RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 WDR72Q3MJ13 1102 aa11.71□□□□□ -0.53
ZNF558-207ENST00000601372 BTBD8Q5XKL5 378 aa11.71□□□□□ -0.53
ZNF558-207ENST00000601372 TTI2Q6NXR4 508 aa11.71□□□□□ -0.53
ZNF558-207ENST00000601372 SDCCAG8Q86SQ7 713 aaPredicted RBP11.71□□□□□ -0.53
ZNF558-207ENST00000601372 SRLQ86TD4 932 aa11.71□□□□□ -0.53
ZNF558-207ENST00000601372 CPA5Q8WXQ8 436 aa11.71□□□□□ -0.53
ZNF558-207ENST00000601372 CFAP57Q96MR6 1250 aa11.71□□□□□ -0.53
ZNF558-207ENST00000601372 STRIP2Q9ULQ0 834 aa11.71□□□□□ -0.53
ZNF558-207ENST00000601372 ACCSLQ4AC99 568 aa11.71□□□□□ -0.53
ZNF558-207ENST00000601372 Q4G0T1 1027 aa11.71□□□□□ -0.53
ZNF558-207ENST00000601372 SYCP2LQ5T4T6 812 aa11.71□□□□□ -0.53
ZNF558-207ENST00000601372 TMEM199Q8N511 208 aa11.71□□□□□ -0.53
ZNF558-207ENST00000601372 HASPINQ8TF76 798 aa11.71□□□□□ -0.53
ZNF558-207ENST00000601372 ADAM22Q9P0K1 906 aa11.71□□□□□ -0.53
ZNF558-207ENST00000601372 CASZ1Q86V15 1759 aa11.71□□□□□ -0.53
ZNF558-207ENST00000601372 PODXLO00592 558 aa11.71□□□□□ -0.53
ZNF558-207ENST00000601372 SASH3O75995 380 aa11.71□□□□□ -0.53
ZNF558-207ENST00000601372 HMGCRP04035 888 aa11.71□□□□□ -0.53
ZNF558-207ENST00000601372 CSDE1O75534 798 aaKnown RBP11.71□□□□□ -0.54
ZNF558-207ENST00000601372 SMAD1Q15797 465 aaKnown RBP11.71□□□□□ -0.54
ZNF558-207ENST00000601372 SEZ6Q53EL9 994 aa11.71□□□□□ -0.54
ZNF558-207ENST00000601372 RFFLQ8WZ73 363 aa11.71□□□□□ -0.54
ZNF558-207ENST00000601372 KLHL29Q96CT2 875 aa11.71□□□□□ -0.54
ZNF558-207ENST00000601372 POLR3CQ9BUI4 534 aaPredicted RBP11.71□□□□□ -0.54
ZNF558-207ENST00000601372 IGFLR1Q9H665 355 aa11.71□□□□□ -0.54
ZNF558-207ENST00000601372 ZNF446Q9NWS9 450 aa11.71□□□□□ -0.54
ZNF558-207ENST00000601372 RGS17Q9UGC6 210 aaPredicted RBP11.71□□□□□ -0.54
ZNF558-207ENST00000601372 FMO5P49326 533 aa11.71□□□□□ -0.54
ZNF558-207ENST00000601372 EPHB1P54762 984 aa11.71□□□□□ -0.54
ZNF558-207ENST00000601372 ACTN3Q08043 901 aaPredicted RBP11.71□□□□□ -0.54
ZNF558-207ENST00000601372 FBXW10Q5XX13 1052 aa11.71□□□□□ -0.54
ZNF558-207ENST00000601372 COPS5Q92905 334 aa11.71□□□□□ -0.54
ZNF558-207ENST00000601372 MCF2LO15068 1137 aa11.7□□□□□ -0.54
ZNF558-207ENST00000601372 HSPA6P17066 643 aa11.7□□□□□ -0.54
ZNF558-207ENST00000601372 RECQLP46063 649 aaPredicted RBP11.7□□□□□ -0.54
ZNF558-207ENST00000601372 SLC26A2P50443 739 aa11.7□□□□□ -0.54
ZNF558-207ENST00000601372 IRX4P78413 519 aa11.7□□□□□ -0.54
ZNF558-207ENST00000601372 IL17AQ16552 155 aa11.7□□□□□ -0.54
ZNF558-207ENST00000601372 BBS9Q3SYG4 887 aa11.7□□□□□ -0.54
ZNF558-207ENST00000601372 NT5DC1Q5TFE4 455 aa11.7□□□□□ -0.54
ZNF558-207ENST00000601372 NOP9Q86U38 636 aaKnown RBP11.7□□□□□ -0.54
ZNF558-207ENST00000601372 SLC51AQ86UW1 340 aa11.7□□□□□ -0.54
ZNF558-207ENST00000601372 TARS2Q9BW92 718 aaKnown RBP11.7□□□□□ -0.54
ZNF558-207ENST00000601372 DBR1Q9UK59 544 aaKnown RBP11.7□□□□□ -0.54
ZNF558-207ENST00000601372 PSMD6Q15008 389 aa11.7□□□□□ -0.54
ZNF558-207ENST00000601372 SRRM1Q8IYB3 904 aaKnown RBP11.7□□□□□ -0.54
ZNF558-207ENST00000601372 CASKIN2Q8WXE0 1202 aa11.7□□□□□ -0.54
ZNF558-207ENST00000601372 HVCN1Q96D96 273 aa11.7□□□□□ -0.54
ZNF558-207ENST00000601372 BTBD6Q96KE9 485 aa11.7□□□□□ -0.54
ZNF558-207ENST00000601372 SCYL1Q96KG9 808 aa11.7□□□□□ -0.54
ZNF558-207ENST00000601372 LACRTQ9GZZ8 138 aa11.7□□□□□ -0.54
ZNF558-207ENST00000601372 SLC12A2P55011 1212 aa11.7□□□□□ -0.54
ZNF558-207ENST00000601372 INTS13Q9NVM9 706 aa11.7□□□□□ -0.54
ZNF558-207ENST00000601372 CYP39A1Q9NYL5 469 aa11.7□□□□□ -0.54
ZNF558-207ENST00000601372 APEX2Q9UBZ4 518 aa11.7□□□□□ -0.54
ZNF558-207ENST00000601372 MSRAQ9UJ68 235 aa11.7□□□□□ -0.54
ZNF558-207ENST00000601372 SLC16A3O15427 465 aaKnown RBP11.7□□□□□ -0.54
ZNF558-207ENST00000601372 SLC26A4O43511 780 aa11.7□□□□□ -0.54
ZNF558-207ENST00000601372 KRT10P13645 584 aa11.7□□□□□ -0.54
ZNF558-207ENST00000601372 NNMTP40261 264 aa11.7□□□□□ -0.54
ZNF558-207ENST00000601372 CCL23P55773 120 aa11.7□□□□□ -0.54
ZNF558-207ENST00000601372 NECAB2Q7Z6G3 386 aa11.7□□□□□ -0.54
ZNF558-207ENST00000601372 ZNF473Q8WTR7 871 aaKnown RBP11.7□□□□□ -0.54
ZNF558-207ENST00000601372 A0A087WZ62 844 aa11.7□□□□□ -0.54
ZNF558-207ENST00000601372 RPLP2P05387 115 aaKnown RBP11.7□□□□□ -0.54
ZNF558-207ENST00000601372 KCTD19Q17RG1 926 aaPredicted RBP11.7□□□□□ -0.54
ZNF558-207ENST00000601372 KIAA0895Q8NCT3 520 aa11.7□□□□□ -0.54
ZNF558-207ENST00000601372 TRAPPC12Q8WVT3 735 aa11.7□□□□□ -0.54
ZNF558-207ENST00000601372 FDXACB1Q9BRP7 624 aaPredicted RBP11.7□□□□□ -0.54
ZNF558-207ENST00000601372 MOSPD1Q9UJG1 213 aa11.7□□□□□ -0.54
ZNF558-207ENST00000601372 SNRNP35Q16560 246 aaKnown RBP11.7□□□□□ -0.54
ZNF558-207ENST00000601372 LRRC31Q6UY01 552 aa11.7□□□□□ -0.54
ZNF558-207ENST00000601372 MTMR14Q8NCE2 650 aa11.7□□□□□ -0.54
ZNF558-207ENST00000601372 PPP4R1Q8TF05 950 aa11.7□□□□□ -0.54
ZNF558-207ENST00000601372 ARFGEF2Q9Y6D5 1785 aa11.7□□□□□ -0.54
ZNF558-207ENST00000601372 EIF4E1BA6NMX2 242 aaKnown RBP11.69□□□□□ -0.54
ZNF558-207ENST00000601372 WNT7AO00755 349 aa11.69□□□□□ -0.54
ZNF558-207ENST00000601372 KIAA0391O15091 583 aaKnown RBP11.69□□□□□ -0.54
ZNF558-207ENST00000601372 CREB3O43889 395 aa11.69□□□□□ -0.54
ZNF558-207ENST00000601372 HMBSP08397 361 aa11.69□□□□□ -0.54
ZNF558-207ENST00000601372 TSTA3Q13630 321 aaPredicted RBP11.69□□□□□ -0.54
ZNF558-207ENST00000601372 AMHR2Q16671 573 aa11.69□□□□□ -0.54
ZNF558-207ENST00000601372 KLHDC7AQ5VTJ3 777 aa11.69□□□□□ -0.54
ZNF558-207ENST00000601372 ZNF512Q96ME7 567 aaPredicted RBP11.69□□□□□ -0.54
ZNF558-207ENST00000601372 VIPAS39Q9H9C1 493 aa11.69□□□□□ -0.54
ZNF558-207ENST00000601372 BTAF1O14981 1849 aa11.69□□□□□ -0.54
ZNF558-207ENST00000601372 RASA4BC9J798 803 aa11.69□□□□□ -0.54
ZNF558-207ENST00000601372 RASA4O43374 803 aa11.69□□□□□ -0.54
ZNF558-207ENST00000601372 LONRF1Q17RB8 773 aa11.69□□□□□ -0.54
ZNF558-207ENST00000601372 ERGIC2Q96RQ1 377 aa11.69□□□□□ -0.54
ZNF558-207ENST00000601372 ACTR5Q9H9F9 607 aaPredicted RBP11.69□□□□□ -0.54
ZNF558-207ENST00000601372 STRCP1A6NGW2 1772 aa11.69□□□□□ -0.54
ZNF558-207ENST00000601372 EIF3HO15372 352 aaKnown RBP eCLIP11.69□□□□□ -0.54
ZNF558-207ENST00000601372 EPM2AIP1Q7L775 607 aaPredicted RBP11.69□□□□□ -0.54
ZNF558-207ENST00000601372 ARHGAP24Q8N264 748 aa11.69□□□□□ -0.54
ZNF558-207ENST00000601372 ATP2A3Q93084 1043 aa11.69□□□□□ -0.54
ZNF558-207ENST00000601372 KBTBD4Q9NVX7 518 aa11.69□□□□□ -0.54
ZNF558-207ENST00000601372 AFG3L2Q9Y4W6 797 aa11.69□□□□□ -0.54
ZNF558-207ENST00000601372 TCHHQ07283 1943 aa11.69□□□□□ -0.54
ZNF558-207ENST00000601372 PHF20L1A8MW92 1017 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms