RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 RPS6KA5O75582 802 aa16.3■□□□□ 0.2
VRK3-218ENST00000600031 TMEM191BP0C7N4 346 aa16.3■□□□□ 0.2
VRK3-218ENST00000600031 FERP16591 822 aa16.3■□□□□ 0.2
VRK3-218ENST00000600031 MFAP3P55082 362 aa16.3■□□□□ 0.2
VRK3-218ENST00000600031 CYP27A1Q02318 531 aa16.3■□□□□ 0.2
VRK3-218ENST00000600031 PTK2Q05397 1052 aa16.3■□□□□ 0.2
VRK3-218ENST00000600031 ZNF571Q7Z3V5 609 aaPredicted RBP16.3■□□□□ 0.2
VRK3-218ENST00000600031 TRIM6Q9C030 488 aaPredicted RBP16.3■□□□□ 0.2
VRK3-218ENST00000600031 NXF3Q9H4D5 531 aaKnown RBP16.3■□□□□ 0.2
VRK3-218ENST00000600031 ASB7Q9H672 318 aa16.3■□□□□ 0.2
VRK3-218ENST00000600031 AGO3Q9H9G7 860 aaKnown RBP16.3■□□□□ 0.2
VRK3-218ENST00000600031 DNM1LO00429 736 aa16.3■□□□□ 0.2
VRK3-218ENST00000600031 AKR1B10O60218 316 aa16.3■□□□□ 0.2
VRK3-218ENST00000600031 ABL1P00519 1130 aa16.3■□□□□ 0.2
VRK3-218ENST00000600031 NFX1Q12986 1120 aaKnown RBP16.3■□□□□ 0.2
VRK3-218ENST00000600031 WDR44Q5JSH3 913 aa16.3■□□□□ 0.2
VRK3-218ENST00000600031 ANKRD36BP1Q96IX9 119 aa16.3■□□□□ 0.2
VRK3-218ENST00000600031 C1orf112Q9NSG2 853 aa16.3■□□□□ 0.2
VRK3-218ENST00000600031 PSD3Q9NYI0 1048 aa16.3■□□□□ 0.2
VRK3-218ENST00000600031 L1RE1Q9UN81 338 aa16.3■□□□□ 0.2
VRK3-218ENST00000600031 TRIP11Q15643 1979 aa16.29■□□□□ 0.2
VRK3-218ENST00000600031 ARVCFO00192 962 aa16.29■□□□□ 0.2
VRK3-218ENST00000600031 TNNC2P02585 160 aa16.29■□□□□ 0.2
VRK3-218ENST00000600031 MYL6P60660 151 aa16.29■□□□□ 0.2
VRK3-218ENST00000600031 GFPT1Q06210 699 aaPredicted RBP16.29■□□□□ 0.2
VRK3-218ENST00000600031 SHC3Q92529 594 aa16.29■□□□□ 0.2
VRK3-218ENST00000600031 PNKPQ96T60 521 aa16.29■□□□□ 0.2
VRK3-218ENST00000600031 GUCA1BQ9UMX6 200 aa16.29■□□□□ 0.2
VRK3-218ENST00000600031 TFR2Q9UP52 801 aa16.29■□□□□ 0.2
VRK3-218ENST00000600031 NUB1Q9Y5A7 615 aa16.29■□□□□ 0.2
VRK3-218ENST00000600031 BZW2Q9Y6E2 419 aaKnown RBP16.29■□□□□ 0.2
VRK3-218ENST00000600031 LCA5LO95447 670 aa16.28■□□□□ 0.2
VRK3-218ENST00000600031 GCNT1Q02742 428 aa16.28■□□□□ 0.2
VRK3-218ENST00000600031 ZNF618Q5T7W0 954 aa16.28■□□□□ 0.2
VRK3-218ENST00000600031 C1orf127Q8N9H9 656 aa16.28■□□□□ 0.2
VRK3-218ENST00000600031 APOL6Q9BWW8 343 aa16.28■□□□□ 0.2
VRK3-218ENST00000600031 OGDHLQ9ULD0 1010 aa16.28■□□□□ 0.2
VRK3-218ENST00000600031 UMODL1Q5DID0 1318 aa16.28■□□□□ 0.2
VRK3-218ENST00000600031 RECQL4O94761 1208 aa16.28■□□□□ 0.2
VRK3-218ENST00000600031 ASS1P00966 412 aaKnown RBP16.28■□□□□ 0.2
VRK3-218ENST00000600031 GHRP10912 638 aa16.28■□□□□ 0.2
VRK3-218ENST00000600031 AKAP5P24588 427 aa16.28■□□□□ 0.2
VRK3-218ENST00000600031 NOP14P78316 857 aaKnown RBP16.28■□□□□ 0.2
VRK3-218ENST00000600031 TMEM132DQ14C87 1099 aa16.28■□□□□ 0.2
VRK3-218ENST00000600031 FAM26DQ5JW98 314 aa16.28■□□□□ 0.2
VRK3-218ENST00000600031 FBXO47Q5MNV8 452 aa16.28■□□□□ 0.2
VRK3-218ENST00000600031 TWF2Q6IBS0 349 aaKnown RBP16.28■□□□□ 0.2
VRK3-218ENST00000600031 WDR93Q6P2C0 686 aa16.28■□□□□ 0.2
VRK3-218ENST00000600031 FAM71AQ8IYT1 594 aa16.28■□□□□ 0.2
VRK3-218ENST00000600031 EXOC4Q96A65 974 aa16.28■□□□□ 0.2
VRK3-218ENST00000600031 SNX27Q96L92 541 aa16.28■□□□□ 0.2
VRK3-218ENST00000600031 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.28■□□□□ 0.2
VRK3-218ENST00000600031 RNF39Q9H2S5 420 aa16.28■□□□□ 0.2
VRK3-218ENST00000600031 ADAMTS1Q9UHI8 967 aa16.28■□□□□ 0.2
VRK3-218ENST00000600031 SIX4Q9UIU6 781 aa16.28■□□□□ 0.2
VRK3-218ENST00000600031 A0A087X0T9 212 aa16.27■□□□□ 0.2
VRK3-218ENST00000600031 KRT86O43790 486 aa16.27■□□□□ 0.2
VRK3-218ENST00000600031 FAM228BP0C875 321 aa16.27■□□□□ 0.2
VRK3-218ENST00000600031 MCM3P25205 808 aa16.27■□□□□ 0.2
VRK3-218ENST00000600031 USP8P40818 1118 aa16.27■□□□□ 0.2
VRK3-218ENST00000600031 CDK7P50613 346 aa16.27■□□□□ 0.2
VRK3-218ENST00000600031 TRPC3Q13507 836 aa16.27■□□□□ 0.2
VRK3-218ENST00000600031 SMG8Q8ND04 991 aaKnown RBP16.27■□□□□ 0.2
VRK3-218ENST00000600031 CXorf38Q8TB03 319 aa16.27■□□□□ 0.2
VRK3-218ENST00000600031 RPGRIP1Q96KN7 1286 aa16.27■□□□□ 0.2
VRK3-218ENST00000600031 ZMAT2Q96NC0 199 aaKnown RBP16.27■□□□□ 0.2
VRK3-218ENST00000600031 PLEKHA5Q9HAU0 1116 aa16.27■□□□□ 0.2
VRK3-218ENST00000600031 ERVK-5Q9HDB9 667 aa16.27■□□□□ 0.2
VRK3-218ENST00000600031 ABCB6Q9NP58 842 aa16.27■□□□□ 0.2
VRK3-218ENST00000600031 IPPQ9Y573 584 aa16.27■□□□□ 0.2
VRK3-218ENST00000600031 RCCD1A6NED2 376 aa16.27■□□□□ 0.19
VRK3-218ENST00000600031 GPR182O15218 404 aa16.27■□□□□ 0.19
VRK3-218ENST00000600031 IPO7O95373 1038 aaKnown RBP16.27■□□□□ 0.19
VRK3-218ENST00000600031 RHOXF2BP0C7M4 288 aa16.27■□□□□ 0.19
VRK3-218ENST00000600031 HSPA8P11142 646 aaKnown RBP16.27■□□□□ 0.19
VRK3-218ENST00000600031 CKBP12277 381 aa16.27■□□□□ 0.19
VRK3-218ENST00000600031 CD52P31358 61 aa16.27■□□□□ 0.19
VRK3-218ENST00000600031 GUCY2FP51841 1108 aa16.27■□□□□ 0.19
VRK3-218ENST00000600031 YARSP54577 528 aaKnown RBP16.27■□□□□ 0.19
VRK3-218ENST00000600031 LPIN1Q14693 890 aa16.27■□□□□ 0.19
VRK3-218ENST00000600031 SPA17Q15506 151 aa16.27■□□□□ 0.19
VRK3-218ENST00000600031 SLC18A3Q16572 532 aa16.27■□□□□ 0.19
VRK3-218ENST00000600031 CCDC122Q5T0U0 273 aa16.27■□□□□ 0.19
VRK3-218ENST00000600031 PAPD7Q5XG87 772 aaKnown RBP16.27■□□□□ 0.19
VRK3-218ENST00000600031 ALKAL1Q6UXT8 129 aa16.27■□□□□ 0.19
VRK3-218ENST00000600031 ENOSF1Q7L5Y1 443 aa16.27■□□□□ 0.19
VRK3-218ENST00000600031 FMNL3Q8IVF7 1028 aa16.27■□□□□ 0.19
VRK3-218ENST00000600031 CD302Q8IX05 232 aa16.27■□□□□ 0.19
VRK3-218ENST00000600031 OLIG1Q8TAK6 271 aa16.27■□□□□ 0.19
VRK3-218ENST00000600031 KIF12Q96FN5 646 aa16.27■□□□□ 0.19
VRK3-218ENST00000600031 RHOXF2Q9BQY4 288 aa16.27■□□□□ 0.19
VRK3-218ENST00000600031 XYLT2Q9H1B5 865 aa16.27■□□□□ 0.19
VRK3-218ENST00000600031 RNF19AQ9NV58 838 aa16.27■□□□□ 0.19
VRK3-218ENST00000600031 PADI3Q9ULW8 664 aa16.27■□□□□ 0.19
VRK3-218ENST00000600031 C2CD2Q9Y426 696 aa16.27■□□□□ 0.19
VRK3-218ENST00000600031 PCDHA13Q9Y5I0 950 aa16.27■□□□□ 0.19
VRK3-218ENST00000600031 CYP26A1O43174 497 aa16.26■□□□□ 0.19
VRK3-218ENST00000600031 CLSTN1O94985 981 aa16.26■□□□□ 0.19
VRK3-218ENST00000600031 ITGB3P05106 788 aa16.26■□□□□ 0.19
VRK3-218ENST00000600031 KRT19P08727 400 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms