RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 DHX8Q14562 1220 aaKnown RBP23.69■■□□□ 1.38
CBWD3-207ENST00000611426 SLC10A6Q3KNW5 377 aa23.69■■□□□ 1.38
CBWD3-207ENST00000611426 VARS2Q5ST30 1063 aaKnown RBP23.69■■□□□ 1.38
CBWD3-207ENST00000611426 RTL10Q7L3V2 364 aa23.69■■□□□ 1.38
CBWD3-207ENST00000611426 KRI1Q8N9T8 703 aaKnown RBP23.69■■□□□ 1.38
CBWD3-207ENST00000611426 BICD1Q96G01 975 aa23.69■■□□□ 1.38
CBWD3-207ENST00000611426 CDH7Q9ULB5 785 aa23.69■■□□□ 1.38
CBWD3-207ENST00000611426 NUMBLQ9Y6R0 609 aa23.69■■□□□ 1.38
CBWD3-207ENST00000611426 DMDP11532 3685 aa23.68■■□□□ 1.38
CBWD3-207ENST00000611426 MEFVO15553 781 aaPredicted RBP23.68■■□□□ 1.38
CBWD3-207ENST00000611426 POU2F2P09086 479 aa23.68■■□□□ 1.38
CBWD3-207ENST00000611426 NCKAP1LP55160 1127 aa23.68■■□□□ 1.38
CBWD3-207ENST00000611426 MCL1Q07820 350 aa23.68■■□□□ 1.38
CBWD3-207ENST00000611426 CCDC73Q6ZRK6 1079 aa23.68■■□□□ 1.38
CBWD3-207ENST00000611426 RBM43Q6ZSC3 357 aaKnown RBP23.68■■□□□ 1.38
CBWD3-207ENST00000611426 HAUS6Q7Z4H7 955 aa23.68■■□□□ 1.38
CBWD3-207ENST00000611426 GPBP1Q86WP2 473 aa23.68■■□□□ 1.38
CBWD3-207ENST00000611426 RASSF8Q8NHQ8 419 aa23.68■■□□□ 1.38
CBWD3-207ENST00000611426 ZNF461Q8TAF7 563 aa23.68■■□□□ 1.38
CBWD3-207ENST00000611426 RTP3Q9BQQ7 232 aa23.68■■□□□ 1.38
CBWD3-207ENST00000611426 FBXO2Q9UK22 296 aaPredicted RBP23.68■■□□□ 1.38
CBWD3-207ENST00000611426 ODF2LQ9ULJ1 636 aa23.68■■□□□ 1.38
CBWD3-207ENST00000611426 CA14Q9ULX7 337 aa23.68■■□□□ 1.38
CBWD3-207ENST00000611426 SRPRBQ9Y5M8 271 aaKnown RBP23.68■■□□□ 1.38
CBWD3-207ENST00000611426 KRBA1A5PL33 1030 aa23.67■■□□□ 1.38
CBWD3-207ENST00000611426 SYN3O14994 580 aa23.67■■□□□ 1.38
CBWD3-207ENST00000611426 RFX1P22670 979 aa23.67■■□□□ 1.38
CBWD3-207ENST00000611426 LONP1P36776 959 aaKnown RBP23.67■■□□□ 1.38
CBWD3-207ENST00000611426 SLC8B1Q6J4K2 584 aa23.67■■□□□ 1.38
CBWD3-207ENST00000611426 MYCT1Q8N699 235 aa23.67■■□□□ 1.38
CBWD3-207ENST00000611426 ITFG1Q8TB96 612 aa23.67■■□□□ 1.38
CBWD3-207ENST00000611426 GPR152Q8TDT2 470 aa23.67■■□□□ 1.38
CBWD3-207ENST00000611426 FGF13Q92913 245 aa23.67■■□□□ 1.38
CBWD3-207ENST00000611426 REEP2Q9BRK0 252 aa23.67■■□□□ 1.38
CBWD3-207ENST00000611426 GOLPH3LQ9H4A5 285 aa23.67■■□□□ 1.38
CBWD3-207ENST00000611426 CLSTN2Q9H4D0 955 aa23.67■■□□□ 1.38
CBWD3-207ENST00000611426 HCFC1R1Q9NWW0 138 aa23.67■■□□□ 1.38
CBWD3-207ENST00000611426 ZFHX2Q9C0A1 2572 aaPredicted RBP23.67■■□□□ 1.38
CBWD3-207ENST00000611426 H7C4K7 107 aa23.66■■□□□ 1.38
CBWD3-207ENST00000611426 KRT18P05783 430 aaKnown RBP23.66■■□□□ 1.38
CBWD3-207ENST00000611426 ELF1P32519 619 aa23.66■■□□□ 1.38
CBWD3-207ENST00000611426 ARPP19P56211 112 aa23.66■■□□□ 1.38
CBWD3-207ENST00000611426 ROR1Q01973 937 aa23.66■■□□□ 1.38
CBWD3-207ENST00000611426 SNW1Q13573 536 aaKnown RBP23.66■■□□□ 1.38
CBWD3-207ENST00000611426 PABPC1LQ4VXU2 614 aaKnown RBP23.66■■□□□ 1.38
CBWD3-207ENST00000611426 RESP18Q5W5W9 173 aa23.66■■□□□ 1.38
CBWD3-207ENST00000611426 PARM1Q6UWI2 310 aa23.66■■□□□ 1.38
CBWD3-207ENST00000611426 FMR1NBQ8N0W7 255 aaPredicted RBP23.66■■□□□ 1.38
CBWD3-207ENST00000611426 FSIP1Q8NA03 581 aa23.66■■□□□ 1.38
CBWD3-207ENST00000611426 HAPLN2Q9GZV7 340 aa23.66■■□□□ 1.38
CBWD3-207ENST00000611426 PLEKHA5Q9HAU0 1116 aa23.66■■□□□ 1.38
CBWD3-207ENST00000611426 DNMT3BQ9UBC3 853 aaKnown RBP23.66■■□□□ 1.38
CBWD3-207ENST00000611426 HPSEQ9Y251 543 aa23.66■■□□□ 1.38
CBWD3-207ENST00000611426 FAM13AO94988 1023 aa23.65■■□□□ 1.38
CBWD3-207ENST00000611426 CLTAP09496 248 aa23.65■■□□□ 1.38
CBWD3-207ENST00000611426 CXCL8P10145 99 aa23.65■■□□□ 1.38
CBWD3-207ENST00000611426 LIG4P49917 911 aa23.65■■□□□ 1.38
CBWD3-207ENST00000611426 GRIN1Q05586 938 aa23.65■■□□□ 1.38
CBWD3-207ENST00000611426 KARSQ15046 597 aaKnown RBP23.65■■□□□ 1.38
CBWD3-207ENST00000611426 LRSAM1Q6UWE0 723 aa23.65■■□□□ 1.38
CBWD3-207ENST00000611426 LRRC15Q8TF66 581 aa23.65■■□□□ 1.38
CBWD3-207ENST00000611426 FGF14Q92915 247 aa23.65■■□□□ 1.38
CBWD3-207ENST00000611426 SUSD3Q96L08 255 aa23.65■■□□□ 1.38
CBWD3-207ENST00000611426 RPP25Q9BUL9 199 aaKnown RBP23.65■■□□□ 1.38
CBWD3-207ENST00000611426 NUP62CLQ9H1M0 184 aa23.65■■□□□ 1.38
CBWD3-207ENST00000611426 PARVGQ9HBI0 331 aa23.65■■□□□ 1.38
CBWD3-207ENST00000611426 BLOC1S4Q9NUP1 217 aa23.65■■□□□ 1.38
CBWD3-207ENST00000611426 TUBGCP4Q9UGJ1 667 aa23.65■■□□□ 1.38
CBWD3-207ENST00000611426 TBX20Q9UMR3 447 aa23.65■■□□□ 1.38
CBWD3-207ENST00000611426 WDR27A2RRH5 827 aa23.65■■□□□ 1.38
CBWD3-207ENST00000611426 TBC1D4O60343 1298 aa23.65■■□□□ 1.38
CBWD3-207ENST00000611426 ABLIM3O94929 683 aa23.65■■□□□ 1.38
CBWD3-207ENST00000611426 PLCG1P19174 1290 aa23.65■■□□□ 1.38
CBWD3-207ENST00000611426 SCP2P22307 547 aa23.65■■□□□ 1.38
CBWD3-207ENST00000611426 MARCKSP29966 332 aaPredicted RBP23.65■■□□□ 1.38
CBWD3-207ENST00000611426 SPAG1Q07617 926 aa23.65■■□□□ 1.38
CBWD3-207ENST00000611426 MRPL58Q14197 206 aaKnown RBP23.65■■□□□ 1.38
CBWD3-207ENST00000611426 MCM6Q14566 821 aa23.65■■□□□ 1.38
CBWD3-207ENST00000611426 MTSS1LQ765P7 747 aa23.65■■□□□ 1.38
CBWD3-207ENST00000611426 RAD54LQ92698 747 aa23.65■■□□□ 1.38
CBWD3-207ENST00000611426 ZHX3Q9H4I2 956 aa23.65■■□□□ 1.38
CBWD3-207ENST00000611426 SLC2A4RGQ9NR83 387 aa23.65■■□□□ 1.38
CBWD3-207ENST00000611426 KCNH3Q9ULD8 1083 aa23.65■■□□□ 1.38
CBWD3-207ENST00000611426 PDCD11Q14690 1871 aaKnown RBP23.64■■□□□ 1.37
CBWD3-207ENST00000611426 K7ENM7 598 aa23.64■■□□□ 1.37
CBWD3-207ENST00000611426 PRRG1O14668 218 aa23.64■■□□□ 1.37
CBWD3-207ENST00000611426 HNRNPDLO14979 420 aaKnown RBP23.64■■□□□ 1.37
CBWD3-207ENST00000611426 GFRA3O60609 400 aa23.64■■□□□ 1.37
CBWD3-207ENST00000611426 LRG1P02750 347 aa23.64■■□□□ 1.37
CBWD3-207ENST00000611426 KYAT1Q16773 422 aa23.64■■□□□ 1.37
CBWD3-207ENST00000611426 CTXN3Q4LDR2 81 aa23.64■■□□□ 1.37
CBWD3-207ENST00000611426 SHC4Q6S5L8 630 aa23.64■■□□□ 1.37
CBWD3-207ENST00000611426 CCDC105Q8IYK2 499 aa23.64■■□□□ 1.37
CBWD3-207ENST00000611426 APPL2Q8NEU8 664 aa23.64■■□□□ 1.37
CBWD3-207ENST00000611426 KCNN1Q92952 543 aa23.64■■□□□ 1.37
CBWD3-207ENST00000611426 CYP4F11Q9HBI6 524 aa23.64■■□□□ 1.37
CBWD3-207ENST00000611426 FBXL5Q9UKA1 691 aa23.64■■□□□ 1.37
CBWD3-207ENST00000611426 MRPS23Q9Y3D9 190 aaKnown RBP23.64■■□□□ 1.37
CBWD3-207ENST00000611426 TTC26A0AVF1 554 aa23.63■■□□□ 1.37
CBWD3-207ENST00000611426 SYCE3A1L190 88 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms