RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 CFAP157Q5JU67 520 aa13.18□□□□□ -0.3
CDCA3-212ENST00000604599 PPP1R18Q6NYC8 613 aa13.18□□□□□ -0.3
CDCA3-212ENST00000604599 SLC47A2Q86VL8 602 aa13.18□□□□□ -0.3
CDCA3-212ENST00000604599 NSL1Q96IY1 281 aa13.18□□□□□ -0.3
CDCA3-212ENST00000604599 CYTH2Q99418 400 aa13.18□□□□□ -0.3
CDCA3-212ENST00000604599 OLFML3Q9NRN5 406 aa13.18□□□□□ -0.3
CDCA3-212ENST00000604599 AGPAT3Q9NRZ7 376 aa13.18□□□□□ -0.3
CDCA3-212ENST00000604599 MTMR4Q9NYA4 1195 aa13.18□□□□□ -0.3
CDCA3-212ENST00000604599 ATF5Q9Y2D1 282 aaPredicted RBP13.18□□□□□ -0.3
CDCA3-212ENST00000604599 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.18□□□□□ -0.3
CDCA3-212ENST00000604599 UMODL1Q5DID0 1318 aa13.17□□□□□ -0.3
CDCA3-212ENST00000604599 ZBTB39O15060 712 aa13.17□□□□□ -0.3
CDCA3-212ENST00000604599 CYP26A1O43174 497 aa13.17□□□□□ -0.3
CDCA3-212ENST00000604599 KRT4P19013 534 aa13.17□□□□□ -0.3
CDCA3-212ENST00000604599 NR1H3Q13133 447 aa13.17□□□□□ -0.3
CDCA3-212ENST00000604599 TCEAL1Q15170 157 aa13.17□□□□□ -0.3
CDCA3-212ENST00000604599 P3H1Q32P28 736 aa13.17□□□□□ -0.3
CDCA3-212ENST00000604599 RINT1Q6NUQ1 792 aa13.17□□□□□ -0.3
CDCA3-212ENST00000604599 ARHGAP18Q8N392 663 aa13.17□□□□□ -0.3
CDCA3-212ENST00000604599 ETNPPLQ8TBG4 499 aa13.17□□□□□ -0.3
CDCA3-212ENST00000604599 CFAP57Q96MR6 1250 aa13.17□□□□□ -0.3
CDCA3-212ENST00000604599 MKNK1Q9BUB5 465 aa13.17□□□□□ -0.3
CDCA3-212ENST00000604599 hCG_2014768A0A024R1R8 64 aa13.17□□□□□ -0.3
CDCA3-212ENST00000604599 TYROBPO43914 113 aa13.17□□□□□ -0.3
CDCA3-212ENST00000604599 USP1O94782 785 aa13.17□□□□□ -0.3
CDCA3-212ENST00000604599 ESRRAP11474 423 aaPredicted RBP13.17□□□□□ -0.3
CDCA3-212ENST00000604599 GCLMP48507 274 aa13.17□□□□□ -0.3
CDCA3-212ENST00000604599 DSG1Q02413 1049 aa13.17□□□□□ -0.3
CDCA3-212ENST00000604599 ZNF543Q08ER8 600 aa13.17□□□□□ -0.3
CDCA3-212ENST00000604599 SYDE1Q6ZW31 735 aaPredicted RBP13.17□□□□□ -0.3
CDCA3-212ENST00000604599 GSTA5Q7RTV2 222 aa13.17□□□□□ -0.3
CDCA3-212ENST00000604599 SDCCAG8Q86SQ7 713 aaPredicted RBP13.17□□□□□ -0.3
CDCA3-212ENST00000604599 NR1H4Q96RI1 486 aaPredicted RBP13.17□□□□□ -0.3
CDCA3-212ENST00000604599 DNAAF2Q9NVR5 837 aaKnown RBP13.17□□□□□ -0.3
CDCA3-212ENST00000604599 ARMCX1Q9P291 453 aa13.17□□□□□ -0.3
CDCA3-212ENST00000604599 ANAPC7Q9UJX3 599 aa13.17□□□□□ -0.3
CDCA3-212ENST00000604599 NHSQ6T4R5 1651 aa13.17□□□□□ -0.3
CDCA3-212ENST00000604599 GOLGA8RI6L899 631 aa13.16□□□□□ -0.3
CDCA3-212ENST00000604599 ZBTB5O15062 677 aa13.16□□□□□ -0.3
CDCA3-212ENST00000604599 MAN1A1P33908 653 aa13.16□□□□□ -0.3
CDCA3-212ENST00000604599 PGM1P36871 562 aa13.16□□□□□ -0.3
CDCA3-212ENST00000604599 CDK7P50613 346 aa13.16□□□□□ -0.3
CDCA3-212ENST00000604599 SEPT7Q16181 437 aaKnown RBP13.16□□□□□ -0.3
CDCA3-212ENST00000604599 TBC1D9BQ66K14 1250 aa13.16□□□□□ -0.3
CDCA3-212ENST00000604599 TTC1Q99614 292 aa13.16□□□□□ -0.3
CDCA3-212ENST00000604599 CENPKQ9BS16 269 aa13.16□□□□□ -0.3
CDCA3-212ENST00000604599 RTFDC1Q9BY42 306 aaPredicted RBP13.16□□□□□ -0.3
CDCA3-212ENST00000604599 ETNK2Q9NVF9 386 aa13.16□□□□□ -0.3
CDCA3-212ENST00000604599 LARSQ9P2J5 1176 aaKnown RBP13.16□□□□□ -0.3
CDCA3-212ENST00000604599 NOCTQ9UK39 431 aaKnown RBP13.16□□□□□ -0.3
CDCA3-212ENST00000604599 RNASEH1O60930 286 aaKnown RBP13.16□□□□□ -0.3
CDCA3-212ENST00000604599 BAG2O95816 211 aa13.16□□□□□ -0.3
CDCA3-212ENST00000604599 RALAP11233 206 aa13.16□□□□□ -0.3
CDCA3-212ENST00000604599 AKR1B1P15121 316 aa13.16□□□□□ -0.3
CDCA3-212ENST00000604599 INHBCP55103 352 aa13.16□□□□□ -0.3
CDCA3-212ENST00000604599 PPP4CP60510 307 aa13.16□□□□□ -0.3
CDCA3-212ENST00000604599 CCDC62Q6P9F0 684 aa13.16□□□□□ -0.3
CDCA3-212ENST00000604599 DPP8Q6V1X1 898 aaPredicted RBP13.16□□□□□ -0.3
CDCA3-212ENST00000604599 LRRC6Q86X45 466 aa13.16□□□□□ -0.3
CDCA3-212ENST00000604599 CCDC89Q8N998 374 aa13.16□□□□□ -0.3
CDCA3-212ENST00000604599 NCSTNQ92542 709 aa13.16□□□□□ -0.3
CDCA3-212ENST00000604599 GPR101Q96P66 508 aaPredicted RBP13.16□□□□□ -0.3
CDCA3-212ENST00000604599 KLF6Q99612 283 aaPredicted RBP13.16□□□□□ -0.3
CDCA3-212ENST00000604599 PCIF1Q9H4Z3 704 aa13.16□□□□□ -0.3
CDCA3-212ENST00000604599 GTF3C4Q9UKN8 822 aa13.16□□□□□ -0.3
CDCA3-212ENST00000604599 MYH11P35749 1972 aa13.16□□□□□ -0.3
CDCA3-212ENST00000604599 MYH14Q7Z406 1995 aaKnown RBP13.16□□□□□ -0.3
CDCA3-212ENST00000604599 A6NJR5 290 aa13.16□□□□□ -0.3
CDCA3-212ENST00000604599 EIF3DO15371 548 aaKnown RBP eCLIP13.16□□□□□ -0.3
CDCA3-212ENST00000604599 ZSCAN9O15535 394 aaPredicted RBP13.16□□□□□ -0.3
CDCA3-212ENST00000604599 CYP1A2P05177 515 aa13.16□□□□□ -0.3
CDCA3-212ENST00000604599 ABHD2P08910 425 aa13.16□□□□□ -0.3
CDCA3-212ENST00000604599 MAPK4P31152 587 aa13.16□□□□□ -0.3
CDCA3-212ENST00000604599 GJC1P36383 396 aa13.16□□□□□ -0.3
CDCA3-212ENST00000604599 ARFIP2P53365 341 aa13.16□□□□□ -0.3
CDCA3-212ENST00000604599 USP46P62068 366 aa13.16□□□□□ -0.3
CDCA3-212ENST00000604599 GSTO1P78417 241 aa13.16□□□□□ -0.3
CDCA3-212ENST00000604599 ARHGAP4P98171 946 aa13.16□□□□□ -0.3
CDCA3-212ENST00000604599 FMO1Q01740 532 aa13.16□□□□□ -0.3
CDCA3-212ENST00000604599 PPP3CAQ08209 521 aa13.16□□□□□ -0.3
CDCA3-212ENST00000604599 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.16□□□□□ -0.3
CDCA3-212ENST00000604599 CFAP61Q8NHU2 1237 aa13.16□□□□□ -0.3
CDCA3-212ENST00000604599 FNBP1Q96RU3 617 aa13.16□□□□□ -0.3
CDCA3-212ENST00000604599 P2RX7Q99572 595 aaKnown RBP13.16□□□□□ -0.3
CDCA3-212ENST00000604599 NAP1L4Q99733 375 aaKnown RBP13.16□□□□□ -0.3
CDCA3-212ENST00000604599 TRIM55Q9BYV6 548 aa13.16□□□□□ -0.3
CDCA3-212ENST00000604599 KCNQ5Q9NR82 932 aa13.16□□□□□ -0.3
CDCA3-212ENST00000604599 ANGPTL2Q9UKU9 493 aa13.16□□□□□ -0.3
CDCA3-212ENST00000604599 TISP43B9A030 160 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 PDLIM1O00151 329 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 PLSCR1O15162 318 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 LSAMPQ13449 338 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 MARK2Q7KZI7 788 aaKnown RBP13.15□□□□□ -0.3
CDCA3-212ENST00000604599 LCA5Q86VQ0 697 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 FAM178BQ8IXR5 827 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 PPM1KQ8N3J5 372 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 GLIS1Q8NBF1 620 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 FBXO27Q8NI29 283 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 WDR66Q8TBY9 1149 aa13.15□□□□□ -0.3
CDCA3-212ENST00000604599 ELMO3Q96BJ8 720 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms