RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 LAD1O00515 517 aa17.87■□□□□ 0.45
LIG1-205ENST00000593425 MAGEA9P43362 315 aa17.87■□□□□ 0.45
LIG1-205ENST00000593425 ADCY1Q08828 1119 aa17.87■□□□□ 0.45
LIG1-205ENST00000593425 FZD5Q13467 585 aa17.87■□□□□ 0.45
LIG1-205ENST00000593425 NOLC1Q14978 699 aaKnown RBP eCLIP17.87■□□□□ 0.45
LIG1-205ENST00000593425 FAM78AQ5JUQ0 283 aa17.87■□□□□ 0.45
LIG1-205ENST00000593425 ZNF280DQ6N043 979 aa17.87■□□□□ 0.45
LIG1-205ENST00000593425 TSSK4Q6SA08 328 aa17.87■□□□□ 0.45
LIG1-205ENST00000593425 DTHD1Q6ZMT9 781 aa17.87■□□□□ 0.45
LIG1-205ENST00000593425 PDZD4Q76G19 769 aaPredicted RBP17.87■□□□□ 0.45
LIG1-205ENST00000593425 DDX12PQ92771 950 aa17.87■□□□□ 0.45
LIG1-205ENST00000593425 DNASE1L2Q92874 299 aa17.87■□□□□ 0.45
LIG1-205ENST00000593425 TBC1D32Q96NH3 1257 aa17.87■□□□□ 0.45
LIG1-205ENST00000593425 PNMA5Q96PV4 448 aa17.87■□□□□ 0.45
LIG1-205ENST00000593425 C17orf75Q9HAS0 396 aa17.87■□□□□ 0.45
LIG1-205ENST00000593425 SPTLC1O15269 473 aa17.86■□□□□ 0.45
LIG1-205ENST00000593425 MOSPD3O75425 235 aa17.86■□□□□ 0.45
LIG1-205ENST00000593425 TOM1L1O75674 476 aa17.86■□□□□ 0.45
LIG1-205ENST00000593425 GUCY2CP25092 1073 aa17.86■□□□□ 0.45
LIG1-205ENST00000593425 SPAG1Q07617 926 aa17.86■□□□□ 0.45
LIG1-205ENST00000593425 ZRSR1Q15695 479 aaKnown RBP17.86■□□□□ 0.45
LIG1-205ENST00000593425 TPGS2Q68CL5 300 aa17.86■□□□□ 0.45
LIG1-205ENST00000593425 TMEM161BQ8NDZ6 487 aa17.86■□□□□ 0.45
LIG1-205ENST00000593425 ZSWIM3Q96MP5 696 aa17.86■□□□□ 0.45
LIG1-205ENST00000593425 ASB16Q96NS5 453 aa17.86■□□□□ 0.45
LIG1-205ENST00000593425 NTPCRQ9BSD7 190 aaKnown RBP17.86■□□□□ 0.45
LIG1-205ENST00000593425 TIPINQ9BVW5 301 aa17.86■□□□□ 0.45
LIG1-205ENST00000593425 HAPLN2Q9GZV7 340 aa17.86■□□□□ 0.45
LIG1-205ENST00000593425 ZFP14Q9HCL3 533 aa17.86■□□□□ 0.45
LIG1-205ENST00000593425 CEP72Q9P209 647 aa17.86■□□□□ 0.45
LIG1-205ENST00000593425 NCANO14594 1321 aa17.86■□□□□ 0.45
LIG1-205ENST00000593425 MED19A0JLT2 244 aaPredicted RBP17.85■□□□□ 0.45
LIG1-205ENST00000593425 ZNF197O14709 1029 aa17.85■□□□□ 0.45
LIG1-205ENST00000593425 MICAL2O94851 1124 aa17.85■□□□□ 0.45
LIG1-205ENST00000593425 CXCL8P10145 99 aa17.85■□□□□ 0.45
LIG1-205ENST00000593425 MAPTP10636 758 aaKnown RBP17.85■□□□□ 0.45
LIG1-205ENST00000593425 PLS3P13797 630 aa17.85■□□□□ 0.45
LIG1-205ENST00000593425 GJA1P17302 382 aa17.85■□□□□ 0.45
LIG1-205ENST00000593425 RPS9P46781 194 aaKnown RBP17.85■□□□□ 0.45
LIG1-205ENST00000593425 TWF1Q12792 350 aa17.85■□□□□ 0.45
LIG1-205ENST00000593425 STRN3Q13033 797 aa17.85■□□□□ 0.45
LIG1-205ENST00000593425 HYIQ5T013 277 aa17.85■□□□□ 0.45
LIG1-205ENST00000593425 VITQ6UXI7 678 aa17.85■□□□□ 0.45
LIG1-205ENST00000593425 ZNF852Q6ZMS4 543 aa17.85■□□□□ 0.45
LIG1-205ENST00000593425 RNF19BQ6ZMZ0 732 aa17.85■□□□□ 0.45
LIG1-205ENST00000593425 ZBTB44Q8NCP5 570 aa17.85■□□□□ 0.45
LIG1-205ENST00000593425 SPIRE2Q8WWL2 714 aa17.85■□□□□ 0.45
LIG1-205ENST00000593425 NELL1Q92832 810 aa17.85■□□□□ 0.45
LIG1-205ENST00000593425 NELL2Q99435 816 aa17.85■□□□□ 0.45
LIG1-205ENST00000593425 PLIN2Q99541 437 aa17.85■□□□□ 0.45
LIG1-205ENST00000593425 BRD9Q9H8M2 597 aa17.85■□□□□ 0.45
LIG1-205ENST00000593425 AFF4Q9UHB7 1163 aaKnown RBP17.85■□□□□ 0.45
LIG1-205ENST00000593425 PCDHB8Q9UN66 801 aa17.85■□□□□ 0.45
LIG1-205ENST00000593425 PCDHGA2Q9Y5H1 932 aa17.85■□□□□ 0.45
LIG1-205ENST00000593425 OTOGLQ3ZCN5 2332 aa17.84■□□□□ 0.45
LIG1-205ENST00000593425 TSC2P49815 1807 aa17.84■□□□□ 0.45
LIG1-205ENST00000593425 DMXL1Q9Y485 3027 aa17.84■□□□□ 0.45
LIG1-205ENST00000593425 ZNF292O60281 2723 aa17.84■□□□□ 0.45
LIG1-205ENST00000593425 NCAM2O15394 837 aa17.84■□□□□ 0.45
LIG1-205ENST00000593425 VNN2O95498 520 aa17.84■□□□□ 0.45
LIG1-205ENST00000593425 MYL4P12829 197 aa17.84■□□□□ 0.45
LIG1-205ENST00000593425 CPB1P15086 417 aa17.84■□□□□ 0.45
LIG1-205ENST00000593425 ATP2C1P98194 919 aaPredicted RBP17.84■□□□□ 0.45
LIG1-205ENST00000593425 CACNB1Q02641 598 aaPredicted RBP17.84■□□□□ 0.45
LIG1-205ENST00000593425 MCL1Q07820 350 aa17.84■□□□□ 0.45
LIG1-205ENST00000593425 ZPBP2Q6X784 338 aa17.84■□□□□ 0.45
LIG1-205ENST00000593425 DGLUCYQ7Z3D6 616 aa17.84■□□□□ 0.45
LIG1-205ENST00000593425 ZNF687Q8N1G0 1237 aa17.84■□□□□ 0.45
LIG1-205ENST00000593425 ELMOD1Q8N336 334 aa17.84■□□□□ 0.45
LIG1-205ENST00000593425 SYT2Q8N9I0 419 aaPredicted RBP17.84■□□□□ 0.45
LIG1-205ENST00000593425 APPL2Q8NEU8 664 aa17.84■□□□□ 0.45
LIG1-205ENST00000593425 TRMT61BQ9BVS5 477 aaKnown RBP17.84■□□□□ 0.45
LIG1-205ENST00000593425 PRMT8Q9NR22 394 aaPredicted RBP17.84■□□□□ 0.45
LIG1-205ENST00000593425 ZSCAN32Q9NX65 697 aa17.84■□□□□ 0.45
LIG1-205ENST00000593425 NDRG2Q9UN36 371 aaKnown RBP17.84■□□□□ 0.45
LIG1-205ENST00000593425 TIMM13Q9Y5L4 95 aaPredicted RBP17.84■□□□□ 0.45
LIG1-205ENST00000593425 EP300Q09472 2414 aaPredicted RBP17.84■□□□□ 0.45
LIG1-205ENST00000593425 NPHP3-ACAD11A0A0J9YXS1 232 aa17.83■□□□□ 0.44
LIG1-205ENST00000593425 M0QZQ0 153 aa17.83■□□□□ 0.44
LIG1-205ENST00000593425 CLDN3O15551 220 aa17.83■□□□□ 0.44
LIG1-205ENST00000593425 LILRB5O75023 590 aa17.83■□□□□ 0.44
LIG1-205ENST00000593425 OR4Q2P0C623 313 aa17.83■□□□□ 0.44
LIG1-205ENST00000593425 TNFSF9P41273 254 aa17.83■□□□□ 0.44
LIG1-205ENST00000593425 VIPR2P41587 438 aa17.83■□□□□ 0.44
LIG1-205ENST00000593425 EPHA5P54756 1037 aa17.83■□□□□ 0.44
LIG1-205ENST00000593425 SLC12A3P55017 1021 aa17.83■□□□□ 0.44
LIG1-205ENST00000593425 MTAPQ13126 283 aa17.83■□□□□ 0.44
LIG1-205ENST00000593425 CYP4A22Q5TCH4 519 aa17.83■□□□□ 0.44
LIG1-205ENST00000593425 IQCEQ6IPM2 695 aa17.83■□□□□ 0.44
LIG1-205ENST00000593425 MAP4K3Q8IVH8 894 aa17.83■□□□□ 0.44
LIG1-205ENST00000593425 ATRIPQ8WXE1 791 aa17.83■□□□□ 0.44
LIG1-205ENST00000593425 SMARCD2Q92925 531 aa17.83■□□□□ 0.44
LIG1-205ENST00000593425 ZNF512Q96ME7 567 aaPredicted RBP17.83■□□□□ 0.44
LIG1-205ENST00000593425 ZNF334Q9HCZ1 680 aaPredicted RBP17.83■□□□□ 0.44
LIG1-205ENST00000593425 NCDNQ9UBB6 729 aa17.83■□□□□ 0.44
LIG1-205ENST00000593425 MRPS17Q9Y2R5 130 aaKnown RBP17.83■□□□□ 0.44
LIG1-205ENST00000593425 YIPF1Q9Y548 306 aa17.83■□□□□ 0.44
LIG1-205ENST00000593425 ANK1P16157 1881 aa17.83■□□□□ 0.44
LIG1-205ENST00000593425 DNAH14Q0VDD8 3507 aa17.83■□□□□ 0.44
LIG1-205ENST00000593425 TTC26A0AVF1 554 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms