RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 LRG1P02750 347 aa16.03■□□□□ 0.16
IRF3-223ENST00000599223 PLS3P13797 630 aa16.03■□□□□ 0.16
IRF3-223ENST00000599223 MCM4P33991 863 aa16.03■□□□□ 0.16
IRF3-223ENST00000599223 PRKCQQ04759 706 aa16.03■□□□□ 0.16
IRF3-223ENST00000599223 CTXN3Q4LDR2 81 aa16.03■□□□□ 0.16
IRF3-223ENST00000599223 TMEM119Q4V9L6 283 aa16.03■□□□□ 0.16
IRF3-223ENST00000599223 ZBTB41Q5SVQ8 909 aa16.03■□□□□ 0.16
IRF3-223ENST00000599223 TPRG1Q6ZUI0 275 aa16.03■□□□□ 0.16
IRF3-223ENST00000599223 TCEAL8Q8IYN2 117 aa16.03■□□□□ 0.16
IRF3-223ENST00000599223 KCNG4Q8TDN1 519 aa16.03■□□□□ 0.16
IRF3-223ENST00000599223 SPIRE2Q8WWL2 714 aa16.03■□□□□ 0.16
IRF3-223ENST00000599223 SHDQ96IW2 340 aa16.03■□□□□ 0.16
IRF3-223ENST00000599223 TBC1D32Q96NH3 1257 aa16.03■□□□□ 0.16
IRF3-223ENST00000599223 NTPCRQ9BSD7 190 aaKnown RBP16.03■□□□□ 0.16
IRF3-223ENST00000599223 C17orf75Q9HAS0 396 aa16.03■□□□□ 0.16
IRF3-223ENST00000599223 GDE1Q9NZC3 331 aa16.03■□□□□ 0.16
IRF3-223ENST00000599223 NUB1Q9Y5A7 615 aa16.03■□□□□ 0.16
IRF3-223ENST00000599223 VWA3AA6NCI4 1184 aa16.02■□□□□ 0.16
IRF3-223ENST00000599223 MOSPD3O75425 235 aa16.02■□□□□ 0.16
IRF3-223ENST00000599223 RPL9P32969 192 aaKnown RBP16.02■□□□□ 0.16
IRF3-223ENST00000599223 TNFSF9P41273 254 aa16.02■□□□□ 0.16
IRF3-223ENST00000599223 GUCY2FP51841 1108 aa16.02■□□□□ 0.16
IRF3-223ENST00000599223 MCL1Q07820 350 aa16.02■□□□□ 0.16
IRF3-223ENST00000599223 GRM2Q14416 872 aa16.02■□□□□ 0.16
IRF3-223ENST00000599223 ARSHQ5FYA8 562 aa16.02■□□□□ 0.16
IRF3-223ENST00000599223 FAM78AQ5JUQ0 283 aa16.02■□□□□ 0.16
IRF3-223ENST00000599223 MCTP1Q6DN14 999 aa16.02■□□□□ 0.16
IRF3-223ENST00000599223 ZNF280DQ6N043 979 aa16.02■□□□□ 0.16
IRF3-223ENST00000599223 HS6ST3Q8IZP7 471 aa16.02■□□□□ 0.16
IRF3-223ENST00000599223 SYT2Q8N9I0 419 aaPredicted RBP16.02■□□□□ 0.16
IRF3-223ENST00000599223 DDX12PQ92771 950 aa16.02■□□□□ 0.16
IRF3-223ENST00000599223 ZSWIM3Q96MP5 696 aa16.02■□□□□ 0.16
IRF3-223ENST00000599223 TIPINQ9BVW5 301 aa16.02■□□□□ 0.16
IRF3-223ENST00000599223 HEBP1Q9NRV9 189 aa16.02■□□□□ 0.16
IRF3-223ENST00000599223 SPATA6Q9NWH7 488 aaPredicted RBP16.02■□□□□ 0.16
IRF3-223ENST00000599223 CEP72Q9P209 647 aa16.02■□□□□ 0.16
IRF3-223ENST00000599223 SCN1AP35498 2009 aa16.01■□□□□ 0.15
IRF3-223ENST00000599223 FAM170BA6NMN3 283 aa16.01■□□□□ 0.15
IRF3-223ENST00000599223 FAM189A1O60320 539 aa16.01■□□□□ 0.15
IRF3-223ENST00000599223 OR4Q2P0C623 313 aa16.01■□□□□ 0.15
IRF3-223ENST00000599223 PLA2G4BP0C869 781 aa16.01■□□□□ 0.15
IRF3-223ENST00000599223 GJA1P17302 382 aa16.01■□□□□ 0.15
IRF3-223ENST00000599223 PTPN2P17706 415 aa16.01■□□□□ 0.15
IRF3-223ENST00000599223 ID4P47928 161 aa16.01■□□□□ 0.15
IRF3-223ENST00000599223 PFKPQ01813 784 aa16.01■□□□□ 0.15
IRF3-223ENST00000599223 ADCY1Q08828 1119 aa16.01■□□□□ 0.15
IRF3-223ENST00000599223 STRN3Q13033 797 aa16.01■□□□□ 0.15
IRF3-223ENST00000599223 RILPL1Q5EBL4 403 aa16.01■□□□□ 0.15
IRF3-223ENST00000599223 ZPBP2Q6X784 338 aa16.01■□□□□ 0.15
IRF3-223ENST00000599223 RNF19BQ6ZMZ0 732 aa16.01■□□□□ 0.15
IRF3-223ENST00000599223 ZNF687Q8N1G0 1237 aa16.01■□□□□ 0.15
IRF3-223ENST00000599223 DCLK2Q8N568 766 aa16.01■□□□□ 0.15
IRF3-223ENST00000599223 SUMF1Q8NBK3 374 aa16.01■□□□□ 0.15
IRF3-223ENST00000599223 ELSPBP1Q96BH3 223 aa16.01■□□□□ 0.15
IRF3-223ENST00000599223 BCO2Q9BYV7 579 aa16.01■□□□□ 0.15
IRF3-223ENST00000599223 CRISPLD1Q9H336 500 aa16.01■□□□□ 0.15
IRF3-223ENST00000599223 SEMA4AQ9H3S1 761 aa16.01■□□□□ 0.15
IRF3-223ENST00000599223 DAXXQ9UER7 740 aaPredicted RBP16.01■□□□□ 0.15
IRF3-223ENST00000599223 PCDHB8Q9UN66 801 aa16.01■□□□□ 0.15
IRF3-223ENST00000599223 TIMM13Q9Y5L4 95 aaPredicted RBP16.01■□□□□ 0.15
IRF3-223ENST00000599223 NUP210Q8TEM1 1887 aaPredicted RBP16.01■□□□□ 0.15
IRF3-223ENST00000599223 TTC26A0AVF1 554 aa16■□□□□ 0.15
IRF3-223ENST00000599223 H7C4K7 107 aa16■□□□□ 0.15
IRF3-223ENST00000599223 PPEF2O14830 753 aa16■□□□□ 0.15
IRF3-223ENST00000599223 ELF1P32519 619 aa16■□□□□ 0.15
IRF3-223ENST00000599223 NCKAP1LP55160 1127 aa16■□□□□ 0.15
IRF3-223ENST00000599223 TWF1Q12792 350 aa16■□□□□ 0.15
IRF3-223ENST00000599223 FZD5Q13467 585 aa16■□□□□ 0.15
IRF3-223ENST00000599223 TPGS2Q68CL5 300 aa16■□□□□ 0.15
IRF3-223ENST00000599223 ZC3H14Q6PJT7 736 aaKnown RBP16■□□□□ 0.15
IRF3-223ENST00000599223 KIAA2013Q8IYS2 634 aa16■□□□□ 0.15
IRF3-223ENST00000599223 RMDN1Q96DB5 314 aa16■□□□□ 0.15
IRF3-223ENST00000599223 ASB16Q96NS5 453 aa16■□□□□ 0.15
IRF3-223ENST00000599223 REEP2Q9BRK0 252 aa16■□□□□ 0.15
IRF3-223ENST00000599223 OSBPL6Q9BZF3 934 aa16■□□□□ 0.15
IRF3-223ENST00000599223 AFF4Q9UHB7 1163 aaKnown RBP16■□□□□ 0.15
IRF3-223ENST00000599223 YIPF1Q9Y548 306 aa16■□□□□ 0.15
IRF3-223ENST00000599223 NCOR2Q9Y618 2525 aa15.99■□□□□ 0.15
IRF3-223ENST00000599223 M0QZQ0 153 aa15.99■□□□□ 0.15
IRF3-223ENST00000599223 CLDN3O15551 220 aa15.99■□□□□ 0.15
IRF3-223ENST00000599223 CPB1P15086 417 aa15.99■□□□□ 0.15
IRF3-223ENST00000599223 LRPAP1P30533 357 aa15.99■□□□□ 0.15
IRF3-223ENST00000599223 AARSP49588 968 aaKnown RBP eCLIP15.99■□□□□ 0.152e-7■■■■□ 26.2
IRF3-223ENST00000599223 GRIN1Q05586 938 aa15.99■□□□□ 0.15
IRF3-223ENST00000599223 ZBTB6Q15916 424 aa15.99■□□□□ 0.15
IRF3-223ENST00000599223 ENOX2Q16206 610 aaKnown RBP15.99■□□□□ 0.15
IRF3-223ENST00000599223 SLC39A4Q6P5W5 647 aa15.99■□□□□ 0.15
IRF3-223ENST00000599223 TSSK4Q6SA08 328 aa15.99■□□□□ 0.15
IRF3-223ENST00000599223 VITQ6UXI7 678 aa15.99■□□□□ 0.15
IRF3-223ENST00000599223 PDZD4Q76G19 769 aaPredicted RBP15.99■□□□□ 0.15
IRF3-223ENST00000599223 TTC9BQ8N6N2 239 aa15.99■□□□□ 0.15
IRF3-223ENST00000599223 BEST2Q8NFU1 509 aa15.99■□□□□ 0.15
IRF3-223ENST00000599223 CLDN23Q96B33 292 aa15.99■□□□□ 0.15
IRF3-223ENST00000599223 RSPRY1Q96DX4 576 aa15.99■□□□□ 0.15
IRF3-223ENST00000599223 KIF12Q96FN5 646 aa15.99■□□□□ 0.15
IRF3-223ENST00000599223 TMX3Q96JJ7 454 aa15.99■□□□□ 0.15
IRF3-223ENST00000599223 PGLYRP2Q96PD5 576 aa15.99■□□□□ 0.15
IRF3-223ENST00000599223 DNAJC25Q9H1X3 360 aa15.99■□□□□ 0.15
IRF3-223ENST00000599223 KIF26AQ9ULI4 1882 aaPredicted RBP15.99■□□□□ 0.15
IRF3-223ENST00000599223 TCHHQ07283 1943 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms