RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 IGFBP6P24592 240 aaPredicted RBP19.46■□□□□ 0.71
SHKBP1-227ENST00000602011 ABCD1P33897 745 aa19.46■□□□□ 0.71
SHKBP1-227ENST00000602011 OSTNP61366 133 aa19.46■□□□□ 0.71
SHKBP1-227ENST00000602011 UBXN2BQ14CS0 331 aa19.46■□□□□ 0.71
SHKBP1-227ENST00000602011 ARL6IP4Q66PJ3 421 aaKnown RBP19.46■□□□□ 0.71
SHKBP1-227ENST00000602011 TAS1R3Q7RTX0 852 aa19.46■□□□□ 0.71
SHKBP1-227ENST00000602011 DGLUCYQ7Z3D6 616 aa19.46■□□□□ 0.71
SHKBP1-227ENST00000602011 E2F7Q96AV8 911 aa19.46■□□□□ 0.71
SHKBP1-227ENST00000602011 MCRS1Q96EZ8 462 aa19.46■□□□□ 0.71
SHKBP1-227ENST00000602011 ZMAT2Q96NC0 199 aaKnown RBP19.46■□□□□ 0.71
SHKBP1-227ENST00000602011 IER2Q9BTL4 223 aa19.46■□□□□ 0.71
SHKBP1-227ENST00000602011 FAM126AQ9BYI3 521 aaPredicted RBP19.46■□□□□ 0.71
SHKBP1-227ENST00000602011 ZFP14Q9HCL3 533 aa19.46■□□□□ 0.71
SHKBP1-227ENST00000602011 LTB4R2Q9NPC1 389 aa19.46■□□□□ 0.71
SHKBP1-227ENST00000602011 TRPV5Q9NQA5 729 aa19.46■□□□□ 0.71
SHKBP1-227ENST00000602011 SPATA6Q9NWH7 488 aaPredicted RBP19.46■□□□□ 0.71
SHKBP1-227ENST00000602011 FBXL5Q9UKA1 691 aa19.46■□□□□ 0.71
SHKBP1-227ENST00000602011 PCDHGA2Q9Y5H1 932 aa19.46■□□□□ 0.71
SHKBP1-227ENST00000602011 FANCMQ8IYD8 2048 aa19.46■□□□□ 0.71
SHKBP1-227ENST00000602011 WDR27A2RRH5 827 aa19.45■□□□□ 0.7
SHKBP1-227ENST00000602011 ABLIM1O14639 778 aa19.45■□□□□ 0.7
SHKBP1-227ENST00000602011 XPOTO43592 962 aaKnown RBP19.45■□□□□ 0.7
SHKBP1-227ENST00000602011 CLTAP09496 248 aa19.45■□□□□ 0.7
SHKBP1-227ENST00000602011 CYP3A5P20815 502 aa19.45■□□□□ 0.7
SHKBP1-227ENST00000602011 MCL1Q07820 350 aa19.45■□□□□ 0.7
SHKBP1-227ENST00000602011 MAPK7Q13164 816 aa19.45■□□□□ 0.7
SHKBP1-227ENST00000602011 NOLC1Q14978 699 aaKnown RBP eCLIP19.45■□□□□ 0.7
SHKBP1-227ENST00000602011 CTXN3Q4LDR2 81 aa19.45■□□□□ 0.7
SHKBP1-227ENST00000602011 MAMSTRQ6ZN01 415 aa19.45■□□□□ 0.7
SHKBP1-227ENST00000602011 PDZD4Q76G19 769 aaPredicted RBP19.45■□□□□ 0.7
SHKBP1-227ENST00000602011 TMEM161BQ8NDZ6 487 aa19.45■□□□□ 0.7
SHKBP1-227ENST00000602011 IRF7Q92985 503 aa19.45■□□□□ 0.7
SHKBP1-227ENST00000602011 KXD1Q9BQD3 176 aa19.45■□□□□ 0.7
SHKBP1-227ENST00000602011 RUSC1Q9BVN2 902 aa19.45■□□□□ 0.7
SHKBP1-227ENST00000602011 PCDHB8Q9UN66 801 aa19.45■□□□□ 0.7
SHKBP1-227ENST00000602011 I3L4J1 428 aa19.44■□□□□ 0.7
SHKBP1-227ENST00000602011 SLC16A4O15374 487 aa19.44■□□□□ 0.7
SHKBP1-227ENST00000602011 MCM4P33991 863 aa19.44■□□□□ 0.7
SHKBP1-227ENST00000602011 MLLT6P55198 1093 aaPredicted RBP19.44■□□□□ 0.7
SHKBP1-227ENST00000602011 ADCY1Q08828 1119 aa19.44■□□□□ 0.7
SHKBP1-227ENST00000602011 NBR1Q14596 966 aa19.44■□□□□ 0.7
SHKBP1-227ENST00000602011 SLC10A6Q3KNW5 377 aa19.44■□□□□ 0.7
SHKBP1-227ENST00000602011 PRSS36Q5K4E3 855 aa19.44■□□□□ 0.7
SHKBP1-227ENST00000602011 C1orf228Q6PIY5 440 aa19.44■□□□□ 0.7
SHKBP1-227ENST00000602011 SUMF1Q8NBK3 374 aa19.44■□□□□ 0.7
SHKBP1-227ENST00000602011 ATRIPQ8WXE1 791 aa19.44■□□□□ 0.7
SHKBP1-227ENST00000602011 ING5Q8WYH8 240 aa19.44■□□□□ 0.7
SHKBP1-227ENST00000602011 CDK5RAP3Q96JB5 506 aa19.44■□□□□ 0.7
SHKBP1-227ENST00000602011 AK8Q96MA6 479 aa19.44■□□□□ 0.7
SHKBP1-227ENST00000602011 CORO1BQ9BR76 489 aa19.44■□□□□ 0.7
SHKBP1-227ENST00000602011 MMTAG2Q9BU76 263 aaKnown RBP19.44■□□□□ 0.7
SHKBP1-227ENST00000602011 INSL5Q9Y5Q6 135 aa19.44■□□□□ 0.7
SHKBP1-227ENST00000602011 MIA3Q5JRA6 1907 aa19.43■□□□□ 0.7
SHKBP1-227ENST00000602011 OAZ2O95190 189 aa19.43■□□□□ 0.7
SHKBP1-227ENST00000602011 MAPTP10636 758 aaKnown RBP19.43■□□□□ 0.7
SHKBP1-227ENST00000602011 SDHBP21912 280 aa19.43■□□□□ 0.7
SHKBP1-227ENST00000602011 LRPAP1P30533 357 aa19.43■□□□□ 0.7
SHKBP1-227ENST00000602011 ARPP19P56211 112 aa19.43■□□□□ 0.7
SHKBP1-227ENST00000602011 ATP2C1P98194 919 aaPredicted RBP19.43■□□□□ 0.7
SHKBP1-227ENST00000602011 PLD1Q13393 1074 aa19.43■□□□□ 0.7
SHKBP1-227ENST00000602011 PPP2R5DQ14738 602 aa19.43■□□□□ 0.7
SHKBP1-227ENST00000602011 IL17AQ16552 155 aa19.43■□□□□ 0.7
SHKBP1-227ENST00000602011 CD302Q8IX05 232 aa19.43■□□□□ 0.7
SHKBP1-227ENST00000602011 DEPDC1BQ8WUY9 529 aa19.43■□□□□ 0.7
SHKBP1-227ENST00000602011 DDX12PQ92771 950 aa19.43■□□□□ 0.7
SHKBP1-227ENST00000602011 SECISBP2LQ93073 1101 aaKnown RBP19.43■□□□□ 0.7
SHKBP1-227ENST00000602011 TBC1D32Q96NH3 1257 aa19.43■□□□□ 0.7
SHKBP1-227ENST00000602011 TRMT61BQ9BVS5 477 aaKnown RBP19.43■□□□□ 0.7
SHKBP1-227ENST00000602011 VWA8A3KMH1 1905 aa19.43■□□□□ 0.7
SHKBP1-227ENST00000602011 SFI1A8K8P3 1242 aa19.42■□□□□ 0.7
SHKBP1-227ENST00000602011 M0QZQ0 153 aa19.42■□□□□ 0.7
SHKBP1-227ENST00000602011 EPHA5P54756 1037 aa19.42■□□□□ 0.7
SHKBP1-227ENST00000602011 YWHAHQ04917 246 aaPredicted RBP19.42■□□□□ 0.7
SHKBP1-227ENST00000602011 SLC5A9Q2M3M2 681 aa19.42■□□□□ 0.7
SHKBP1-227ENST00000602011 TANGO2Q6ICL3 276 aa19.42■□□□□ 0.7
SHKBP1-227ENST00000602011 TPRG1Q6ZUI0 275 aa19.42■□□□□ 0.7
SHKBP1-227ENST00000602011 SMARCD2Q92925 531 aa19.42■□□□□ 0.7
SHKBP1-227ENST00000602011 MSANTD3Q96H12 275 aa19.42■□□□□ 0.7
SHKBP1-227ENST00000602011 BRD9Q9H8M2 597 aa19.42■□□□□ 0.7
SHKBP1-227ENST00000602011 TRPV4Q9HBA0 871 aa19.42■□□□□ 0.7
SHKBP1-227ENST00000602011 ZSCAN32Q9NX65 697 aa19.42■□□□□ 0.7
SHKBP1-227ENST00000602011 ODF2LQ9ULJ1 636 aa19.42■□□□□ 0.7
SHKBP1-227ENST00000602011 UBQLN1Q9UMX0 589 aaKnown RBP19.42■□□□□ 0.7
SHKBP1-227ENST00000602011 NOTCH4Q99466 2003 aa19.42■□□□□ 0.7
SHKBP1-227ENST00000602011 OR6C75A6NL08 312 aa19.41■□□□□ 0.7
SHKBP1-227ENST00000602011 PP2D1A8MPX8 630 aa19.41■□□□□ 0.7
SHKBP1-227ENST00000602011 PLA2G4BP0C869 781 aa19.41■□□□□ 0.7
SHKBP1-227ENST00000602011 PSMC3P17980 439 aa19.41■□□□□ 0.7
SHKBP1-227ENST00000602011 CDC25AP30304 524 aa19.41■□□□□ 0.7
SHKBP1-227ENST00000602011 NRLP54845 237 aa19.41■□□□□ 0.7
SHKBP1-227ENST00000602011 SLC12A3P55017 1021 aa19.41■□□□□ 0.7
SHKBP1-227ENST00000602011 PUM1Q14671 1186 aaKnown RBP eCLIP19.41■□□□□ 0.7
SHKBP1-227ENST00000602011 RABEP1Q15276 862 aa19.41■□□□□ 0.7
SHKBP1-227ENST00000602011 ZBTB6Q15916 424 aa19.41■□□□□ 0.7
SHKBP1-227ENST00000602011 MCTP1Q6DN14 999 aa19.41■□□□□ 0.7
SHKBP1-227ENST00000602011 POTEHQ6S545 545 aa19.41■□□□□ 0.7
SHKBP1-227ENST00000602011 USP37Q86T82 979 aa19.41■□□□□ 0.7
SHKBP1-227ENST00000602011 ZBTB44Q8NCP5 570 aa19.41■□□□□ 0.7
SHKBP1-227ENST00000602011 BEST2Q8NFU1 509 aa19.41■□□□□ 0.7
SHKBP1-227ENST00000602011 NELL1Q92832 810 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms