RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 CACNA1AO00555 2505 aa18.59■□□□□ 0.57
PNKP-210ENST00000597965 WDR87Q6ZQQ6 2873 aa18.59■□□□□ 0.57
PNKP-210ENST00000597965 PATJQ8NI35 1801 aa18.58■□□□□ 0.57
PNKP-210ENST00000597965 TBC1D4O60343 1298 aa18.58■□□□□ 0.56
PNKP-210ENST00000597965 LRRN2O75325 713 aa18.58■□□□□ 0.56
PNKP-210ENST00000597965 SCP2P22307 547 aa18.58■□□□□ 0.56
PNKP-210ENST00000597965 GUCY2CP25092 1073 aa18.58■□□□□ 0.56
PNKP-210ENST00000597965 NRLP54845 237 aa18.58■□□□□ 0.56
PNKP-210ENST00000597965 MRPL58Q14197 206 aaKnown RBP18.58■□□□□ 0.56
PNKP-210ENST00000597965 NOLC1Q14978 699 aaKnown RBP eCLIP18.58■□□□□ 0.56
PNKP-210ENST00000597965 SLC5A9Q2M3M2 681 aa18.58■□□□□ 0.56
PNKP-210ENST00000597965 RINT1Q6NUQ1 792 aa18.58■□□□□ 0.56
PNKP-210ENST00000597965 ZPBP2Q6X784 338 aa18.58■□□□□ 0.56
PNKP-210ENST00000597965 SPIRE2Q8WWL2 714 aa18.58■□□□□ 0.56
PNKP-210ENST00000597965 E2F7Q96AV8 911 aa18.58■□□□□ 0.56
PNKP-210ENST00000597965 PLEKHA5Q9HAU0 1116 aa18.58■□□□□ 0.56
PNKP-210ENST00000597965 TRPV5Q9NQA5 729 aa18.58■□□□□ 0.56
PNKP-210ENST00000597965 AFF4Q9UHB7 1163 aaKnown RBP18.58■□□□□ 0.56
PNKP-210ENST00000597965 FBXL5Q9UKA1 691 aa18.58■□□□□ 0.56
PNKP-210ENST00000597965 E9PMD0 336 aa18.57■□□□□ 0.56
PNKP-210ENST00000597965 CLDN3O15551 220 aa18.57■□□□□ 0.56
PNKP-210ENST00000597965 CEBPBP17676 345 aa18.57■□□□□ 0.56
PNKP-210ENST00000597965 PSMC3P17980 439 aa18.57■□□□□ 0.56
PNKP-210ENST00000597965 CD72P21854 359 aa18.57■□□□□ 0.56
PNKP-210ENST00000597965 TARSP26639 723 aaKnown RBP18.57■□□□□ 0.56
PNKP-210ENST00000597965 PLD1Q13393 1074 aa18.57■□□□□ 0.56
PNKP-210ENST00000597965 KYAT1Q16773 422 aa18.57■□□□□ 0.56
PNKP-210ENST00000597965 PRSS36Q5K4E3 855 aa18.57■□□□□ 0.56
PNKP-210ENST00000597965 TANGO2Q6ICL3 276 aa18.57■□□□□ 0.56
PNKP-210ENST00000597965 C1orf228Q6PIY5 440 aa18.57■□□□□ 0.56
PNKP-210ENST00000597965 MAMSTRQ6ZN01 415 aa18.57■□□□□ 0.56
PNKP-210ENST00000597965 C1orf186Q6ZWK4 172 aa18.57■□□□□ 0.56
PNKP-210ENST00000597965 ZBTB44Q8NCP5 570 aa18.57■□□□□ 0.56
PNKP-210ENST00000597965 DEPDC1BQ8WUY9 529 aa18.57■□□□□ 0.56
PNKP-210ENST00000597965 SMARCD2Q92925 531 aa18.57■□□□□ 0.56
PNKP-210ENST00000597965 ZMAT2Q96NC0 199 aaKnown RBP18.57■□□□□ 0.56
PNKP-210ENST00000597965 ASAH2Q9NR71 780 aa18.57■□□□□ 0.56
PNKP-210ENST00000597965 HEBP1Q9NRV9 189 aa18.57■□□□□ 0.56
PNKP-210ENST00000597965 MTF2Q9Y483 593 aaPredicted RBP18.57■□□□□ 0.56
PNKP-210ENST00000597965 XPOTO43592 962 aaKnown RBP18.56■□□□□ 0.56
PNKP-210ENST00000597965 CPB1P15086 417 aa18.56■□□□□ 0.56
PNKP-210ENST00000597965 IGFBP6P24592 240 aaPredicted RBP18.56■□□□□ 0.56
PNKP-210ENST00000597965 DAW1Q8N136 415 aa18.56■□□□□ 0.56
PNKP-210ENST00000597965 DDX12PQ92771 950 aa18.56■□□□□ 0.56
PNKP-210ENST00000597965 MSANTD3Q96H12 275 aa18.56■□□□□ 0.56
PNKP-210ENST00000597965 CDK5RAP3Q96JB5 506 aa18.56■□□□□ 0.56
PNKP-210ENST00000597965 ASB16Q96NS5 453 aa18.56■□□□□ 0.56
PNKP-210ENST00000597965 TSPAN18Q96SJ8 248 aa18.56■□□□□ 0.56
PNKP-210ENST00000597965 ANKFY1Q9P2R3 1169 aa18.56■□□□□ 0.56
PNKP-210ENST00000597965 PCDHB8Q9UN66 801 aa18.56■□□□□ 0.56
PNKP-210ENST00000597965 SLC16A4O15374 487 aa18.55■□□□□ 0.56
PNKP-210ENST00000597965 HARSP12081 509 aaKnown RBP18.55■□□□□ 0.56
PNKP-210ENST00000597965 PLS3P13797 630 aa18.55■□□□□ 0.56
PNKP-210ENST00000597965 PAX3P23760 479 aa18.55■□□□□ 0.56
PNKP-210ENST00000597965 MLLT6P55198 1093 aaPredicted RBP18.55■□□□□ 0.56
PNKP-210ENST00000597965 YWHAHQ04917 246 aaPredicted RBP18.55■□□□□ 0.56
PNKP-210ENST00000597965 NBR1Q14596 966 aa18.55■□□□□ 0.56
PNKP-210ENST00000597965 RILPL1Q5EBL4 403 aa18.55■□□□□ 0.56
PNKP-210ENST00000597965 FAM78AQ5JUQ0 283 aa18.55■□□□□ 0.56
PNKP-210ENST00000597965 TAS1R3Q7RTX0 852 aa18.55■□□□□ 0.56
PNKP-210ENST00000597965 NELL1Q92832 810 aa18.55■□□□□ 0.56
PNKP-210ENST00000597965 TBC1D32Q96NH3 1257 aa18.55■□□□□ 0.56
PNKP-210ENST00000597965 RUSC1Q9BVN2 902 aa18.55■□□□□ 0.56
PNKP-210ENST00000597965 PLA2G2FQ9BZM2 168 aa18.55■□□□□ 0.56
PNKP-210ENST00000597965 EPC1Q9H2F5 836 aa18.55■□□□□ 0.56
PNKP-210ENST00000597965 PRMT8Q9NR22 394 aaPredicted RBP18.55■□□□□ 0.56
PNKP-210ENST00000597965 DLL3Q9NYJ7 618 aa18.55■□□□□ 0.56
PNKP-210ENST00000597965 LARSQ9P2J5 1176 aaKnown RBP18.55■□□□□ 0.56
PNKP-210ENST00000597965 PCDHB6Q9Y5E3 794 aa18.55■□□□□ 0.56
PNKP-210ENST00000597965 MYH11P35749 1972 aa18.54■□□□□ 0.56
PNKP-210ENST00000597965 PRR5-ARHGAP8B1AHC4 643 aa18.54■□□□□ 0.56
PNKP-210ENST00000597965 ABLIM1O14639 778 aa18.54■□□□□ 0.56
PNKP-210ENST00000597965 CLTAP09496 248 aa18.54■□□□□ 0.56
PNKP-210ENST00000597965 CYP3A5P20815 502 aa18.54■□□□□ 0.56
PNKP-210ENST00000597965 ABCD1P33897 745 aa18.54■□□□□ 0.56
PNKP-210ENST00000597965 MATR3P43243 847 aaKnown RBP eCLIP18.54■□□□□ 0.56
PNKP-210ENST00000597965 TOB1P50616 345 aaPredicted RBP18.54■□□□□ 0.56
PNKP-210ENST00000597965 EPHA5P54756 1037 aa18.54■□□□□ 0.56
PNKP-210ENST00000597965 ARHGAP8P85298 464 aa18.54■□□□□ 0.56
PNKP-210ENST00000597965 MCL1Q07820 350 aa18.54■□□□□ 0.56
PNKP-210ENST00000597965 TWF1Q12792 350 aa18.54■□□□□ 0.56
PNKP-210ENST00000597965 SLC10A6Q3KNW5 377 aa18.54■□□□□ 0.56
PNKP-210ENST00000597965 USP37Q86T82 979 aa18.54■□□□□ 0.56
PNKP-210ENST00000597965 C18orf25Q96B23 403 aaPredicted RBP18.54■□□□□ 0.56
PNKP-210ENST00000597965 TRPV4Q9HBA0 871 aa18.54■□□□□ 0.56
PNKP-210ENST00000597965 RAB23Q9ULC3 237 aa18.54■□□□□ 0.56
PNKP-210ENST00000597965 DMXL1Q9Y485 3027 aa18.54■□□□□ 0.56
PNKP-210ENST00000597965 ZNF263O14978 683 aa18.53■□□□□ 0.56
PNKP-210ENST00000597965 LILRB5O75023 590 aa18.53■□□□□ 0.56
PNKP-210ENST00000597965 OAZ2O95190 189 aa18.53■□□□□ 0.56
PNKP-210ENST00000597965 SEC24AO95486 1093 aa18.53■□□□□ 0.56
PNKP-210ENST00000597965 FCARP24071 287 aa18.53■□□□□ 0.56
PNKP-210ENST00000597965 CCR3P51677 355 aa18.53■□□□□ 0.56
PNKP-210ENST00000597965 LMNB2Q03252 620 aa18.53■□□□□ 0.56
PNKP-210ENST00000597965 PPP2R3AQ06190 1150 aa18.53■□□□□ 0.56
PNKP-210ENST00000597965 MAPK7Q13164 816 aa18.53■□□□□ 0.56
PNKP-210ENST00000597965 ZRSR1Q15695 479 aaKnown RBP18.53■□□□□ 0.56
PNKP-210ENST00000597965 HYIQ5T013 277 aa18.53■□□□□ 0.56
PNKP-210ENST00000597965 YAF2Q8IY57 180 aa18.53■□□□□ 0.56
PNKP-210ENST00000597965 DCLK2Q8N568 766 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms