 aa28.17■■■□□ 2.1
VEGFA-226ENST00000611736 SYN3O14994 580 aa28.17■■■□□ 2.1
VEGFA-226ENST00000611736 GADD45BO75293 160 aaPredicted RBP28.17■■■□□ 2.1
VEGFA-226ENST00000611736 RHOBTB3O94955 611 aa28.17■■■□□ 2.1
VEGFA-226ENST00000611736 SNRPFP62306 86 aaKnown RBP28.17■■■□□ 2.1
VEGFA-226ENST00000611736 PNOCQ13519 176 aa28.17■■■□□ 2.1
VEGFA-226ENST00000611736 VARS2Q5ST30 1063 aaKnown RBP28.17■■■□□ 2.1
VEGFA-226ENST00000611736 CES5AQ6NT32 575 aa28.17■■■□□ 2.1
VEGFA-226ENST00000611736 TMC5Q6UXY8 1006 aa28.17■■■□□ 2.1
VEGFA-226ENST00000611736 ANKS3Q6ZW76 656 aa28.17■■■□□ 2.1
VEGFA-226ENST00000611736 SUSD6Q92537 303 aa28.17■■■□□ 2.1
VEGFA-226ENST00000611736 ADAM7Q9H2U9 754 aa28.17■■■□□ 2.1
VEGFA-226ENST00000611736 SFXN1Q9H9B4 322 aa28.17■■■□□ 2.1
VEGFA-226ENST00000611736 MTRRQ9UBK8 725 aa28.17■■■□□ 2.1
VEGFA-226ENST00000611736 MTCL1Q9Y4B5 1905 aaKnown RBP28.16■■■□□ 2.1
VEGFA-226ENST00000611736 WEE2P0C1S8 567 aa28.16■■■□□ 2.1
VEGFA-226ENST00000611736 RSPO2Q6UXX9 243 aaPredicted RBP28.16■■■□□ 2.1
VEGFA-226ENST00000611736 NT5DC4Q86YG4 428 aa28.16■■■□□ 2.1
VEGFA-226ENST00000611736 RDH13Q8NBN7 331 aa28.16■■■□□ 2.1
VEGFA-226ENST00000611736 FEZF2Q8TBJ5 459 aa28.16■■■□□ 2.1
VEGFA-226ENST00000611736 FAM84AQ96KN4 292 aa28.16■■■□□ 2.1
VEGFA-226ENST00000611736 CGNQ9P2M7 1197 aaKnown RBP28.16■■■□□ 2.1
VEGFA-226ENST00000611736 PCDHB8Q9UN66 801 aa28.16■■■□□ 2.1
VEGFA-226ENST00000611736 CDY1Q9Y6F8 540 aa28.16■■■□□ 2.1
VEGFA-226ENST00000611736 ANO9A1A5B4 782 aa28.15■■■□□ 2.1
VEGFA-226ENST00000611736 OR1D2P34982 312 aa28.15■■■□□ 2.1
VEGFA-226ENST00000611736 ZP2Q05996 745 aa28.15■■■□□ 2.1
VEGFA-226ENST00000611736 ITIH3Q06033 890 aa28.15■■■□□ 2.1
VEGFA-226ENST00000611736 KCNB1Q14721 858 aa28.15■■■□□ 2.1
VEGFA-226ENST00000611736 CBX2Q14781 532 aaPredicted RBP28.15■■■□□ 2.1
VEGFA-226ENST00000611736 ELMSAN1Q6PJG2 1045 aa28.15■■■□□ 2.1
VEGFA-226ENST00000611736 DSTYKQ6XUX3 929 aa28.15■■■□□ 2.1
VEGFA-226ENST00000611736 ADHFE1Q8IWW8 467 aa28.15■■■□□ 2.1
VEGFA-226ENST00000611736 APPL2Q8NEU8 664 aa28.15■■■□□ 2.1
VEGFA-226ENST00000611736 GOLGA5Q8TBA6 731 aa28.15■■■□□ 2.1
VEGFA-226ENST00000611736 KIAA1586Q9HCI6 787 aa28.15■■■□□ 2.1
VEGFA-226ENST00000611736 PRKAG3Q9UGI9 489 aa28.15■■■□□ 2.1
VEGFA-226ENST00000611736 BACE2Q9Y5Z0 518 aa28.15■■■□□ 2.1
VEGFA-226ENST00000611736 PIRO00625 290 aa28.14■■■□□ 2.1
VEGFA-226ENST00000611736 SSTR3P32745 418 aaPredicted RBP28.14■■■□□ 2.1
VEGFA-226ENST00000611736 AARSP49588 968 aaKnown RBP eCLIP28.14■■■□□ 2.11e-6■■■■□ 20.6
VEGFA-226ENST00000611736 LILRA4P59901 499 aa28.14■■■□□ 2.1
VEGFA-226ENST00000611736 SNRNP35Q16560 246 aaKnown RBP28.14■■■□□ 2.1
VEGFA-226ENST00000611736 LMBRD2Q68DH5 695 aaPredicted RBP28.14■■■□□ 2.1
VEGFA-226ENST00000611736 LILRA6Q6PI73 481 aa28.14■■■□□ 2.1
VEGFA-226ENST00000611736 XXYLT1Q8NBI6 393 aa28.14■■■□□ 2.1
VEGFA-226ENST00000611736 KREMEN2Q8NCW0 462 aa28.14■■■□□ 2.1
VEGFA-226ENST00000611736 CACTINQ8WUQ7 758 aaKnown RBP28.14■■■□□ 2.1
VEGFA-226ENST00000611736 DPP7Q9UHL4 492 aa28.14■■■□□ 2.1
VEGFA-226ENST00000611736 MAPK8IP1Q9UQF2 711 aa28.14■■■□□ 2.1
VEGFA-226ENST00000611736 TIMM13Q9Y5L4 95 aaPredicted RBP28.14■■■□□ 2.1
VEGFA-226ENST00000611736 M0QZQ0 153 aa28.13■■■□□ 2.09
VEGFA-226ENST00000611736 SPTLC1O15269 473 aa28.13■■■□□ 2.09
VEGFA-226ENST00000611736 C12orf56Q8IXR9 622 aa28.13■■■□□ 2.09
VEGFA-226ENST00000611736 KCTD10Q9H3F6 313 aa28.13■■■□□ 2.09
VEGFA-226ENST00000611736 CD320Q9NPF0 282 aa28.13■■■□□ 2.09
VEGFA-226ENST00000611736 H7C4K7 107 aa28.12■■■□□ 2.09
VEGFA-226ENST00000611736 RFPL2O75678 378 aa28.12■■■□□ 2.09
VEGFA-226ENST00000611736 C1RP00736 705 aa28.12■■■□□ 2.09
VEGFA-226ENST00000611736 RAB33AQ14088 237 aa28.12■■■□□ 2.09
VEGFA-226ENST00000611736 CTXN3Q4LDR2 81 aa28.12■■■□□ 2.09
VEGFA-226ENST00000611736 GJD3Q8N144 294 aa28.12■■■□□ 2.09
VEGFA-226ENST00000611736 ERCC4Q92889 916 aaPredicted RBP28.12■■■□□ 2.09
VEGFA-226ENST00000611736 RIPOR3Q96MK2 946 aa28.12■■■□□ 2.09
VEGFA-226ENST00000611736 TIGD1Q96MW7 591 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms