RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 TTC30AQ86WT1 665 aa13.15□□□□□ -0.3
ZNF558-202ENST00000593891 BPIFB1Q8TDL5 484 aa13.15□□□□□ -0.3
ZNF558-202ENST00000593891 LRRC3BQ96PB8 259 aa13.15□□□□□ -0.3
ZNF558-202ENST00000593891 PNMA5Q96PV4 448 aa13.15□□□□□ -0.3
ZNF558-202ENST00000593891 FNBP1Q96RU3 617 aa13.15□□□□□ -0.3
ZNF558-202ENST00000593891 CDC6Q99741 560 aa13.15□□□□□ -0.3
ZNF558-202ENST00000593891 KRT23Q9C075 422 aa13.15□□□□□ -0.3
ZNF558-202ENST00000593891 TBC1D22BQ9NU19 505 aa13.15□□□□□ -0.3
ZNF558-202ENST00000593891 HES2Q9Y543 173 aa13.15□□□□□ -0.3
ZNF558-202ENST00000593891 INSL5Q9Y5Q6 135 aa13.15□□□□□ -0.3
ZNF558-202ENST00000593891 AK5Q9Y6K8 562 aa13.15□□□□□ -0.3
ZNF558-202ENST00000593891 THADAQ6YHU6 1953 aa13.14□□□□□ -0.31
ZNF558-202ENST00000593891 COL5A1P20908 1838 aaPredicted RBP13.14□□□□□ -0.31
ZNF558-202ENST00000593891 GOLGA8CPA6NN73 597 aa13.14□□□□□ -0.31
ZNF558-202ENST00000593891 ALDH1A2O94788 518 aa13.14□□□□□ -0.31
ZNF558-202ENST00000593891 DKK1O94907 266 aa13.14□□□□□ -0.31
ZNF558-202ENST00000593891 KIF4AO95239 1232 aa13.14□□□□□ -0.31
ZNF558-202ENST00000593891 ATXN1LP0C7T5 689 aaKnown RBP13.14□□□□□ -0.31
ZNF558-202ENST00000593891 P2RY2P41231 377 aa13.14□□□□□ -0.31
ZNF558-202ENST00000593891 GALK1P51570 392 aa13.14□□□□□ -0.31
ZNF558-202ENST00000593891 EPHA5P54756 1037 aa13.14□□□□□ -0.31
ZNF558-202ENST00000593891 CACNB1Q02641 598 aaPredicted RBP13.14□□□□□ -0.31
ZNF558-202ENST00000593891 TUSC3Q13454 348 aa13.14□□□□□ -0.31
ZNF558-202ENST00000593891 C6orf118Q5T5N4 469 aa13.14□□□□□ -0.31
ZNF558-202ENST00000593891 ANKS3Q6ZW76 656 aa13.14□□□□□ -0.31
ZNF558-202ENST00000593891 NIPA1Q7RTP0 329 aa13.14□□□□□ -0.31
ZNF558-202ENST00000593891 SRGAP1Q7Z6B7 1085 aa13.14□□□□□ -0.31
ZNF558-202ENST00000593891 KSR1Q8IVT5 923 aa13.14□□□□□ -0.31
ZNF558-202ENST00000593891 OLIG1Q8TAK6 271 aa13.14□□□□□ -0.31
ZNF558-202ENST00000593891 SHKBP1Q8TBC3 707 aa13.14□□□□□ -0.31
ZNF558-202ENST00000593891 RLN3Q8WXF3 142 aa13.14□□□□□ -0.31
ZNF558-202ENST00000593891 P2RY13Q9BPV8 354 aa13.14□□□□□ -0.31
ZNF558-202ENST00000593891 PAAF1Q9BRP4 392 aa13.14□□□□□ -0.31
ZNF558-202ENST00000593891 EIF2AQ9BY44 585 aaKnown RBP13.14□□□□□ -0.31
ZNF558-202ENST00000593891 IFT122Q9HBG6 1241 aa13.14□□□□□ -0.31
ZNF558-202ENST00000593891 PDCD11Q14690 1871 aaKnown RBP13.13□□□□□ -0.31
ZNF558-202ENST00000593891 AP5Z1O43299 807 aa13.13□□□□□ -0.31
ZNF558-202ENST00000593891 ABLIM3O94929 683 aa13.13□□□□□ -0.31
ZNF558-202ENST00000593891 ATF2P15336 505 aa13.13□□□□□ -0.31
ZNF558-202ENST00000593891 FGFR3P22607 806 aa13.13□□□□□ -0.31
ZNF558-202ENST00000593891 PRKCEQ02156 737 aa13.13□□□□□ -0.31
ZNF558-202ENST00000593891 NCBP1Q09161 790 aaKnown RBP13.13□□□□□ -0.31
ZNF558-202ENST00000593891 SEC23AQ15436 765 aa13.13□□□□□ -0.31
ZNF558-202ENST00000593891 SMAD1Q15797 465 aaKnown RBP13.13□□□□□ -0.31
ZNF558-202ENST00000593891 PLA2G4DQ86XP0 818 aa13.13□□□□□ -0.31
ZNF558-202ENST00000593891 GSTCDQ8NEC7 633 aa13.13□□□□□ -0.31
ZNF558-202ENST00000593891 MDGA1Q8NFP4 955 aa13.13□□□□□ -0.31
ZNF558-202ENST00000593891 SNIP1Q8TAD8 396 aaKnown RBP13.13□□□□□ -0.31
ZNF558-202ENST00000593891 TRIM6Q9C030 488 aaPredicted RBP13.13□□□□□ -0.31
ZNF558-202ENST00000593891 PRDM16Q9HAZ2 1276 aa13.13□□□□□ -0.31
ZNF558-202ENST00000593891 FBRSL1Q9HCM7 1045 aaKnown RBP13.13□□□□□ -0.31
ZNF558-202ENST00000593891 TOR4AQ9NXH8 423 aa13.13□□□□□ -0.31
ZNF558-202ENST00000593891 CACNG4Q9UBN1 327 aa13.13□□□□□ -0.31
ZNF558-202ENST00000593891 SEPT3Q9UH03 358 aa13.13□□□□□ -0.31
ZNF558-202ENST00000593891 LRRK2Q5S007 2527 aa13.12□□□□□ -0.31
ZNF558-202ENST00000593891 CASTOR2A6NHX0 329 aa13.12□□□□□ -0.31
ZNF558-202ENST00000593891 ERLIN2O94905 339 aa13.12□□□□□ -0.31
ZNF558-202ENST00000593891 MCM2P49736 904 aa13.12□□□□□ -0.31
ZNF558-202ENST00000593891 ROR1Q01973 937 aa13.12□□□□□ -0.31
ZNF558-202ENST00000593891 KCNH2Q12809 1159 aa13.12□□□□□ -0.31
ZNF558-202ENST00000593891 RUNX3Q13761 415 aa13.12□□□□□ -0.31
ZNF558-202ENST00000593891 TARBP2Q15633 366 aaKnown RBP13.12□□□□□ -0.31
ZNF558-202ENST00000593891 FGF11Q92914 225 aa13.12□□□□□ -0.31
ZNF558-202ENST00000593891 CCDC51Q96ER9 411 aa13.12□□□□□ -0.31
ZNF558-202ENST00000593891 CNNM2Q9H8M5 875 aa13.12□□□□□ -0.31
ZNF558-202ENST00000593891 GKN1Q9NS71 199 aa13.12□□□□□ -0.31
ZNF558-202ENST00000593891 CEP72Q9P209 647 aa13.12□□□□□ -0.31
ZNF558-202ENST00000593891 MGAQ8IWI9 3026 aa13.12□□□□□ -0.31
ZNF558-202ENST00000593891 FBN2P35556 2912 aa13.12□□□□□ -0.31
ZNF558-202ENST00000593891 ATMQ13315 3056 aa13.11□□□□□ -0.31
ZNF558-202ENST00000593891 GOLGA4Q13439 2230 aaKnown RBP13.11□□□□□ -0.31
ZNF558-202ENST00000593891 IGKV6-21A0A0C4DH24 114 aa13.11□□□□□ -0.31
ZNF558-202ENST00000593891 A0A1W2PRU2 124 aa13.11□□□□□ -0.31
ZNF558-202ENST00000593891 TERTO14746 1132 aaKnown RBP13.11□□□□□ -0.31
ZNF558-202ENST00000593891 CR2P20023 1033 aa13.11□□□□□ -0.31
ZNF558-202ENST00000593891 AKAP5P24588 427 aa13.11□□□□□ -0.31
ZNF558-202ENST00000593891 UCNP55089 124 aa13.11□□□□□ -0.31
ZNF558-202ENST00000593891 ARPP19P56211 112 aa13.11□□□□□ -0.31
ZNF558-202ENST00000593891 CCDC173Q0VFZ6 552 aa13.11□□□□□ -0.31
ZNF558-202ENST00000593891 TWF1Q12792 350 aa13.11□□□□□ -0.31
ZNF558-202ENST00000593891 SART3Q15020 963 aaKnown RBP13.11□□□□□ -0.31
ZNF558-202ENST00000593891 MTERF2Q49AM1 385 aa13.11□□□□□ -0.31
ZNF558-202ENST00000593891 SLC8B1Q6J4K2 584 aa13.11□□□□□ -0.31
ZNF558-202ENST00000593891 NOTUMQ6P988 496 aa13.11□□□□□ -0.31
ZNF558-202ENST00000593891 ATG14Q6ZNE5 492 aa13.11□□□□□ -0.31
ZNF558-202ENST00000593891 SPACA3Q8IXA5 215 aa13.11□□□□□ -0.31
ZNF558-202ENST00000593891 PI4K2BQ8TCG2 481 aa13.11□□□□□ -0.31
ZNF558-202ENST00000593891 WHAMMQ8TF30 809 aa13.11□□□□□ -0.31
ZNF558-202ENST00000593891 FAM227BQ96M60 508 aa13.11□□□□□ -0.31
ZNF558-202ENST00000593891 ZNF577Q9BSK1 485 aa13.11□□□□□ -0.31
ZNF558-202ENST00000593891 SPZ1Q9BXG8 430 aa13.11□□□□□ -0.31
ZNF558-202ENST00000593891 PARP2Q9UGN5 583 aa13.11□□□□□ -0.31
ZNF558-202ENST00000593891 VWA8A3KMH1 1905 aa13.11□□□□□ -0.31
ZNF558-202ENST00000593891 PTPRBP23467 1997 aa13.11□□□□□ -0.31
ZNF558-202ENST00000593891 SEC24AO95486 1093 aa13.1□□□□□ -0.31
ZNF558-202ENST00000593891 FOSP01100 380 aaPredicted RBP13.1□□□□□ -0.31
ZNF558-202ENST00000593891 SMARCA1P28370 1054 aa13.1□□□□□ -0.31
ZNF558-202ENST00000593891 AXLP30530 894 aa13.1□□□□□ -0.31
ZNF558-202ENST00000593891 TMPRSS3P57727 454 aa13.1□□□□□ -0.31
ZNF558-202ENST00000593891 PLEKHG6Q3KR16 790 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms