RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 CHRNB2P17787 502 aa18.22■□□□□ 0.51
SHKBP1-205ENST00000594973 RUFY4Q6ZNE9 571 aa18.22■□□□□ 0.51
SHKBP1-205ENST00000594973 NT5DC3Q86UY8 548 aa18.22■□□□□ 0.51
SHKBP1-205ENST00000594973 TRAPPC12Q8WVT3 735 aa18.22■□□□□ 0.51
SHKBP1-205ENST00000594973 ZBTB10Q96DT7 871 aa18.22■□□□□ 0.51
SHKBP1-205ENST00000594973 STYXL1Q9Y6J8 313 aa18.22■□□□□ 0.51
SHKBP1-205ENST00000594973 CYP11B1P15538 503 aa18.21■□□□□ 0.51
SHKBP1-205ENST00000594973 PSMD6Q15008 389 aa18.21■□□□□ 0.51
SHKBP1-205ENST00000594973 QPCTQ16769 361 aa18.21■□□□□ 0.51
SHKBP1-205ENST00000594973 AGBL2Q5U5Z8 902 aa18.21■□□□□ 0.51
SHKBP1-205ENST00000594973 CAPRIN2Q6IMN6 1127 aaKnown RBP18.21■□□□□ 0.51
SHKBP1-205ENST00000594973 MAATS1Q7Z4T9 603 aa18.21■□□□□ 0.51
SHKBP1-205ENST00000594973 KIRREL3Q8IZU9 778 aa18.21■□□□□ 0.51
SHKBP1-205ENST00000594973 METTL13Q8N6R0 699 aa18.21■□□□□ 0.51
SHKBP1-205ENST00000594973 MICAL1Q8TDZ2 1067 aa18.21■□□□□ 0.51
SHKBP1-205ENST00000594973 FAM167AQ96KS9 214 aa18.21■□□□□ 0.51
SHKBP1-205ENST00000594973 KRT12Q99456 494 aa18.21■□□□□ 0.51
SHKBP1-205ENST00000594973 CORO1CQ9ULV4 474 aaPredicted RBP18.21■□□□□ 0.51
SHKBP1-205ENST00000594973 IQCA1LA6NCM1 817 aa18.21■□□□□ 0.51
SHKBP1-205ENST00000594973 SNUPNO95149 360 aaKnown RBP18.21■□□□□ 0.51
SHKBP1-205ENST00000594973 GUCY2DQ02846 1103 aa18.21■□□□□ 0.51
SHKBP1-205ENST00000594973 GJC2Q5T442 439 aaPredicted RBP18.21■□□□□ 0.51
SHKBP1-205ENST00000594973 TDRD10Q5VZ19 366 aaKnown RBP18.21■□□□□ 0.51
SHKBP1-205ENST00000594973 SLFN12LQ6IEE8 588 aa18.21■□□□□ 0.51
SHKBP1-205ENST00000594973 ZBTB33Q86T24 672 aa18.21■□□□□ 0.51
SHKBP1-205ENST00000594973 USP38Q8NB14 1042 aa18.21■□□□□ 0.51
SHKBP1-205ENST00000594973 CTTNBP2NLQ9P2B4 639 aa18.21■□□□□ 0.51
SHKBP1-205ENST00000594973 BAIAP2L1Q9UHR4 511 aa18.21■□□□□ 0.51
SHKBP1-205ENST00000594973 STXBP5LQ9Y2K9 1186 aa18.21■□□□□ 0.51
SHKBP1-205ENST00000594973 CFAP73A6NFT4 308 aa18.2■□□□□ 0.5
SHKBP1-205ENST00000594973 ZBTB42B2RXF5 422 aa18.2■□□□□ 0.5
SHKBP1-205ENST00000594973 ATMINO43313 823 aaPredicted RBP18.2■□□□□ 0.5
SHKBP1-205ENST00000594973 SKAP2O75563 359 aaPredicted RBP18.2■□□□□ 0.5
SHKBP1-205ENST00000594973 HPDP32754 393 aaPredicted RBP18.2■□□□□ 0.5
SHKBP1-205ENST00000594973 PDE6CP51160 858 aa18.2■□□□□ 0.5
SHKBP1-205ENST00000594973 MKRN4PQ13434 485 aaPredicted RBP18.2■□□□□ 0.5
SHKBP1-205ENST00000594973 SPOPLQ6IQ16 392 aa18.2■□□□□ 0.5
SHKBP1-205ENST00000594973 CCDC62Q6P9F0 684 aa18.2■□□□□ 0.5
SHKBP1-205ENST00000594973 KLHL7Q8IXQ5 586 aa18.2■□□□□ 0.5
SHKBP1-205ENST00000594973 RNF149Q8NC42 400 aa18.2■□□□□ 0.5
SHKBP1-205ENST00000594973 ATP8B4Q8TF62 1192 aa18.2■□□□□ 0.5
SHKBP1-205ENST00000594973 IFT81Q8WYA0 676 aa18.2■□□□□ 0.5
SHKBP1-205ENST00000594973 TCHPQ9BT92 498 aa18.2■□□□□ 0.5
SHKBP1-205ENST00000594973 ISCUQ9H1K1 167 aa18.2■□□□□ 0.5
SHKBP1-205ENST00000594973 C1orf112Q9NSG2 853 aa18.2■□□□□ 0.5
SHKBP1-205ENST00000594973 SUCLA2Q9P2R7 463 aaPredicted RBP18.2■□□□□ 0.5
SHKBP1-205ENST00000594973 AMFRQ9UKV5 643 aa18.2■□□□□ 0.5
SHKBP1-205ENST00000594973 MCM3APO60318 1980 aa18.2■□□□□ 0.5
SHKBP1-205ENST00000594973 A0A0B4J269 797 aa18.2■□□□□ 0.5
SHKBP1-205ENST00000594973 EME2A4GXA9 379 aaPredicted RBP18.2■□□□□ 0.5
SHKBP1-205ENST00000594973 SMNDC1O75940 238 aaKnown RBP eCLIP18.2■□□□□ 0.5
SHKBP1-205ENST00000594973 PIGRP01833 764 aa18.2■□□□□ 0.5
SHKBP1-205ENST00000594973 GJB1P08034 283 aa18.2■□□□□ 0.5
SHKBP1-205ENST00000594973 PIK3CAP42336 1068 aa18.2■□□□□ 0.5
SHKBP1-205ENST00000594973 PPP2R2AP63151 447 aa18.2■□□□□ 0.5
SHKBP1-205ENST00000594973 FMO1Q01740 532 aa18.2■□□□□ 0.5
SHKBP1-205ENST00000594973 LAMTOR4Q0VGL1 99 aa18.2■□□□□ 0.5
SHKBP1-205ENST00000594973 MYO1EQ12965 1108 aa18.2■□□□□ 0.5
SHKBP1-205ENST00000594973 C15orf39Q6ZRI6 1047 aa18.2■□□□□ 0.5
SHKBP1-205ENST00000594973 GPRC5AQ8NFJ5 357 aa18.2■□□□□ 0.5
SHKBP1-205ENST00000594973 STAMBPL1Q96FJ0 436 aa18.2■□□□□ 0.5
SHKBP1-205ENST00000594973 PBKQ96KB5 322 aa18.2■□□□□ 0.5
SHKBP1-205ENST00000594973 AP1M1Q9BXS5 423 aa18.2■□□□□ 0.5
SHKBP1-205ENST00000594973 PNMA3Q9UL41 463 aa18.2■□□□□ 0.5
SHKBP1-205ENST00000594973 LRRC37A2A6NM11 1700 aa18.19■□□□□ 0.5
SHKBP1-205ENST00000594973 CCT8L1PA6NM43 557 aa18.19■□□□□ 0.5
SHKBP1-205ENST00000594973 PDHXO00330 501 aa18.19■□□□□ 0.5
SHKBP1-205ENST00000594973 CLDN3O15551 220 aa18.19■□□□□ 0.5
SHKBP1-205ENST00000594973 HLA-DRAP01903 254 aa18.19■□□□□ 0.5
SHKBP1-205ENST00000594973 PECAM1P16284 738 aaPredicted RBP18.19■□□□□ 0.5
SHKBP1-205ENST00000594973 ZACNQ401N2 412 aa18.19■□□□□ 0.5
SHKBP1-205ENST00000594973 WDR44Q5JSH3 913 aa18.19■□□□□ 0.5
SHKBP1-205ENST00000594973 HIBCHQ6NVY1 386 aaPredicted RBP18.19■□□□□ 0.5
SHKBP1-205ENST00000594973 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.19■□□□□ 0.5
SHKBP1-205ENST00000594973 ARMCX2Q7L311 632 aa18.19■□□□□ 0.5
SHKBP1-205ENST00000594973 RHPN2Q8IUC4 686 aa18.19■□□□□ 0.5
SHKBP1-205ENST00000594973 TMEM134Q9H6X4 195 aa18.19■□□□□ 0.5
SHKBP1-205ENST00000594973 LGR5O75473 907 aa18.18■□□□□ 0.5
SHKBP1-205ENST00000594973 ANP32DO95626 131 aa18.18■□□□□ 0.5
SHKBP1-205ENST00000594973 GUCY2FP51841 1108 aa18.18■□□□□ 0.5
SHKBP1-205ENST00000594973 GPC5P78333 572 aa18.18■□□□□ 0.5
SHKBP1-205ENST00000594973 CLDN10P78369 228 aa18.18■□□□□ 0.5
SHKBP1-205ENST00000594973 TTLL4Q14679 1199 aa18.18■□□□□ 0.5
SHKBP1-205ENST00000594973 PNMA8AQ86V59 439 aaPredicted RBP18.18■□□□□ 0.5
SHKBP1-205ENST00000594973 CASKIN2Q8WXE0 1202 aa18.18■□□□□ 0.5
SHKBP1-205ENST00000594973 RAPGEF5Q92565 580 aa18.18■□□□□ 0.5
SHKBP1-205ENST00000594973 HES6Q96HZ4 224 aa18.18■□□□□ 0.5
SHKBP1-205ENST00000594973 NOP53Q9NZM5 478 aaKnown RBP18.18■□□□□ 0.5
SHKBP1-205ENST00000594973 ZSCAN5CA6NGD5 496 aaPredicted RBP18.18■□□□□ 0.5
SHKBP1-205ENST00000594973 TMEM110-MUSTN1A8MSY1 372 aa18.18■□□□□ 0.5
SHKBP1-205ENST00000594973 H0YGN5 161 aa18.18■□□□□ 0.5
SHKBP1-205ENST00000594973 CES2O00748 559 aa18.18■□□□□ 0.5
SHKBP1-205ENST00000594973 KIAA0391O15091 583 aaKnown RBP18.18■□□□□ 0.5
SHKBP1-205ENST00000594973 LDHAP00338 332 aaKnown RBP18.18■□□□□ 0.5
SHKBP1-205ENST00000594973 C4BPAP04003 597 aaKnown RBP18.18■□□□□ 0.5
SHKBP1-205ENST00000594973 ZBTB48P10074 688 aaPredicted RBP18.18■□□□□ 0.5
SHKBP1-205ENST00000594973 TNFSF9P41273 254 aa18.18■□□□□ 0.5
SHKBP1-205ENST00000594973 GCNT1Q02742 428 aa18.18■□□□□ 0.5
SHKBP1-205ENST00000594973 PPP1R7Q15435 360 aa18.18■□□□□ 0.5
SHKBP1-205ENST00000594973 IER5Q5VY09 327 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms