RNA–Protein interactions for RNA: ENST00000598309.1

USHBP1-208, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-208ENST00000598309 TMEM132DQ14C87 1099 aa18.09■□□□□ 0.49
USHBP1-208ENST00000598309 JADE1Q6IE81 842 aa18.09■□□□□ 0.49
USHBP1-208ENST00000598309 SLC8B1Q6J4K2 584 aa18.09■□□□□ 0.49
USHBP1-208ENST00000598309 SPATA31D4Q6ZUB0 917 aa18.09■□□□□ 0.49
USHBP1-208ENST00000598309 UNC13DQ70J99 1090 aa18.09■□□□□ 0.49
USHBP1-208ENST00000598309 ZDHHC14Q8IZN3 488 aa18.09■□□□□ 0.49
USHBP1-208ENST00000598309 APPL2Q8NEU8 664 aa18.09■□□□□ 0.49
USHBP1-208ENST00000598309 BEST2Q8NFU1 509 aa18.09■□□□□ 0.49
USHBP1-208ENST00000598309 FEZF2Q8TBJ5 459 aa18.09■□□□□ 0.49
USHBP1-208ENST00000598309 SMG7Q92540 1137 aaKnown RBP18.09■□□□□ 0.49
USHBP1-208ENST00000598309 PRKD2Q9BZL6 878 aa18.09■□□□□ 0.49
USHBP1-208ENST00000598309 IKZF4Q9H2S9 585 aa18.09■□□□□ 0.49
USHBP1-208ENST00000598309 PCDHB8Q9UN66 801 aa18.09■□□□□ 0.49
USHBP1-208ENST00000598309 CDY1Q9Y6F8 540 aa18.09■□□□□ 0.49
USHBP1-208ENST00000598309 UBE4BO95155 1302 aa18.08■□□□□ 0.49
USHBP1-208ENST00000598309 M0QZQ0 153 aa18.08■□□□□ 0.48
USHBP1-208ENST00000598309 KIAA0391O15091 583 aaKnown RBP18.08■□□□□ 0.48
USHBP1-208ENST00000598309 EIF3DO15371 548 aaKnown RBP eCLIP18.08■□□□□ 0.48
USHBP1-208ENST00000598309 TBC1D4O60343 1298 aa18.08■□□□□ 0.48
USHBP1-208ENST00000598309 PRPF6O94906 941 aaKnown RBP18.08■□□□□ 0.48
USHBP1-208ENST00000598309 IL18RAPO95256 599 aa18.08■□□□□ 0.48
USHBP1-208ENST00000598309 LDHAP00338 332 aaKnown RBP18.08■□□□□ 0.48
USHBP1-208ENST00000598309 SP100P23497 879 aaPredicted RBP18.08■□□□□ 0.48
USHBP1-208ENST00000598309 CMA1P23946 247 aa18.08■□□□□ 0.48
USHBP1-208ENST00000598309 OR1D2P34982 312 aa18.08■□□□□ 0.48
USHBP1-208ENST00000598309 EHHADHQ08426 723 aa18.08■□□□□ 0.48
USHBP1-208ENST00000598309 MRPL58Q14197 206 aaKnown RBP18.08■□□□□ 0.48
USHBP1-208ENST00000598309 FAM26FQ5R3K3 315 aa18.08■□□□□ 0.48
USHBP1-208ENST00000598309 ZNF280DQ6N043 979 aa18.08■□□□□ 0.48
USHBP1-208ENST00000598309 CRELD2Q6UXH1 353 aaPredicted RBP18.08■□□□□ 0.48
USHBP1-208ENST00000598309 OTOP3Q7RTS5 596 aa18.08■□□□□ 0.48
USHBP1-208ENST00000598309 NT5DC4Q86YG4 428 aa18.08■□□□□ 0.48
USHBP1-208ENST00000598309 CEP57L1Q8IYX8 460 aa18.08■□□□□ 0.48
USHBP1-208ENST00000598309 PLCD3Q8N3E9 789 aa18.08■□□□□ 0.48
USHBP1-208ENST00000598309 FAM212AQ96EL1 285 aa18.08■□□□□ 0.48
USHBP1-208ENST00000598309 SCAND2PQ9GZW5 306 aaPredicted RBP18.08■□□□□ 0.48
USHBP1-208ENST00000598309 WDR6Q9NNW5 1121 aaKnown RBP18.08■□□□□ 0.48
USHBP1-208ENST00000598309 USP25Q9UHP3 1055 aa18.08■□□□□ 0.48
USHBP1-208ENST00000598309 CLUHO75153 1309 aa18.07■□□□□ 0.48
USHBP1-208ENST00000598309 PVALEFA0A1B0GWK0 134 aa18.07■□□□□ 0.48
USHBP1-208ENST00000598309 PRR33A8MZF0 331 aa18.07■□□□□ 0.48
USHBP1-208ENST00000598309 C8AP07357 584 aa18.07■□□□□ 0.48
USHBP1-208ENST00000598309 SLFN14P0C7P3 912 aa18.07■□□□□ 0.48
USHBP1-208ENST00000598309 PTPN21Q16825 1174 aa18.07■□□□□ 0.48
USHBP1-208ENST00000598309 UVSSAQ2YD98 709 aa18.07■□□□□ 0.48
USHBP1-208ENST00000598309 RSPO2Q6UXX9 243 aaPredicted RBP18.07■□□□□ 0.48
USHBP1-208ENST00000598309 EPM2AIP1Q7L775 607 aaPredicted RBP18.07■□□□□ 0.48
USHBP1-208ENST00000598309 BRSK2Q8IWQ3 736 aa18.07■□□□□ 0.48
USHBP1-208ENST00000598309 EDAQ92838 391 aa18.07■□□□□ 0.48
USHBP1-208ENST00000598309 ACSF2Q96CM8 615 aaPredicted RBP18.07■□□□□ 0.48
USHBP1-208ENST00000598309 LRFN3Q9BTN0 628 aa18.07■□□□□ 0.48
USHBP1-208ENST00000598309 MTCL1Q9Y4B5 1905 aaKnown RBP18.07■□□□□ 0.48
USHBP1-208ENST00000598309 FAM237AA0A1B0GTK4 181 aa18.06■□□□□ 0.48
USHBP1-208ENST00000598309 ACTN4O43707 911 aaKnown RBP18.06■□□□□ 0.48
USHBP1-208ENST00000598309 EXTL3O43909 919 aa18.06■□□□□ 0.48
USHBP1-208ENST00000598309 PFKFB1P16118 471 aa18.06■□□□□ 0.48
USHBP1-208ENST00000598309 GUCY2FP51841 1108 aa18.06■□□□□ 0.48
USHBP1-208ENST00000598309 ROR1Q01973 937 aa18.06■□□□□ 0.48
USHBP1-208ENST00000598309 PPM1LQ5SGD2 360 aa18.06■□□□□ 0.48
USHBP1-208ENST00000598309 C9orf57Q5W0N0 161 aa18.06■□□□□ 0.48
USHBP1-208ENST00000598309 ZNF461Q8TAF7 563 aa18.06■□□□□ 0.48
USHBP1-208ENST00000598309 HPS3Q969F9 1004 aa18.06■□□□□ 0.48
USHBP1-208ENST00000598309 CBWD1Q9BRT8 395 aa18.06■□□□□ 0.48
USHBP1-208ENST00000598309 FAM213AQ9BRX8 229 aa18.06■□□□□ 0.48
USHBP1-208ENST00000598309 OXCT2Q9BYC2 517 aaPredicted RBP18.06■□□□□ 0.48
USHBP1-208ENST00000598309 PIDD1Q9HB75 910 aa18.06■□□□□ 0.48
USHBP1-208ENST00000598309 HPSEQ9Y251 543 aa18.06■□□□□ 0.48
USHBP1-208ENST00000598309 C2orf16Q68DN1 1984 aa18.05■□□□□ 0.48
USHBP1-208ENST00000598309 ANO9A1A5B4 782 aa18.05■□□□□ 0.48
USHBP1-208ENST00000598309 FAM86C2PA6NEL3 165 aa18.05■□□□□ 0.48
USHBP1-208ENST00000598309 PIRO00625 290 aa18.05■□□□□ 0.48
USHBP1-208ENST00000598309 OAZ2O95190 189 aa18.05■□□□□ 0.48
USHBP1-208ENST00000598309 TYMPP19971 482 aa18.05■□□□□ 0.48
USHBP1-208ENST00000598309 LILRA4P59901 499 aa18.05■□□□□ 0.48
USHBP1-208ENST00000598309 ZXDAP98168 799 aa18.05■□□□□ 0.48
USHBP1-208ENST00000598309 CTXN3Q4LDR2 81 aa18.05■□□□□ 0.48
USHBP1-208ENST00000598309 ARMCX5Q6P1M9 558 aa18.05■□□□□ 0.48
USHBP1-208ENST00000598309 TMEM130Q8N3G9 435 aa18.05■□□□□ 0.48
USHBP1-208ENST00000598309 GLIS3Q8NEA6 775 aa18.05■□□□□ 0.48
USHBP1-208ENST00000598309 SLC7A14Q8TBB6 771 aa18.05■□□□□ 0.48
USHBP1-208ENST00000598309 ZNF507Q8TCN5 953 aa18.05■□□□□ 0.48
USHBP1-208ENST00000598309 SAAL1Q96ER3 474 aa18.05■□□□□ 0.48
USHBP1-208ENST00000598309 CHAMP1Q96JM3 812 aa18.05■□□□□ 0.48
USHBP1-208ENST00000598309 BLZF1Q9H2G9 400 aa18.05■□□□□ 0.48
USHBP1-208ENST00000598309 RBAKQ9NYW8 714 aaPredicted RBP18.05■□□□□ 0.48
USHBP1-208ENST00000598309 SERTAD1Q9UHV2 236 aa18.05■□□□□ 0.48
USHBP1-208ENST00000598309 FBXL5Q9UKA1 691 aa18.05■□□□□ 0.48
USHBP1-208ENST00000598309 MAFFQ9ULX9 164 aa18.05■□□□□ 0.48
USHBP1-208ENST00000598309 A0A1B0GVL5 298 aa18.04■□□□□ 0.48
USHBP1-208ENST00000598309 A0A1W2PQ27 194 aa18.04■□□□□ 0.48
USHBP1-208ENST00000598309 A0A1W2PQ64 194 aa18.04■□□□□ 0.48
USHBP1-208ENST00000598309 A0A1W2PQD8 194 aa18.04■□□□□ 0.48
USHBP1-208ENST00000598309 ARHGEF37A1IGU5 675 aa18.04■□□□□ 0.48
USHBP1-208ENST00000598309 PPEF2O14830 753 aa18.04■□□□□ 0.48
USHBP1-208ENST00000598309 XYLBO75191 536 aa18.04■□□□□ 0.48
USHBP1-208ENST00000598309 ABLIM3O94929 683 aa18.04■□□□□ 0.48
USHBP1-208ENST00000598309 MYL1P05976 194 aa18.04■□□□□ 0.48
USHBP1-208ENST00000598309 HOXD13P35453 343 aa18.04■□□□□ 0.48
USHBP1-208ENST00000598309 AFMP43652 599 aa18.04■□□□□ 0.48
USHBP1-208ENST00000598309 SNRPFP62306 86 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms