RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 TMC2Q8TDI7 906 aa20.87■□□□□ 0.93
PNKP-207ENST00000596014 ZNF516Q92618 1163 aa20.87■□□□□ 0.93
PNKP-207ENST00000596014 BORCS6Q96GS4 357 aa20.87■□□□□ 0.93
PNKP-207ENST00000596014 ANKRD36BP1Q96IX9 119 aa20.87■□□□□ 0.93
PNKP-207ENST00000596014 TCF25Q9BQ70 676 aa20.87■□□□□ 0.93
PNKP-207ENST00000596014 NUB1Q9Y5A7 615 aa20.87■□□□□ 0.93
PNKP-207ENST00000596014 EYSQ5T1H1 3165 aa20.87■□□□□ 0.93
PNKP-207ENST00000596014 SF3B1O75533 1304 aaKnown RBP eCLIP20.87■□□□□ 0.937e-7■■■■■ 86
PNKP-207ENST00000596014 LRRIQ3A6PVS8 624 aaPredicted RBP20.86■□□□□ 0.93
PNKP-207ENST00000596014 TNNC2P02585 160 aa20.86■□□□□ 0.93
PNKP-207ENST00000596014 EPB41P11171 864 aaKnown RBP20.86■□□□□ 0.93
PNKP-207ENST00000596014 FOSL2P15408 326 aa20.86■□□□□ 0.93
PNKP-207ENST00000596014 DLG4P78352 724 aa20.86■□□□□ 0.93
PNKP-207ENST00000596014 TMC7Q7Z402 723 aa20.86■□□□□ 0.93
PNKP-207ENST00000596014 MICAL1Q8TDZ2 1067 aa20.86■□□□□ 0.93
PNKP-207ENST00000596014 CEP63Q96MT8 703 aa20.86■□□□□ 0.93
PNKP-207ENST00000596014 ZBP1Q9H171 429 aa20.86■□□□□ 0.93
PNKP-207ENST00000596014 VWA8A3KMH1 1905 aa20.86■□□□□ 0.93
PNKP-207ENST00000596014 FSCN2O14926 492 aa20.86■□□□□ 0.93
PNKP-207ENST00000596014 SLC16A3O15427 465 aaKnown RBP20.86■□□□□ 0.93
PNKP-207ENST00000596014 TRAPPC3O43617 180 aa20.86■□□□□ 0.93
PNKP-207ENST00000596014 ITGB3P05106 788 aa20.86■□□□□ 0.93
PNKP-207ENST00000596014 KRT13P13646 458 aa20.86■□□□□ 0.93
PNKP-207ENST00000596014 BRCC3P46736 316 aa20.86■□□□□ 0.93
PNKP-207ENST00000596014 VAMP7P51809 220 aa20.86■□□□□ 0.93
PNKP-207ENST00000596014 ELAVL2Q12926 359 aaKnown RBP20.86■□□□□ 0.93
PNKP-207ENST00000596014 BFSP1Q12934 665 aa20.86■□□□□ 0.93
PNKP-207ENST00000596014 CT47A1Q5JQC4 288 aaPredicted RBP20.86■□□□□ 0.93
PNKP-207ENST00000596014 SCARA3Q6AZY7 606 aa20.86■□□□□ 0.93
PNKP-207ENST00000596014 PDE12Q6L8Q7 609 aaKnown RBP20.86■□□□□ 0.93
PNKP-207ENST00000596014 FILIP1Q7Z7B0 1213 aa20.86■□□□□ 0.93
PNKP-207ENST00000596014 USP37Q86T82 979 aa20.86■□□□□ 0.93
PNKP-207ENST00000596014 CXorf38Q8TB03 319 aa20.86■□□□□ 0.93
PNKP-207ENST00000596014 SRRTQ9BXP5 876 aaKnown RBP20.86■□□□□ 0.93
PNKP-207ENST00000596014 NGRNQ9NPE2 291 aaKnown RBP20.86■□□□□ 0.93
PNKP-207ENST00000596014 ENTPD7Q9NQZ7 604 aa20.86■□□□□ 0.93
PNKP-207ENST00000596014 ITGA11Q9UKX5 1188 aa20.86■□□□□ 0.93
PNKP-207ENST00000596014 PCDHGC5Q9Y5F6 944 aa20.86■□□□□ 0.93
PNKP-207ENST00000596014 I3L4J1 428 aa20.85■□□□□ 0.93
PNKP-207ENST00000596014 IKBKBO14920 756 aa20.85■□□□□ 0.93
PNKP-207ENST00000596014 CTSAP10619 480 aa20.85■□□□□ 0.93
PNKP-207ENST00000596014 ERCC5P28715 1186 aaPredicted RBP20.85■□□□□ 0.93
PNKP-207ENST00000596014 LILRA4P59901 499 aa20.85■□□□□ 0.93
PNKP-207ENST00000596014 MCCD1P59942 119 aaPredicted RBP20.85■□□□□ 0.93
PNKP-207ENST00000596014 ENPEPQ07075 957 aa20.85■□□□□ 0.93
PNKP-207ENST00000596014 USP41Q3LFD5 358 aa20.85■□□□□ 0.93
PNKP-207ENST00000596014 TIGD5Q53EQ6 642 aa20.85■□□□□ 0.93
PNKP-207ENST00000596014 C1orf220Q5T0J3 134 aa20.85■□□□□ 0.93
PNKP-207ENST00000596014 FAM171A1Q5VUB5 890 aa20.85■□□□□ 0.93
PNKP-207ENST00000596014 TRAPPC11Q7Z392 1133 aa20.85■□□□□ 0.93
PNKP-207ENST00000596014 B3GALT6Q96L58 329 aa20.85■□□□□ 0.93
PNKP-207ENST00000596014 HERC2P3Q9BVR0 1158 aa20.85■□□□□ 0.93
PNKP-207ENST00000596014 CHST7Q9NS84 486 aa20.85■□□□□ 0.93
PNKP-207ENST00000596014 ANO10Q9NW15 660 aa20.85■□□□□ 0.93
PNKP-207ENST00000596014 SIX4Q9UIU6 781 aa20.85■□□□□ 0.93
PNKP-207ENST00000596014 POLR2BP30876 1174 aaKnown RBP20.84■□□□□ 0.93
PNKP-207ENST00000596014 AP3M2P53677 418 aa20.84■□□□□ 0.93
PNKP-207ENST00000596014 BMS1Q14692 1282 aaKnown RBP20.84■□□□□ 0.93
PNKP-207ENST00000596014 STX1AQ16623 288 aa20.84■□□□□ 0.93
PNKP-207ENST00000596014 PLPP4Q5VZY2 271 aa20.84■□□□□ 0.93
PNKP-207ENST00000596014 AUTS2Q8WXX7 1259 aa20.84■□□□□ 0.93
PNKP-207ENST00000596014 AGAP1Q9UPQ3 857 aa20.84■□□□□ 0.93
PNKP-207ENST00000596014 CXCL14O95715 111 aa20.83■□□□□ 0.93
PNKP-207ENST00000596014 KRT19P08727 400 aa20.83■□□□□ 0.93
PNKP-207ENST00000596014 RBP5P82980 135 aa20.83■□□□□ 0.93
PNKP-207ENST00000596014 SMC1AQ14683 1233 aaKnown RBP20.83■□□□□ 0.93
PNKP-207ENST00000596014 KIAA0319Q5VV43 1072 aa20.83■□□□□ 0.93
PNKP-207ENST00000596014 KIAA1841Q6NSI8 718 aa20.83■□□□□ 0.93
PNKP-207ENST00000596014 MRPL43Q8N983 215 aaKnown RBP20.83■□□□□ 0.93
PNKP-207ENST00000596014 SUSD3Q96L08 255 aa20.83■□□□□ 0.93
PNKP-207ENST00000596014 ARMCX3Q9UH62 379 aaPredicted RBP20.83■□□□□ 0.93
PNKP-207ENST00000596014 IRAK3Q9Y616 596 aa20.83■□□□□ 0.93
PNKP-207ENST00000596014 HIDE1A8MVS5 230 aa20.83■□□□□ 0.92
PNKP-207ENST00000596014 SPTLC1O15269 473 aa20.83■□□□□ 0.92
PNKP-207ENST00000596014 LETM1O95202 739 aaPredicted RBP20.83■□□□□ 0.92
PNKP-207ENST00000596014 C4BPAP04003 597 aaKnown RBP20.83■□□□□ 0.92
PNKP-207ENST00000596014 TRIM49P0CI25 452 aa20.83■□□□□ 0.92
PNKP-207ENST00000596014 TRIM49CP0CI26 452 aa20.83■□□□□ 0.92
PNKP-207ENST00000596014 FGFR3P22607 806 aa20.83■□□□□ 0.92
PNKP-207ENST00000596014 GLUD2P49448 558 aa20.83■□□□□ 0.92
PNKP-207ENST00000596014 AARSP49588 968 aaKnown RBP eCLIP20.83■□□□□ 0.92
PNKP-207ENST00000596014 TYRO3Q06418 890 aa20.83■□□□□ 0.92
PNKP-207ENST00000596014 FRMD5Q7Z6J6 570 aa20.83■□□□□ 0.92
PNKP-207ENST00000596014 CEP57Q86XR8 500 aa20.83■□□□□ 0.92
PNKP-207ENST00000596014 TTPALQ9BTX7 342 aa20.83■□□□□ 0.92
PNKP-207ENST00000596014 NSUN3Q9H649 340 aaKnown RBP20.83■□□□□ 0.92
PNKP-207ENST00000596014 MRPL17Q9NRX2 175 aaKnown RBP20.83■□□□□ 0.92
PNKP-207ENST00000596014 COL6A3P12111 3177 aa20.82■□□□□ 0.92
PNKP-207ENST00000596014 SYCE3A1L190 88 aa20.82■□□□□ 0.92
PNKP-207ENST00000596014 C2orf71A6NGG8 1288 aa20.82■□□□□ 0.92
PNKP-207ENST00000596014 C2CD2LO14523 706 aa20.82■□□□□ 0.92
PNKP-207ENST00000596014 LILRB3O75022 631 aa20.82■□□□□ 0.92
PNKP-207ENST00000596014 FGFR1OPO95684 399 aaKnown RBP20.82■□□□□ 0.92
PNKP-207ENST00000596014 CST3P01034 146 aaPredicted RBP20.82■□□□□ 0.92
PNKP-207ENST00000596014 URODP06132 367 aa20.82■□□□□ 0.92
PNKP-207ENST00000596014 PAX3P23760 479 aa20.82■□□□□ 0.92
PNKP-207ENST00000596014 TAF6P49848 677 aa20.82■□□□□ 0.92
PNKP-207ENST00000596014 DSG1Q02413 1049 aa20.82■□□□□ 0.92
PNKP-207ENST00000596014 PTPN14Q15678 1187 aa20.82■□□□□ 0.92
PNKP-207ENST00000596014 RTP2Q5QGT7 225 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms