RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 UBN1Q9NPG3 1134 aa15.86■□□□□ 0.13
SHKBP1-211ENST00000595945 TUBGCP4Q9UGJ1 667 aa15.86■□□□□ 0.13
SHKBP1-211ENST00000595945 PYCARDQ9ULZ3 195 aa15.86■□□□□ 0.13
SHKBP1-211ENST00000595945 NUB1Q9Y5A7 615 aa15.86■□□□□ 0.13
SHKBP1-211ENST00000595945 ANO9A1A5B4 782 aa15.85■□□□□ 0.13
SHKBP1-211ENST00000595945 FOXN3O00409 490 aaPredicted RBP15.85■□□□□ 0.13
SHKBP1-211ENST00000595945 ENPP3O14638 875 aa15.85■□□□□ 0.13
SHKBP1-211ENST00000595945 ARHGAP6O43182 974 aa15.85■□□□□ 0.13
SHKBP1-211ENST00000595945 XPOTO43592 962 aaKnown RBP15.85■□□□□ 0.13
SHKBP1-211ENST00000595945 TIMP1P01033 207 aa15.85■□□□□ 0.13
SHKBP1-211ENST00000595945 ITGB3P05106 788 aa15.85■□□□□ 0.13
SHKBP1-211ENST00000595945 POLR2BP30876 1174 aaKnown RBP15.85■□□□□ 0.13
SHKBP1-211ENST00000595945 SOX5P35711 763 aa15.85■□□□□ 0.13
SHKBP1-211ENST00000595945 MLH1P40692 756 aa15.85■□□□□ 0.13
SHKBP1-211ENST00000595945 PRKCIP41743 596 aa15.85■□□□□ 0.13
SHKBP1-211ENST00000595945 KCNJ6P48051 423 aa15.85■□□□□ 0.13
SHKBP1-211ENST00000595945 MFAP3P55082 362 aa15.85■□□□□ 0.13
SHKBP1-211ENST00000595945 RBP5P82980 135 aa15.85■□□□□ 0.13
SHKBP1-211ENST00000595945 SOX4Q06945 474 aaPredicted RBP15.85■□□□□ 0.13
SHKBP1-211ENST00000595945 TSR1Q2NL82 804 aaKnown RBP15.85■□□□□ 0.13
SHKBP1-211ENST00000595945 GLRA4Q5JXX5 417 aa15.85■□□□□ 0.13
SHKBP1-211ENST00000595945 CYP26C1Q6V0L0 522 aa15.85■□□□□ 0.13
SHKBP1-211ENST00000595945 ENOSF1Q7L5Y1 443 aa15.85■□□□□ 0.13
SHKBP1-211ENST00000595945 PPM1KQ8N3J5 372 aa15.85■□□□□ 0.13
SHKBP1-211ENST00000595945 JAKMIP2Q96AA8 810 aa15.85■□□□□ 0.13
SHKBP1-211ENST00000595945 ZFP42Q96MM3 310 aa15.85■□□□□ 0.13
SHKBP1-211ENST00000595945 GAD1Q99259 594 aa15.85■□□□□ 0.13
SHKBP1-211ENST00000595945 CHP1Q99653 195 aa15.85■□□□□ 0.13
SHKBP1-211ENST00000595945 ELAC1Q9H777 363 aaKnown RBP15.85■□□□□ 0.13
SHKBP1-211ENST00000595945 RSAD1Q9HA92 442 aa15.85■□□□□ 0.13
SHKBP1-211ENST00000595945 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.85■□□□□ 0.13
SHKBP1-211ENST00000595945 RNF19AQ9NV58 838 aa15.85■□□□□ 0.13
SHKBP1-211ENST00000595945 MIOSQ9NXC5 875 aa15.85■□□□□ 0.13
SHKBP1-211ENST00000595945 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.85■□□□□ 0.13
SHKBP1-211ENST00000595945 ARL5CA6NH57 179 aa15.84■□□□□ 0.13
SHKBP1-211ENST00000595945 NRDCO43847 1150 aa15.84■□□□□ 0.13
SHKBP1-211ENST00000595945 FERP16591 822 aa15.84■□□□□ 0.13
SHKBP1-211ENST00000595945 ACO1P21399 889 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-211ENST00000595945 TBXAS1P24557 533 aaPredicted RBP15.84■□□□□ 0.13
SHKBP1-211ENST00000595945 LRPAP1P30533 357 aa15.84■□□□□ 0.13
SHKBP1-211ENST00000595945 MAPK8IP2Q13387 824 aaPredicted RBP15.84■□□□□ 0.13
SHKBP1-211ENST00000595945 CUL2Q13617 745 aa15.84■□□□□ 0.13
SHKBP1-211ENST00000595945 ASIC2Q16515 512 aa15.84■□□□□ 0.13
SHKBP1-211ENST00000595945 ARHGAP44Q17R89 818 aa15.84■□□□□ 0.13
SHKBP1-211ENST00000595945 ZNF699Q32M78 642 aa15.84■□□□□ 0.13
SHKBP1-211ENST00000595945 RAD9BQ6WBX8 426 aa15.84■□□□□ 0.13
SHKBP1-211ENST00000595945 FAM71AQ8IYT1 594 aa15.84■□□□□ 0.13
SHKBP1-211ENST00000595945 CRIPAKQ8N1N5 446 aa15.84■□□□□ 0.13
SHKBP1-211ENST00000595945 IMPG2Q9BZV3 1241 aa15.84■□□□□ 0.13
SHKBP1-211ENST00000595945 NIF3L1Q9GZT8 377 aa15.84■□□□□ 0.13
SHKBP1-211ENST00000595945 ZNHIT6Q9NWK9 470 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-211ENST00000595945 TMEM161AQ9NX61 479 aa15.84■□□□□ 0.13
SHKBP1-211ENST00000595945 ARHGAP20Q9P2F6 1191 aa15.84■□□□□ 0.13
SHKBP1-211ENST00000595945 AGAP1Q9UPQ3 857 aa15.84■□□□□ 0.13
SHKBP1-211ENST00000595945 PTPRSQ13332 1948 aa15.84■□□□□ 0.13
SHKBP1-211ENST00000595945 SOWAHDA6NJG2 315 aa15.83■□□□□ 0.12
SHKBP1-211ENST00000595945 PIRO00625 290 aa15.83■□□□□ 0.12
SHKBP1-211ENST00000595945 PPEF2O14830 753 aa15.83■□□□□ 0.12
SHKBP1-211ENST00000595945 OFD1O75665 1012 aa15.83■□□□□ 0.12
SHKBP1-211ENST00000595945 SERPING1P05155 500 aa15.83■□□□□ 0.12
SHKBP1-211ENST00000595945 KRT19P08727 400 aa15.83■□□□□ 0.12
SHKBP1-211ENST00000595945 PNMA6AP0CW24 399 aaPredicted RBP15.83■□□□□ 0.12
SHKBP1-211ENST00000595945 ITGB8P26012 769 aa15.83■□□□□ 0.12
SHKBP1-211ENST00000595945 ASPAP45381 313 aa15.83■□□□□ 0.12
SHKBP1-211ENST00000595945 AFF1P51825 1210 aaKnown RBP15.83■□□□□ 0.12
SHKBP1-211ENST00000595945 C9orf57Q5W0N0 161 aa15.83■□□□□ 0.12
SHKBP1-211ENST00000595945 ZSCAN30Q86W11 494 aa15.83■□□□□ 0.12
SHKBP1-211ENST00000595945 FMNL3Q8IVF7 1028 aa15.83■□□□□ 0.12
SHKBP1-211ENST00000595945 LRRC52Q8N7C0 313 aa15.83■□□□□ 0.12
SHKBP1-211ENST00000595945 ARID3AQ99856 593 aa15.83■□□□□ 0.12
SHKBP1-211ENST00000595945 BCO2Q9BYV7 579 aa15.83■□□□□ 0.12
SHKBP1-211ENST00000595945 SLC38A7Q9NVC3 462 aa15.83■□□□□ 0.12
SHKBP1-211ENST00000595945 CNTN6Q9UQ52 1028 aa15.83■□□□□ 0.12
SHKBP1-211ENST00000595945 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.82■□□□□ 0.12
SHKBP1-211ENST00000595945 SSU72P8A0A1W2PR75 194 aa15.82■□□□□ 0.12
SHKBP1-211ENST00000595945 GFPT2O94808 682 aa15.82■□□□□ 0.12
SHKBP1-211ENST00000595945 THP07101 528 aa15.82■□□□□ 0.12
SHKBP1-211ENST00000595945 PLEKP08567 350 aaPredicted RBP15.82■□□□□ 0.12
SHKBP1-211ENST00000595945 SCNN1GP51170 649 aa15.82■□□□□ 0.12
SHKBP1-211ENST00000595945 MTF1Q14872 753 aa15.82■□□□□ 0.12
SHKBP1-211ENST00000595945 ASTE1Q2TB18 679 aaPredicted RBP15.82■□□□□ 0.12
SHKBP1-211ENST00000595945 ZNF667Q5HYK9 610 aa15.82■□□□□ 0.12
SHKBP1-211ENST00000595945 CNKSR3Q6P9H4 555 aa15.82■□□□□ 0.12
SHKBP1-211ENST00000595945 OLIG1Q8TAK6 271 aa15.82■□□□□ 0.12
SHKBP1-211ENST00000595945 KIAA1524Q8TCG1 905 aa15.82■□□□□ 0.12
SHKBP1-211ENST00000595945 HPDLQ96IR7 371 aa15.82■□□□□ 0.12
SHKBP1-211ENST00000595945 RPS6KC1Q96S38 1066 aa15.82■□□□□ 0.12
SHKBP1-211ENST00000595945 SYT11Q9BT88 431 aa15.82■□□□□ 0.12
SHKBP1-211ENST00000595945 EVI5O60447 810 aa15.81■□□□□ 0.12
SHKBP1-211ENST00000595945 CLCN1P35523 988 aa15.81■□□□□ 0.12
SHKBP1-211ENST00000595945 EIF4A3P38919 411 aaKnown RBP15.81■□□□□ 0.12
SHKBP1-211ENST00000595945 TSC2P49815 1807 aa15.81■□□□□ 0.12
SHKBP1-211ENST00000595945 KLHL30Q0D2K2 578 aa15.81■□□□□ 0.12
SHKBP1-211ENST00000595945 GRIK3Q13003 919 aa15.81■□□□□ 0.12
SHKBP1-211ENST00000595945 COL4A6Q14031 1691 aa15.81■□□□□ 0.12
SHKBP1-211ENST00000595945 CLLU1OSQ5K130 101 aa15.81■□□□□ 0.12
SHKBP1-211ENST00000595945 MFSD5Q6N075 450 aa15.81■□□□□ 0.12
SHKBP1-211ENST00000595945 DEFB128Q7Z7B8 93 aa15.81■□□□□ 0.12
SHKBP1-211ENST00000595945 GPIHBP1Q8IV16 184 aa15.81■□□□□ 0.12
SHKBP1-211ENST00000595945 CCDC170Q8IYT3 715 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms