RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 PDXDC1Q6P996 788 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 CYP26C1Q6V0L0 522 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 KRBA2Q6ZNG9 492 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 C15orf39Q6ZRI6 1047 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 RTL10Q7L3V2 364 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 LIMS2Q7Z4I7 341 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 ELOA2Q8IYF1 753 aaPredicted RBP9.55□□□□□ -0.88
SSBP4-208ENST00000600628 KIAA0895Q8NCT3 520 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 BEST2Q8NFU1 509 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 HASPINQ8TF76 798 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 KHSRPQ92945 711 aaKnown RBP eCLIP9.55□□□□□ -0.88
SSBP4-208ENST00000600628 ZNF707Q96C28 371 aaPredicted RBP9.55□□□□□ -0.88
SSBP4-208ENST00000600628 POP1Q99575 1024 aaKnown RBP9.55□□□□□ -0.88
SSBP4-208ENST00000600628 EMILIN2Q9BXX0 1053 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 BLZF1Q9H2G9 400 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 KCTD10Q9H3F6 313 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 PLEKHA4Q9H4M7 779 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 EPHX3Q9H6B9 360 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 RPF1Q9H9Y2 349 aaKnown RBP9.55□□□□□ -0.88
SSBP4-208ENST00000600628 GDPD2Q9HCC8 539 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 CGNQ9P2M7 1197 aaKnown RBP9.55□□□□□ -0.88
SSBP4-208ENST00000600628 FBXW11Q9UKB1 542 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 EXOC7Q9UPT5 735 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 TECTAO75443 2155 aa9.55□□□□□ -0.88
SSBP4-208ENST00000600628 PPEF2O14830 753 aa9.54□□□□□ -0.88
SSBP4-208ENST00000600628 SPTLC1O15269 473 aa9.54□□□□□ -0.88
SSBP4-208ENST00000600628 TRAPPC3O43617 180 aa9.54□□□□□ -0.88
SSBP4-208ENST00000600628 EXTL3O43909 919 aa9.54□□□□□ -0.88
SSBP4-208ENST00000600628 ZNF202O95125 648 aa9.54□□□□□ -0.88
SSBP4-208ENST00000600628 OAZ2O95190 189 aa9.54□□□□□ -0.88
SSBP4-208ENST00000600628 IL18RAPO95256 599 aa9.54□□□□□ -0.88
SSBP4-208ENST00000600628 LDHAP00338 332 aaKnown RBP9.54□□□□□ -0.88
SSBP4-208ENST00000600628 CYP11A1P05108 521 aa9.54□□□□□ -0.88
SSBP4-208ENST00000600628 HARSP12081 509 aaKnown RBP9.54□□□□□ -0.88
SSBP4-208ENST00000600628 TKTP29401 623 aaKnown RBP9.54□□□□□ -0.88
SSBP4-208ENST00000600628 AFMP43652 599 aa9.54□□□□□ -0.88
SSBP4-208ENST00000600628 BRCC3P46736 316 aa9.54□□□□□ -0.88
SSBP4-208ENST00000600628 LILRA4P59901 499 aa9.54□□□□□ -0.88
SSBP4-208ENST00000600628 CLDN10P78369 228 aa9.54□□□□□ -0.88
SSBP4-208ENST00000600628 PPP2R3AQ06190 1150 aa9.54□□□□□ -0.88
SSBP4-208ENST00000600628 KCNB1Q14721 858 aa9.54□□□□□ -0.88
SSBP4-208ENST00000600628 PSMD5Q16401 504 aa9.54□□□□□ -0.88
SSBP4-208ENST00000600628 NFIL3Q16649 462 aa9.54□□□□□ -0.88
SSBP4-208ENST00000600628 TPRNQ4KMQ1 711 aa9.54□□□□□ -0.88
SSBP4-208ENST00000600628 KIAA1841Q6NSI8 718 aa9.54□□□□□ -0.88
SSBP4-208ENST00000600628 PRSS55Q6UWB4 352 aaPredicted RBP9.54□□□□□ -0.88
SSBP4-208ENST00000600628 GPR149Q86SP6 731 aa9.54□□□□□ -0.88
SSBP4-208ENST00000600628 SLC9A9Q8IVB4 645 aa9.54□□□□□ -0.88
SSBP4-208ENST00000600628 FSIP1Q8NA03 581 aa9.54□□□□□ -0.88
SSBP4-208ENST00000600628 RIN2Q8WYP3 895 aaPredicted RBP9.54□□□□□ -0.88
SSBP4-208ENST00000600628 POMGNT1Q8WZA1 660 aa9.54□□□□□ -0.88
SSBP4-208ENST00000600628 PHF7Q9BWX1 381 aaPredicted RBP9.54□□□□□ -0.88
SSBP4-208ENST00000600628 C1QTNF1Q9BXJ1 281 aa9.54□□□□□ -0.88
SSBP4-208ENST00000600628 AGPAT3Q9NRZ7 376 aa9.54□□□□□ -0.88
SSBP4-208ENST00000600628 CDH22Q9UJ99 828 aa9.54□□□□□ -0.88
SSBP4-208ENST00000600628 ZNF318Q5VUA4 2279 aa9.53□□□□□ -0.88
SSBP4-208ENST00000600628 I3L4J1 428 aa9.53□□□□□ -0.88
SSBP4-208ENST00000600628 C2CD2LO14523 706 aa9.53□□□□□ -0.88
SSBP4-208ENST00000600628 VNN2O95498 520 aa9.53□□□□□ -0.88
SSBP4-208ENST00000600628 GLUD1P00367 558 aa9.53□□□□□ -0.88
SSBP4-208ENST00000600628 PRR29P0C7W0 189 aa9.53□□□□□ -0.88
SSBP4-208ENST00000600628 RPL17P18621 184 aaKnown RBP9.53□□□□□ -0.88
SSBP4-208ENST00000600628 TYMPP19971 482 aa9.53□□□□□ -0.88
SSBP4-208ENST00000600628 KLRC2P26717 231 aa9.53□□□□□ -0.88
SSBP4-208ENST00000600628 HOXA9P31269 272 aa9.53□□□□□ -0.88
SSBP4-208ENST00000600628 GUCY2FP51841 1108 aa9.53□□□□□ -0.88
SSBP4-208ENST00000600628 SPAG1Q07617 926 aa9.53□□□□□ -0.88
SSBP4-208ENST00000600628 TMEM132DQ14C87 1099 aa9.53□□□□□ -0.88
SSBP4-208ENST00000600628 KNOP1Q1ED39 458 aaKnown RBP9.53□□□□□ -0.88
SSBP4-208ENST00000600628 KMT5BQ4FZB7 885 aa9.53□□□□□ -0.88
SSBP4-208ENST00000600628 COBLL1Q53SF7 1204 aa9.53□□□□□ -0.88
SSBP4-208ENST00000600628 C9orf57Q5W0N0 161 aa9.53□□□□□ -0.88
SSBP4-208ENST00000600628 SCARA3Q6AZY7 606 aa9.53□□□□□ -0.88
SSBP4-208ENST00000600628 CES5AQ6NT32 575 aa9.53□□□□□ -0.88
SSBP4-208ENST00000600628 CLEC17AQ6ZS10 378 aa9.53□□□□□ -0.88
SSBP4-208ENST00000600628 ANKS3Q6ZW76 656 aa9.53□□□□□ -0.88
SSBP4-208ENST00000600628 STXBP4Q6ZWJ1 553 aa9.53□□□□□ -0.88
SSBP4-208ENST00000600628 CEP57L1Q8IYX8 460 aa9.53□□□□□ -0.88
SSBP4-208ENST00000600628 GPD1LQ8N335 351 aa9.53□□□□□ -0.88
SSBP4-208ENST00000600628 C12orf76Q8N812 135 aaPredicted RBP9.53□□□□□ -0.88
SSBP4-208ENST00000600628 KIF12Q96FN5 646 aa9.53□□□□□ -0.88
SSBP4-208ENST00000600628 MFSD14AQ96MC6 490 aa9.53□□□□□ -0.88
SSBP4-208ENST00000600628 TIGD1Q96MW7 591 aa9.53□□□□□ -0.88
SSBP4-208ENST00000600628 NECTIN4Q96NY8 510 aa9.53□□□□□ -0.88
SSBP4-208ENST00000600628 APOL5Q9BWW9 433 aa9.53□□□□□ -0.88
SSBP4-208ENST00000600628 SFXN1Q9H9B4 322 aa9.53□□□□□ -0.88
SSBP4-208ENST00000600628 SLC39A2Q9NP94 309 aa9.53□□□□□ -0.88
SSBP4-208ENST00000600628 MAN1C1Q9NR34 630 aa9.53□□□□□ -0.88
SSBP4-208ENST00000600628 ZDHHC7Q9NXF8 308 aa9.53□□□□□ -0.88
SSBP4-208ENST00000600628 HSPBP1Q9NZL4 362 aa9.53□□□□□ -0.88
SSBP4-208ENST00000600628 SIX4Q9UIU6 781 aa9.53□□□□□ -0.88
SSBP4-208ENST00000600628 PCDHB8Q9UN66 801 aa9.53□□□□□ -0.88
SSBP4-208ENST00000600628 USTQ9Y2C2 406 aa9.53□□□□□ -0.88
SSBP4-208ENST00000600628 PTPRJQ12913 1337 aa9.53□□□□□ -0.88
SSBP4-208ENST00000600628 VPS13AQ96RL7 3174 aa9.52□□□□□ -0.89
SSBP4-208ENST00000600628 ARHGEF37A1IGU5 675 aa9.52□□□□□ -0.89
SSBP4-208ENST00000600628 WDR27A2RRH5 827 aa9.52□□□□□ -0.89
SSBP4-208ENST00000600628 PDXKO00764 312 aa9.52□□□□□ -0.89
SSBP4-208ENST00000600628 XPOTO43592 962 aaKnown RBP9.52□□□□□ -0.89
SSBP4-208ENST00000600628 ZMYND10O75800 440 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms