RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 B3GAT3O94766 335 aa14.42□□□□□ -0.1
H3F3B-213ENST00000593254 MYBP10242 640 aa14.42□□□□□ -0.1
H3F3B-213ENST00000593254 SCP2P22307 547 aa14.42□□□□□ -0.1
H3F3B-213ENST00000593254 FGFR3P22607 806 aa14.42□□□□□ -0.1
H3F3B-213ENST00000593254 MCL1Q07820 350 aa14.42□□□□□ -0.1
H3F3B-213ENST00000593254 DHX8Q14562 1220 aaKnown RBP14.42□□□□□ -0.1
H3F3B-213ENST00000593254 MCM6Q14566 821 aa14.42□□□□□ -0.1
H3F3B-213ENST00000593254 PDXDC1Q6P996 788 aa14.42□□□□□ -0.1
H3F3B-213ENST00000593254 HAUS6Q7Z4H7 955 aa14.42□□□□□ -0.1
H3F3B-213ENST00000593254 GPR161Q8N6U8 529 aaKnown RBP14.42□□□□□ -0.1
H3F3B-213ENST00000593254 RASSF8Q8NHQ8 419 aa14.42□□□□□ -0.1
H3F3B-213ENST00000593254 SLC38A7Q9NVC3 462 aa14.42□□□□□ -0.1
H3F3B-213ENST00000593254 FBXO2Q9UK22 296 aaPredicted RBP14.42□□□□□ -0.1
H3F3B-213ENST00000593254 FBXW11Q9UKB1 542 aa14.42□□□□□ -0.1
H3F3B-213ENST00000593254 FBXO4Q9UKT5 387 aa14.42□□□□□ -0.1
H3F3B-213ENST00000593254 NUMBLQ9Y6R0 609 aa14.42□□□□□ -0.1
H3F3B-213ENST00000593254 CLDN3O15551 220 aa14.41□□□□□ -0.1
H3F3B-213ENST00000593254 HARSP12081 509 aaKnown RBP14.41□□□□□ -0.1
H3F3B-213ENST00000593254 FAM173BQ6P4H8 233 aa14.41□□□□□ -0.1
H3F3B-213ENST00000593254 USP49Q70CQ1 688 aa14.41□□□□□ -0.1
H3F3B-213ENST00000593254 LARP4BQ92615 738 aaKnown RBP14.41□□□□□ -0.1
H3F3B-213ENST00000593254 NELL1Q92832 810 aa14.41□□□□□ -0.1
H3F3B-213ENST00000593254 DDX27Q96GQ7 796 aaKnown RBP14.41□□□□□ -0.1
H3F3B-213ENST00000593254 SHDQ96IW2 340 aa14.41□□□□□ -0.1
H3F3B-213ENST00000593254 EPSTI1Q96J88 318 aa14.41□□□□□ -0.1
H3F3B-213ENST00000593254 HAPLN2Q9GZV7 340 aa14.41□□□□□ -0.1
H3F3B-213ENST00000593254 PARVGQ9HBI0 331 aa14.41□□□□□ -0.1
H3F3B-213ENST00000593254 MTMR6Q9Y217 621 aa14.41□□□□□ -0.1
H3F3B-213ENST00000593254 FARP1Q9Y4F1 1045 aaPredicted RBP14.41□□□□□ -0.1
H3F3B-213ENST00000593254 PCDHGA2Q9Y5H1 932 aa14.41□□□□□ -0.1
H3F3B-213ENST00000593254 SRPRBQ9Y5M8 271 aaKnown RBP14.41□□□□□ -0.1
H3F3B-213ENST00000593254 MORC2Q9Y6X9 1032 aaPredicted RBP14.41□□□□□ -0.1
H3F3B-213ENST00000593254 CEP295Q9C0D2 2601 aa14.41□□□□□ -0.1
H3F3B-213ENST00000593254 F5P12259 2224 aa14.41□□□□□ -0.1
H3F3B-213ENST00000593254 ATRXP46100 2492 aa14.4□□□□□ -0.1
H3F3B-213ENST00000593254 ANK1P16157 1881 aa14.4□□□□□ -0.1
H3F3B-213ENST00000593254 KANSL1LA0AUZ9 987 aa14.4□□□□□ -0.1
H3F3B-213ENST00000593254 PRR5-ARHGAP8B1AHC4 643 aa14.4□□□□□ -0.1
H3F3B-213ENST00000593254 K7ENM7 598 aa14.4□□□□□ -0.1
H3F3B-213ENST00000593254 PODXLO00592 558 aa14.4□□□□□ -0.1
H3F3B-213ENST00000593254 ADAM12O43184 909 aa14.4□□□□□ -0.1
H3F3B-213ENST00000593254 TRAPPC3O43617 180 aa14.4□□□□□ -0.1
H3F3B-213ENST00000593254 ZMYND10O75800 440 aa14.4□□□□□ -0.1
H3F3B-213ENST00000593254 FAM13AO94988 1023 aa14.4□□□□□ -0.1
H3F3B-213ENST00000593254 PIGRP01833 764 aa14.4□□□□□ -0.1
H3F3B-213ENST00000593254 TGM1P22735 817 aa14.4□□□□□ -0.1
H3F3B-213ENST00000593254 MARCKSP29966 332 aaPredicted RBP14.4□□□□□ -0.1
H3F3B-213ENST00000593254 DDIT3P35638 169 aa14.4□□□□□ -0.1
H3F3B-213ENST00000593254 ARHGAP8P85298 464 aa14.4□□□□□ -0.1
H3F3B-213ENST00000593254 SLC10A6Q3KNW5 377 aa14.4□□□□□ -0.1
H3F3B-213ENST00000593254 SEZ6Q53EL9 994 aa14.4□□□□□ -0.1
H3F3B-213ENST00000593254 GET4Q7L5D6 327 aaPredicted RBP14.4□□□□□ -0.1
H3F3B-213ENST00000593254 MYCT1Q8N699 235 aa14.4□□□□□ -0.1
H3F3B-213ENST00000593254 ZBTB44Q8NCP5 570 aa14.4□□□□□ -0.1
H3F3B-213ENST00000593254 FGF14Q92915 247 aa14.4□□□□□ -0.1
H3F3B-213ENST00000593254 FIZ1Q96SL8 496 aa14.4□□□□□ -0.1
H3F3B-213ENST00000593254 RPP25Q9BUL9 199 aaKnown RBP14.4□□□□□ -0.1
H3F3B-213ENST00000593254 OSBPL6Q9BZF3 934 aa14.4□□□□□ -0.1
H3F3B-213ENST00000593254 PRKD2Q9BZL6 878 aa14.4□□□□□ -0.1
H3F3B-213ENST00000593254 EPC1Q9H2F5 836 aa14.4□□□□□ -0.1
H3F3B-213ENST00000593254 NCDNQ9UBB6 729 aa14.4□□□□□ -0.1
H3F3B-213ENST00000593254 MTRRQ9UBK8 725 aa14.4□□□□□ -0.1
H3F3B-213ENST00000593254 ZFP37Q9Y6Q3 630 aaPredicted RBP14.4□□□□□ -0.1
H3F3B-213ENST00000593254 NOTCH4Q99466 2003 aa14.4□□□□□ -0.1
H3F3B-213ENST00000593254 FRYQ5TBA9 3013 aa14.39□□□□□ -0.11
H3F3B-213ENST00000593254 FAM208BQ5VWN6 2430 aa14.39□□□□□ -0.11
H3F3B-213ENST00000593254 I3L4J1 428 aa14.39□□□□□ -0.11
H3F3B-213ENST00000593254 HNRNPDLO14979 420 aaKnown RBP14.39□□□□□ -0.11
H3F3B-213ENST00000593254 STX6O43752 255 aa14.39□□□□□ -0.11
H3F3B-213ENST00000593254 TRAK2O60296 914 aa14.39□□□□□ -0.11
H3F3B-213ENST00000593254 LILRB5O75023 590 aa14.39□□□□□ -0.11
H3F3B-213ENST00000593254 TBCAO75347 108 aaKnown RBP14.39□□□□□ -0.11
H3F3B-213ENST00000593254 KRT18P05783 430 aaKnown RBP14.39□□□□□ -0.11
H3F3B-213ENST00000593254 CXCL8P10145 99 aa14.39□□□□□ -0.11
H3F3B-213ENST00000593254 TKTP29401 623 aaKnown RBP14.39□□□□□ -0.11
H3F3B-213ENST00000593254 RPL9P32969 192 aaKnown RBP14.39□□□□□ -0.11
H3F3B-213ENST00000593254 BRCC3P46736 316 aa14.39□□□□□ -0.11
H3F3B-213ENST00000593254 GPC5P78333 572 aa14.39□□□□□ -0.11
H3F3B-213ENST00000593254 RAB33AQ14088 237 aa14.39□□□□□ -0.11
H3F3B-213ENST00000593254 ANKS3Q6ZW76 656 aa14.39□□□□□ -0.11
H3F3B-213ENST00000593254 ST13P5Q8NFI4 369 aaPredicted RBP14.39□□□□□ -0.11
H3F3B-213ENST00000593254 C18orf25Q96B23 403 aaPredicted RBP14.39□□□□□ -0.11
H3F3B-213ENST00000593254 BICD1Q96G01 975 aa14.39□□□□□ -0.11
H3F3B-213ENST00000593254 BCO2Q9BYV7 579 aa14.39□□□□□ -0.11
H3F3B-213ENST00000593254 PLEKHA5Q9HAU0 1116 aa14.39□□□□□ -0.11
H3F3B-213ENST00000593254 PIDD1Q9HB75 910 aa14.39□□□□□ -0.11
H3F3B-213ENST00000593254 STK17AQ9UEE5 414 aa14.39□□□□□ -0.11
H3F3B-213ENST00000593254 TBX20Q9UMR3 447 aa14.39□□□□□ -0.11
H3F3B-213ENST00000593254 MTF2Q9Y483 593 aaPredicted RBP14.39□□□□□ -0.11
H3F3B-213ENST00000593254 BACE2Q9Y5Z0 518 aa14.39□□□□□ -0.11
H3F3B-213ENST00000593254 TTC26A0AVF1 554 aa14.38□□□□□ -0.11
H3F3B-213ENST00000593254 LAMTOR5O43504 91 aa14.38□□□□□ -0.11
H3F3B-213ENST00000593254 FAM189A1O60320 539 aa14.38□□□□□ -0.11
H3F3B-213ENST00000593254 CLTAP09496 248 aa14.38□□□□□ -0.11
H3F3B-213ENST00000593254 HNRNPA1P09651 372 aaKnown RBP eCLIP14.38□□□□□ -0.11
H3F3B-213ENST00000593254 HOXA9P31269 272 aa14.38□□□□□ -0.11
H3F3B-213ENST00000593254 ABCD1P33897 745 aa14.38□□□□□ -0.11
H3F3B-213ENST00000593254 OR1D2P34982 312 aa14.38□□□□□ -0.11
H3F3B-213ENST00000593254 MATR3P43243 847 aaKnown RBP eCLIP14.38□□□□□ -0.11
H3F3B-213ENST00000593254 LIG4P49917 911 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms