RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	SMTN	P53814	917 aa		11.49	□□□□□ -0.57
LSM4-205	ENST00000597776	PFKP	Q01813	784 aa		11.49	□□□□□ -0.57
LSM4-205	ENST00000597776	PRKCQ	Q04759	706 aa		11.49	□□□□□ -0.57
LSM4-205	ENST00000597776	MCL1	Q07820	350 aa		11.49	□□□□□ -0.57
LSM4-205	ENST00000597776	ADCY1	Q08828	1119 aa		11.49	□□□□□ -0.57
LSM4-205	ENST00000597776	RABEP1	Q15276	862 aa		11.49	□□□□□ -0.57
LSM4-205	ENST00000597776	TMEM119	Q4V9L6	283 aa		11.49	□□□□□ -0.57
LSM4-205	ENST00000597776	ARSH	Q5FYA8	562 aa		11.49	□□□□□ -0.57
LSM4-205	ENST00000597776	PRSS36	Q5K4E3	855 aa		11.49	□□□□□ -0.57
LSM4-205	ENST00000597776	ZBTB41	Q5SVQ8	909 aa		11.49	□□□□□ -0.57
LSM4-205	ENST00000597776	ZPBP2	Q6X784	338 aa		11.49	□□□□□ -0.57
LSM4-205	ENST00000597776	TPRG1	Q6ZUI0	275 aa		11.49	□□□□□ -0.57
LSM4-205	ENST00000597776	TCEAL8	Q8IYN2	117 aa		11.49	□□□□□ -0.57
LSM4-205	ENST00000597776	HS6ST3	Q8IZP7	471 aa		11.49	□□□□□ -0.57
LSM4-205	ENST00000597776	LRRC15	Q8TF66	581 aa		11.49	□□□□□ -0.57
LSM4-205	ENST00000597776	DDX12P	Q92771	950 aa		11.49	□□□□□ -0.57
LSM4-205	ENST00000597776	BICD1	Q96G01	975 aa		11.49	□□□□□ -0.57
LSM4-205	ENST00000597776	CDK5RAP3	Q96JB5	506 aa		11.49	□□□□□ -0.57
LSM4-205	ENST00000597776	AVEN	Q9NQS1	362 aa	Predicted RBP	11.49	□□□□□ -0.57
LSM4-205	ENST00000597776	SPATA6	Q9NWH7	488 aa	Predicted RBP	11.49	□□□□□ -0.57
LSM4-205	ENST00000597776	GDE1	Q9NZC3	331 aa		11.49	□□□□□ -0.57
LSM4-205	ENST00000597776	TIMM13	Q9Y5L4	95 aa	Predicted RBP	11.49	□□□□□ -0.57
LSM4-205	ENST00000597776	PDCD11	Q14690	1871 aa	Known RBP	11.49	□□□□□ -0.57
LSM4-205	ENST00000597776		H3BQV1	296 aa		11.48	□□□□□ -0.57
LSM4-205	ENST00000597776	CPB1	P15086	417 aa		11.48	□□□□□ -0.57
LSM4-205	ENST00000597776	GJA1	P17302	382 aa		11.48	□□□□□ -0.57
LSM4-205	ENST00000597776	TARS	P26639	723 aa	Known RBP	11.48	□□□□□ -0.57
LSM4-205	ENST00000597776	TNFSF9	P41273	254 aa		11.48	□□□□□ -0.57
LSM4-205	ENST00000597776	NCKAP1L	P55160	1127 aa		11.48	□□□□□ -0.57
LSM4-205	ENST00000597776	TWF1	Q12792	350 aa		11.48	□□□□□ -0.57
LSM4-205	ENST00000597776	GRM2	Q14416	872 aa		11.48	□□□□□ -0.57
LSM4-205	ENST00000597776	DHX8	Q14562	1220 aa	Known RBP	11.48	□□□□□ -0.57
LSM4-205	ENST00000597776	FAM78A	Q5JUQ0	283 aa		11.48	□□□□□ -0.57
LSM4-205	ENST00000597776	TPGS2	Q68CL5	300 aa		11.48	□□□□□ -0.57
LSM4-205	ENST00000597776	ZNF280D	Q6N043	979 aa		11.48	□□□□□ -0.57
LSM4-205	ENST00000597776	RNF19B	Q6ZMZ0	732 aa		11.48	□□□□□ -0.57
LSM4-205	ENST00000597776	PDZD4	Q76G19	769 aa	Predicted RBP	11.48	□□□□□ -0.57
LSM4-205	ENST00000597776	APPL2	Q8NEU8	664 aa		11.48	□□□□□ -0.57
LSM4-205	ENST00000597776	ELSPBP1	Q96BH3	223 aa		11.48	□□□□□ -0.57
LSM4-205	ENST00000597776	KIF12	Q96FN5	646 aa		11.48	□□□□□ -0.57
LSM4-205	ENST00000597776	ZSWIM3	Q96MP5	696 aa		11.48	□□□□□ -0.57
LSM4-205	ENST00000597776	REEP2	Q9BRK0	252 aa		11.48	□□□□□ -0.57
LSM4-205	ENST00000597776	BCO2	Q9BYV7	579 aa		11.48	□□□□□ -0.57
LSM4-205	ENST00000597776	LTB4R2	Q9NPC1	389 aa		11.48	□□□□□ -0.57
LSM4-205	ENST00000597776	HEBP1	Q9NRV9	189 aa		11.48	□□□□□ -0.57
LSM4-205	ENST00000597776	CEP72	Q9P209	647 aa		11.48	□□□□□ -0.57
LSM4-205	ENST00000597776	PCDHB8	Q9UN66	801 aa		11.48	□□□□□ -0.57
LSM4-205	ENST00000597776	MIA3	Q5JRA6	1907 aa		11.48	□□□□□ -0.57
LSM4-205	ENST00000597776	TTC26	A0AVF1	554 aa		11.47	□□□□□ -0.57
LSM4-205	ENST00000597776	PPEF2	O14830	753 aa		11.47	□□□□□ -0.57
LSM4-205	ENST00000597776	MOSPD3	O75425	235 aa		11.47	□□□□□ -0.57
LSM4-205	ENST00000597776	VNN2	O95498	520 aa		11.47	□□□□□ -0.57
LSM4-205	ENST00000597776	CLTA	P09496	248 aa		11.47	□□□□□ -0.57
LSM4-205	ENST00000597776	OR4Q2	P0C623	313 aa		11.47	□□□□□ -0.57
LSM4-205	ENST00000597776	MYL4	P12829	197 aa		11.47	□□□□□ -0.57
LSM4-205	ENST00000597776	MARCKS	P29966	332 aa	Predicted RBP	11.47	□□□□□ -0.57
LSM4-205	ENST00000597776	LIG4	P49917	911 aa		11.47	□□□□□ -0.57
LSM4-205	ENST00000597776	ENOX2	Q16206	610 aa	Known RBP	11.47	□□□□□ -0.57
LSM4-205	ENST00000597776	ZC3H14	Q6PJT7	736 aa	Known RBP	11.47	□□□□□ -0.57
LSM4-205	ENST00000597776	HAUS6	Q7Z4H7	955 aa		11.47	□□□□□ -0.57
LSM4-205	ENST00000597776	GPBP1	Q86WP2	473 aa		11.47	□□□□□ -0.57
LSM4-205	ENST00000597776	PGLYRP2	Q96PD5	576 aa		11.47	□□□□□ -0.57
LSM4-205	ENST00000597776	SEMA4A	Q9H3S1	761 aa		11.47	□□□□□ -0.57
LSM4-205	ENST00000597776	PLEKHA5	Q9HAU0	1116 aa		11.47	□□□□□ -0.57
LSM4-205	ENST00000597776	KCND2	Q9NZV8	630 aa		11.47	□□□□□ -0.57
LSM4-205	ENST00000597776	LARS	Q9P2J5	1176 aa	Known RBP	11.47	□□□□□ -0.57
LSM4-205	ENST00000597776	AFF4	Q9UHB7	1163 aa	Known RBP	11.47	□□□□□ -0.57
LSM4-205	ENST00000597776	EP300	Q09472	2414 aa	Predicted RBP	11.47	□□□□□ -0.57
LSM4-205	ENST00000597776	MYH11	P35749	1972 aa		11.47	□□□□□ -0.57
LSM4-205	ENST00000597776	PATJ	Q8NI35	1801 aa		11.46	□□□□□ -0.57
LSM4-205	ENST00000597776	CACNA1I	Q9P0X4	2223 aa		11.46	□□□□□ -0.57
LSM4-205	ENST00000597776	NCAN	O14594	1321 aa		11.46	□□□□□ -0.57
LSM4-205	ENST00000597776	SHISA7	A6NL88	538 aa		11.46	□□□□□ -0.57
LSM4-205	ENST00000597776	LACTBL1	A8MY62	500 aa		11.46	□□□□□ -0.57
LSM4-205	ENST00000597776		K7ENM7	598 aa		11.46	□□□□□ -0.57
LSM4-205	ENST00000597776		M0QZQ0	153 aa		11.46	□□□□□ -0.57
LSM4-205	ENST00000597776	ZNF197	O14709	1029 aa		11.46	□□□□□ -0.57
LSM4-205	ENST00000597776	HNRNPDL	O14979	420 aa	Known RBP	11.46	□□□□□ -0.57
LSM4-205	ENST00000597776	LAMTOR5	O43504	91 aa		11.46	□□□□□ -0.57
LSM4-205	ENST00000597776	FAM189A1	O60320	539 aa		11.46	□□□□□ -0.57
LSM4-205	ENST00000597776	LRPAP1	P30533	357 aa		11.46	□□□□□ -0.57
LSM4-205	ENST00000597776	ID4	P47928	161 aa		11.46	□□□□□ -0.57
LSM4-205	ENST00000597776	YWHAH	Q04917	246 aa	Predicted RBP	11.46	□□□□□ -0.57
LSM4-205	ENST00000597776	CSTF1	Q05048	431 aa	Known RBP	11.46	□□□□□ -0.57
LSM4-205	ENST00000597776	GRIN1	Q05586	938 aa		11.46	□□□□□ -0.57
LSM4-205	ENST00000597776	PPP2R3A	Q06190	1150 aa		11.46	□□□□□ -0.57
LSM4-205	ENST00000597776	ZBTB6	Q15916	424 aa		11.46	□□□□□ -0.57
LSM4-205	ENST00000597776	CYP4A22	Q5TCH4	519 aa		11.46	□□□□□ -0.57
LSM4-205	ENST00000597776	ARL6IP4	Q66PJ3	421 aa	Known RBP	11.46	□□□□□ -0.57
LSM4-205	ENST00000597776	IQCE	Q6IPM2	695 aa		11.46	□□□□□ -0.57
LSM4-205	ENST00000597776	KIAA2013	Q8IYS2	634 aa		11.46	□□□□□ -0.57
LSM4-205	ENST00000597776	ELMOD1	Q8N336	334 aa		11.46	□□□□□ -0.57
LSM4-205	ENST00000597776	KCTD17	Q8N5Z5	321 aa		11.46	□□□□□ -0.57
LSM4-205	ENST00000597776	ZNF512	Q96ME7	567 aa	Predicted RBP	11.46	□□□□□ -0.57
LSM4-205	ENST00000597776	ASB16	Q96NS5	453 aa		11.46	□□□□□ -0.57
LSM4-205	ENST00000597776	HINFP	Q9BQA5	517 aa		11.46	□□□□□ -0.57
LSM4-205	ENST00000597776	OSBPL6	Q9BZF3	934 aa		11.46	□□□□□ -0.57
LSM4-205	ENST00000597776	CRISPLD1	Q9H336	500 aa		11.46	□□□□□ -0.57
LSM4-205	ENST00000597776	BRD9	Q9H8M2	597 aa		11.46	□□□□□ -0.57
LSM4-205	ENST00000597776	ZFP14	Q9HCL3	533 aa		11.46	□□□□□ -0.57

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