RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 POLIQ9UNA4 740 aa16.39■□□□□ 0.21
LIG1-215ENST00000597901 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.39■□□□□ 0.21
LIG1-215ENST00000597901 XPOTO43592 962 aaKnown RBP16.38■□□□□ 0.21
LIG1-215ENST00000597901 XYLBO75191 536 aa16.38■□□□□ 0.21
LIG1-215ENST00000597901 ZSCAN22P10073 491 aaPredicted RBP16.38■□□□□ 0.21
LIG1-215ENST00000597901 IDEP14735 1019 aa16.38■□□□□ 0.21
LIG1-215ENST00000597901 ELF1P32519 619 aa16.38■□□□□ 0.21
LIG1-215ENST00000597901 GUCY2FP51841 1108 aa16.38■□□□□ 0.21
LIG1-215ENST00000597901 ROR1Q01973 937 aa16.38■□□□□ 0.21
LIG1-215ENST00000597901 NHLH1Q02575 133 aa16.38■□□□□ 0.21
LIG1-215ENST00000597901 KCNA1Q09470 495 aa16.38■□□□□ 0.21
LIG1-215ENST00000597901 POSTNQ15063 836 aa16.38■□□□□ 0.21
LIG1-215ENST00000597901 CTXN3Q4LDR2 81 aa16.38■□□□□ 0.21
LIG1-215ENST00000597901 JADE1Q6IE81 842 aa16.38■□□□□ 0.21
LIG1-215ENST00000597901 ALYREFQ86V81 257 aaKnown RBP16.38■□□□□ 0.21
LIG1-215ENST00000597901 SLC44A3Q8N4M1 653 aa16.38■□□□□ 0.21
LIG1-215ENST00000597901 SPRYD3Q8NCJ5 442 aa16.38■□□□□ 0.21
LIG1-215ENST00000597901 NXPE3Q969Y0 559 aa16.38■□□□□ 0.21
LIG1-215ENST00000597901 HVCN1Q96D96 273 aa16.38■□□□□ 0.21
LIG1-215ENST00000597901 PANK4Q9NVE7 773 aa16.38■□□□□ 0.21
LIG1-215ENST00000597901 DNMT3BQ9UBC3 853 aaKnown RBP16.38■□□□□ 0.21
LIG1-215ENST00000597901 AGO2Q9UKV8 859 aaKnown RBP16.38■□□□□ 0.21
LIG1-215ENST00000597901 PCDHB13Q9Y5F0 798 aa16.38■□□□□ 0.21
LIG1-215ENST00000597901 WDR27A2RRH5 827 aa16.37■□□□□ 0.21
LIG1-215ENST00000597901 M0QZQ0 153 aa16.37■□□□□ 0.21
LIG1-215ENST00000597901 CUTAO60888 179 aa16.37■□□□□ 0.21
LIG1-215ENST00000597901 OAZ2O95190 189 aa16.37■□□□□ 0.21
LIG1-215ENST00000597901 YEATS4O95619 227 aa16.37■□□□□ 0.21
LIG1-215ENST00000597901 POU2F2P09086 479 aa16.37■□□□□ 0.21
LIG1-215ENST00000597901 ATF2P15336 505 aa16.37■□□□□ 0.21
LIG1-215ENST00000597901 ADSSP30520 456 aa16.37■□□□□ 0.21
LIG1-215ENST00000597901 PTPN5P54829 565 aa16.37■□□□□ 0.21
LIG1-215ENST00000597901 VCPP55072 806 aaKnown RBP16.37■□□□□ 0.21
LIG1-215ENST00000597901 FOXD4L6Q3SYB3 417 aaPredicted RBP16.37■□□□□ 0.21
LIG1-215ENST00000597901 FOXD4L3Q6VB84 417 aaPredicted RBP16.37■□□□□ 0.21
LIG1-215ENST00000597901 GET4Q7L5D6 327 aaPredicted RBP16.37■□□□□ 0.21
LIG1-215ENST00000597901 BEST2Q8NFU1 509 aa16.37■□□□□ 0.21
LIG1-215ENST00000597901 ACCSQ96QU6 501 aa16.37■□□□□ 0.21
LIG1-215ENST00000597901 ASB7Q9H672 318 aa16.37■□□□□ 0.21
LIG1-215ENST00000597901 EXOC7Q9UPT5 735 aa16.37■□□□□ 0.21
LIG1-215ENST00000597901 DERAQ9Y315 318 aa16.37■□□□□ 0.21
LIG1-215ENST00000597901 TIMM13Q9Y5L4 95 aaPredicted RBP16.37■□□□□ 0.21
LIG1-215ENST00000597901 ZFP37Q9Y6Q3 630 aaPredicted RBP16.37■□□□□ 0.21
LIG1-215ENST00000597901 ARHGEF37A1IGU5 675 aa16.36■□□□□ 0.21
LIG1-215ENST00000597901 FRMD3A2A2Y4 597 aa16.36■□□□□ 0.21
LIG1-215ENST00000597901 ANHXE9PGG2 379 aa16.36■□□□□ 0.21
LIG1-215ENST00000597901 GCNT3O95395 438 aa16.36■□□□□ 0.21
LIG1-215ENST00000597901 SEC24AO95486 1093 aa16.36■□□□□ 0.21
LIG1-215ENST00000597901 F13A1P00488 732 aa16.36■□□□□ 0.21
LIG1-215ENST00000597901 AARSP49588 968 aaKnown RBP eCLIP16.36■□□□□ 0.21
LIG1-215ENST00000597901 POU5F1Q01860 360 aaKnown RBP16.36■□□□□ 0.21
LIG1-215ENST00000597901 L1TD1Q5T7N2 865 aaKnown RBP16.36■□□□□ 0.21
LIG1-215ENST00000597901 TPGS2Q68CL5 300 aa16.36■□□□□ 0.21
LIG1-215ENST00000597901 SHC4Q6S5L8 630 aa16.36■□□□□ 0.21
LIG1-215ENST00000597901 CRELD2Q6UXH1 353 aaPredicted RBP16.36■□□□□ 0.21
LIG1-215ENST00000597901 DSTYKQ6XUX3 929 aa16.36■□□□□ 0.21
LIG1-215ENST00000597901 TCEAL8Q8IYN2 117 aa16.36■□□□□ 0.21
LIG1-215ENST00000597901 ITFG1Q8TB96 612 aa16.36■□□□□ 0.21
LIG1-215ENST00000597901 POMGNT1Q8WZA1 660 aa16.36■□□□□ 0.21
LIG1-215ENST00000597901 LRRC27Q9C0I9 530 aa16.36■□□□□ 0.21
LIG1-215ENST00000597901 CYP4F11Q9HBI6 524 aa16.36■□□□□ 0.21
LIG1-215ENST00000597901 OLFML3Q9NRN5 406 aa16.36■□□□□ 0.21
LIG1-215ENST00000597901 HCFC1R1Q9NWW0 138 aa16.36■□□□□ 0.21
LIG1-215ENST00000597901 CDH7Q9ULB5 785 aa16.36■□□□□ 0.21
LIG1-215ENST00000597901 DUSP12Q9UNI6 340 aa16.36■□□□□ 0.21
LIG1-215ENST00000597901 PLXNA3P51805 1871 aa16.35■□□□□ 0.21
LIG1-215ENST00000597901 PIRO00625 290 aa16.35■□□□□ 0.21
LIG1-215ENST00000597901 PRRG1O14668 218 aa16.35■□□□□ 0.21
LIG1-215ENST00000597901 PPEF2O14830 753 aa16.35■□□□□ 0.21
LIG1-215ENST00000597901 NARSO43776 548 aaKnown RBP16.35■□□□□ 0.21
LIG1-215ENST00000597901 NFICP08651 508 aa16.35■□□□□ 0.21
LIG1-215ENST00000597901 PTPN2P17706 415 aa16.35■□□□□ 0.21
LIG1-215ENST00000597901 CASP5P51878 434 aa16.35■□□□□ 0.21
LIG1-215ENST00000597901 LILRA4P59901 499 aa16.35■□□□□ 0.21
LIG1-215ENST00000597901 TMEM132DQ14C87 1099 aa16.35■□□□□ 0.21
LIG1-215ENST00000597901 E2F4Q16254 413 aa16.35■□□□□ 0.21
LIG1-215ENST00000597901 C9orf57Q5W0N0 161 aa16.35■□□□□ 0.21
LIG1-215ENST00000597901 ZNF280DQ6N043 979 aa16.35■□□□□ 0.21
LIG1-215ENST00000597901 CCDC65Q8IXS2 484 aa16.35■□□□□ 0.21
LIG1-215ENST00000597901 ST13P5Q8NFI4 369 aaPredicted RBP16.35■□□□□ 0.21
LIG1-215ENST00000597901 FGF13Q92913 245 aa16.35■□□□□ 0.21
LIG1-215ENST00000597901 IRF2BPLQ9H1B7 796 aa16.35■□□□□ 0.21
LIG1-215ENST00000597901 KBTBD4Q9NVX7 518 aa16.35■□□□□ 0.21
LIG1-215ENST00000597901 AFF4Q9UHB7 1163 aaKnown RBP16.35■□□□□ 0.21
LIG1-215ENST00000597901 ANO9A1A5B4 782 aa16.34■□□□□ 0.21
LIG1-215ENST00000597901 SPTLC1O15269 473 aa16.34■□□□□ 0.21
LIG1-215ENST00000597901 PRPF6O94906 941 aaKnown RBP16.34■□□□□ 0.21
LIG1-215ENST00000597901 LRG1P02750 347 aa16.34■□□□□ 0.21
LIG1-215ENST00000597901 PAX3P23760 479 aa16.34■□□□□ 0.21
LIG1-215ENST00000597901 MRE11P49959 708 aa16.34■□□□□ 0.21
LIG1-215ENST00000597901 AMPD3Q01432 767 aa16.34■□□□□ 0.21
LIG1-215ENST00000597901 YWHAHQ04917 246 aaPredicted RBP16.34■□□□□ 0.21
LIG1-215ENST00000597901 ADCY1Q08828 1119 aa16.34■□□□□ 0.21
LIG1-215ENST00000597901 PKP1Q13835 747 aa16.34■□□□□ 0.21
LIG1-215ENST00000597901 PABPC1LQ4VXU2 614 aaKnown RBP16.34■□□□□ 0.21
LIG1-215ENST00000597901 ATL3Q6DD88 541 aa16.34■□□□□ 0.21
LIG1-215ENST00000597901 USP37Q86T82 979 aa16.34■□□□□ 0.21
LIG1-215ENST00000597901 SYCP3Q8IZU3 236 aa16.34■□□□□ 0.21
LIG1-215ENST00000597901 IQUBQ8NA54 791 aa16.34■□□□□ 0.21
LIG1-215ENST00000597901 PRSS33Q8NF86 280 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms