RNA–Protein interactions for RNA: ENST00000603633.2

LINC00221-201, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,656 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-201ENST00000603633 MCCD1P59942 119 aaPredicted RBP16.93■□□□□ 0.3
LINC00221-201ENST00000603633 ERVFC1P60507 584 aa16.93■□□□□ 0.3
LINC00221-201ENST00000603633 CREMQ03060 361 aa16.93■□□□□ 0.3
LINC00221-201ENST00000603633 BFSP1Q12934 665 aa16.93■□□□□ 0.3
LINC00221-201ENST00000603633 FAM171A1Q5VUB5 890 aa16.93■□□□□ 0.3
LINC00221-201ENST00000603633 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.93■□□□□ 0.3
LINC00221-201ENST00000603633 MRPL43Q8N983 215 aaKnown RBP16.93■□□□□ 0.3
LINC00221-201ENST00000603633 C1orf127Q8N9H9 656 aa16.93■□□□□ 0.3
LINC00221-201ENST00000603633 CDCA3Q99618 268 aaPredicted RBP16.93■□□□□ 0.3
LINC00221-201ENST00000603633 GPR62Q9BZJ7 368 aa16.93■□□□□ 0.3
LINC00221-201ENST00000603633 MTMR12Q9C0I1 747 aa16.93■□□□□ 0.3
LINC00221-201ENST00000603633 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.93■□□□□ 0.3
LINC00221-201ENST00000603633 MYH11P35749 1972 aa16.93■□□□□ 0.3
LINC00221-201ENST00000603633 F8W810 466 aa16.92■□□□□ 0.3
LINC00221-201ENST00000603633 GLUD2P49448 558 aa16.92■□□□□ 0.3
LINC00221-201ENST00000603633 TAF6P49848 677 aa16.92■□□□□ 0.3
LINC00221-201ENST00000603633 GUCY2FP51841 1108 aa16.92■□□□□ 0.3
LINC00221-201ENST00000603633 LILRA4P59901 499 aa16.92■□□□□ 0.3
LINC00221-201ENST00000603633 DSG1Q02413 1049 aa16.92■□□□□ 0.3
LINC00221-201ENST00000603633 STX1AQ16623 288 aa16.92■□□□□ 0.3
LINC00221-201ENST00000603633 DPCR1Q3MIW9 517 aa16.92■□□□□ 0.3
LINC00221-201ENST00000603633 TRAPPC11Q7Z392 1133 aa16.92■□□□□ 0.3
LINC00221-201ENST00000603633 FRMD5Q7Z6J6 570 aa16.92■□□□□ 0.3
LINC00221-201ENST00000603633 C3orf58Q8NDZ4 430 aa16.92■□□□□ 0.3
LINC00221-201ENST00000603633 APPL2Q8NEU8 664 aa16.92■□□□□ 0.3
LINC00221-201ENST00000603633 HASPINQ8TF76 798 aa16.92■□□□□ 0.3
LINC00221-201ENST00000603633 SUSD3Q96L08 255 aa16.92■□□□□ 0.3
LINC00221-201ENST00000603633 DUSP9Q99956 384 aaKnown RBP16.92■□□□□ 0.3
LINC00221-201ENST00000603633 TTPALQ9BTX7 342 aa16.92■□□□□ 0.3
LINC00221-201ENST00000603633 EMILIN2Q9BXX0 1053 aa16.92■□□□□ 0.3
LINC00221-201ENST00000603633 ARMCX3Q9UH62 379 aaPredicted RBP16.92■□□□□ 0.3
LINC00221-201ENST00000603633 LRRIQ3A6PVS8 624 aaPredicted RBP16.91■□□□□ 0.3
LINC00221-201ENST00000603633 ITGB3P05106 788 aa16.91■□□□□ 0.3
LINC00221-201ENST00000603633 POLR2BP30876 1174 aaKnown RBP16.91■□□□□ 0.3
LINC00221-201ENST00000603633 GTF2H1P32780 548 aa16.91■□□□□ 0.3
LINC00221-201ENST00000603633 AARSP49588 968 aaKnown RBP eCLIP16.91■□□□□ 0.3
LINC00221-201ENST00000603633 STX17P56962 302 aa16.91■□□□□ 0.3
LINC00221-201ENST00000603633 MYO1EQ12965 1108 aa16.91■□□□□ 0.3
LINC00221-201ENST00000603633 TPD52L1Q16890 204 aaPredicted RBP16.91■□□□□ 0.3
LINC00221-201ENST00000603633 SV2CQ496J9 727 aa16.91■□□□□ 0.3
LINC00221-201ENST00000603633 PLPP4Q5VZY2 271 aa16.91■□□□□ 0.3
LINC00221-201ENST00000603633 OR5B17Q8NGF7 314 aa16.91■□□□□ 0.3
LINC00221-201ENST00000603633 POP1Q99575 1024 aaKnown RBP16.91■□□□□ 0.3
LINC00221-201ENST00000603633 VN1R3Q9BXE9 311 aa16.91■□□□□ 0.3
LINC00221-201ENST00000603633 AGAP1Q9UPQ3 857 aa16.91■□□□□ 0.3
LINC00221-201ENST00000603633 CHD9Q3L8U1 2897 aa16.91■□□□□ 0.3
LINC00221-201ENST00000603633 PHACTR2O75167 634 aa16.91■□□□□ 0.3
LINC00221-201ENST00000603633 KRT19P08727 400 aa16.91■□□□□ 0.3
LINC00221-201ENST00000603633 FGFR3P22607 806 aa16.91■□□□□ 0.3
LINC00221-201ENST00000603633 CA8P35219 290 aa16.91■□□□□ 0.3
LINC00221-201ENST00000603633 IRS1P35568 1242 aa16.91■□□□□ 0.3
LINC00221-201ENST00000603633 TRPC3Q13507 836 aa16.91■□□□□ 0.3
LINC00221-201ENST00000603633 KIAA0319Q5VV43 1072 aa16.91■□□□□ 0.3
LINC00221-201ENST00000603633 LMBRD2Q68DH5 695 aaPredicted RBP16.91■□□□□ 0.3
LINC00221-201ENST00000603633 CD300LGQ6UXG3 332 aa16.91■□□□□ 0.3
LINC00221-201ENST00000603633 DSTYKQ6XUX3 929 aa16.91■□□□□ 0.3
LINC00221-201ENST00000603633 EEF2KMTQ96G04 330 aa16.91■□□□□ 0.3
LINC00221-201ENST00000603633 BORCS6Q96GS4 357 aa16.91■□□□□ 0.3
LINC00221-201ENST00000603633 SRRTQ9BXP5 876 aaKnown RBP16.91■□□□□ 0.3
LINC00221-201ENST00000603633 OXCT2Q9BYC2 517 aaPredicted RBP16.91■□□□□ 0.3
LINC00221-201ENST00000603633 DSEQ9UL01 958 aa16.91■□□□□ 0.3
LINC00221-201ENST00000603633 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.9■□□□□ 0.3
LINC00221-201ENST00000603633 C2orf71A6NGG8 1288 aa16.9■□□□□ 0.3
LINC00221-201ENST00000603633 M0QZQ0 153 aa16.9■□□□□ 0.3
LINC00221-201ENST00000603633 CCDC192P0DO97 292 aa16.9■□□□□ 0.3
LINC00221-201ENST00000603633 BRCC3P46736 316 aa16.9■□□□□ 0.3
LINC00221-201ENST00000603633 PTPN14Q15678 1187 aa16.9■□□□□ 0.3
LINC00221-201ENST00000603633 CCDC40Q4G0X9 1142 aa16.9■□□□□ 0.3
LINC00221-201ENST00000603633 ANKS3Q6ZW76 656 aa16.9■□□□□ 0.3
LINC00221-201ENST00000603633 TAS1R1Q7RTX1 841 aa16.9■□□□□ 0.3
LINC00221-201ENST00000603633 PPFIBP1Q86W92 1011 aa16.9■□□□□ 0.3
LINC00221-201ENST00000603633 CEP57Q86XR8 500 aa16.9■□□□□ 0.3
LINC00221-201ENST00000603633 PIK3R5Q8WYR1 880 aa16.9■□□□□ 0.3
LINC00221-201ENST00000603633 NAT10Q9H0A0 1025 aaKnown RBP16.9■□□□□ 0.3
LINC00221-201ENST00000603633 GZF1Q9H116 711 aaPredicted RBP16.9■□□□□ 0.3
LINC00221-201ENST00000603633 TLE6Q9H808 572 aa16.9■□□□□ 0.3
LINC00221-201ENST00000603633 PCDHB8Q9UN66 801 aa16.9■□□□□ 0.3
LINC00221-201ENST00000603633 KPNA7A9QM74 516 aa16.89■□□□□ 0.29
LINC00221-201ENST00000603633 H7C4K7 107 aa16.89■□□□□ 0.29
LINC00221-201ENST00000603633 LILRB3O75022 631 aa16.89■□□□□ 0.29
LINC00221-201ENST00000603633 CSPG5O95196 566 aa16.89■□□□□ 0.29
LINC00221-201ENST00000603633 C4BPAP04003 597 aaKnown RBP16.89■□□□□ 0.29
LINC00221-201ENST00000603633 ODC1P11926 461 aa16.89■□□□□ 0.29
LINC00221-201ENST00000603633 ATICP31939 592 aa16.89■□□□□ 0.29
LINC00221-201ENST00000603633 BIRC3Q13489 604 aa16.89■□□□□ 0.29
LINC00221-201ENST00000603633 NFKBIBQ15653 356 aa16.89■□□□□ 0.29
LINC00221-201ENST00000603633 TCEAL5Q5H9L2 206 aa16.89■□□□□ 0.29
LINC00221-201ENST00000603633 MICALL1Q8N3F8 863 aa16.89■□□□□ 0.29
LINC00221-201ENST00000603633 CXorf38Q8TB03 319 aa16.89■□□□□ 0.29
LINC00221-201ENST00000603633 PLEKHO2Q8TD55 490 aa16.89■□□□□ 0.29
LINC00221-201ENST00000603633 RIN2Q8WYP3 895 aaPredicted RBP16.89■□□□□ 0.29
LINC00221-201ENST00000603633 ZNF516Q92618 1163 aa16.89■□□□□ 0.29
LINC00221-201ENST00000603633 RXFP1Q9HBX9 757 aa16.89■□□□□ 0.29
LINC00221-201ENST00000603633 FNIP2Q9P278 1114 aa16.89■□□□□ 0.29
LINC00221-201ENST00000603633 SIX4Q9UIU6 781 aa16.89■□□□□ 0.29
LINC00221-201ENST00000603633 PTPRJQ12913 1337 aa16.89■□□□□ 0.29
LINC00221-201ENST00000603633 SZT2Q5T011 3432 aa16.89■□□□□ 0.29
LINC00221-201ENST00000603633 FNDC1Q4ZHG4 1894 aaPredicted RBP16.88■□□□□ 0.29
LINC00221-201ENST00000603633 STAU1O95793 577 aaKnown RBP16.88■□□□□ 0.29
LINC00221-201ENST00000603633 C1RP00736 705 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms