RNA–Protein interactions for RNA: ENST00000592905.5

ERCC1-217, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-217ENST00000592905 XPOTO43592 962 aaKnown RBP16.41■□□□□ 0.22
ERCC1-217ENST00000592905 RHOBTB3O94955 611 aa16.41■□□□□ 0.22
ERCC1-217ENST00000592905 IL18RAPO95256 599 aa16.41■□□□□ 0.22
ERCC1-217ENST00000592905 ADH1AP07327 375 aa16.41■□□□□ 0.22
ERCC1-217ENST00000592905 SRGAP2BP0DMP2 458 aa16.41■□□□□ 0.22
ERCC1-217ENST00000592905 TFAMQ00059 246 aaKnown RBP16.41■□□□□ 0.22
ERCC1-217ENST00000592905 RARS2Q5T160 578 aaKnown RBP16.41■□□□□ 0.22
ERCC1-217ENST00000592905 LMBRD2Q68DH5 695 aaPredicted RBP16.41■□□□□ 0.22
ERCC1-217ENST00000592905 SCARA3Q6AZY7 606 aa16.41■□□□□ 0.22
ERCC1-217ENST00000592905 HS2ST1Q7LGA3 356 aa16.41■□□□□ 0.22
ERCC1-217ENST00000592905 PPFIBP1Q86W92 1011 aa16.41■□□□□ 0.22
ERCC1-217ENST00000592905 PIK3R5Q8WYR1 880 aa16.41■□□□□ 0.22
ERCC1-217ENST00000592905 CCDC47Q96A33 483 aaKnown RBP16.41■□□□□ 0.22
ERCC1-217ENST00000592905 FBXL18Q96ME1 805 aa16.41■□□□□ 0.22
ERCC1-217ENST00000592905 S1PR5Q9H228 398 aa16.41■□□□□ 0.22
ERCC1-217ENST00000592905 TSHZ2Q9NRE2 1034 aa16.41■□□□□ 0.22
ERCC1-217ENST00000592905 DPP3Q9NY33 737 aa16.41■□□□□ 0.22
ERCC1-217ENST00000592905 DERAQ9Y315 318 aa16.41■□□□□ 0.22
ERCC1-217ENST00000592905 ZNF233A6NK53 670 aa16.4■□□□□ 0.22
ERCC1-217ENST00000592905 DLL1O00548 723 aa16.4■□□□□ 0.22
ERCC1-217ENST00000592905 PRPF40AO75400 957 aaKnown RBP16.4■□□□□ 0.22
ERCC1-217ENST00000592905 WEE2P0C1S8 567 aa16.4■□□□□ 0.22
ERCC1-217ENST00000592905 POU5F1Q01860 360 aaKnown RBP16.4■□□□□ 0.22
ERCC1-217ENST00000592905 SMAD4Q13485 552 aaKnown RBP16.4■□□□□ 0.22
ERCC1-217ENST00000592905 PUS10Q3MIT2 529 aaKnown RBP16.4■□□□□ 0.22
ERCC1-217ENST00000592905 C9orf57Q5W0N0 161 aa16.4■□□□□ 0.22
ERCC1-217ENST00000592905 RSPO2Q6UXX9 243 aaPredicted RBP16.4■□□□□ 0.22
ERCC1-217ENST00000592905 SMYD4Q8IYR2 804 aaPredicted RBP16.4■□□□□ 0.22
ERCC1-217ENST00000592905 SMRP1Q8NCR6 262 aa16.4■□□□□ 0.22
ERCC1-217ENST00000592905 TSPAN18Q96SJ8 248 aa16.4■□□□□ 0.22
ERCC1-217ENST00000592905 UHRF1Q96T88 793 aaPredicted RBP16.4■□□□□ 0.22
ERCC1-217ENST00000592905 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.4■□□□□ 0.22
ERCC1-217ENST00000592905 FNIP2Q9P278 1114 aa16.4■□□□□ 0.22
ERCC1-217ENST00000592905 C2CD2Q9Y426 696 aa16.4■□□□□ 0.22
ERCC1-217ENST00000592905 USP15Q9Y4E8 981 aaPredicted RBP16.4■□□□□ 0.22
ERCC1-217ENST00000592905 TIMM13Q9Y5L4 95 aaPredicted RBP16.4■□□□□ 0.22
ERCC1-217ENST00000592905 C2orf16Q68DN1 1984 aa16.4■□□□□ 0.22
ERCC1-217ENST00000592905 DOCK6Q96HP0 2047 aa16.4■□□□□ 0.22
ERCC1-217ENST00000592905 SPDYE4A6NLX3 237 aa16.39■□□□□ 0.21
ERCC1-217ENST00000592905 KIAA0391O15091 583 aaKnown RBP16.39■□□□□ 0.21
ERCC1-217ENST00000592905 SPTLC1O15269 473 aa16.39■□□□□ 0.21
ERCC1-217ENST00000592905 TGM5O43548 720 aa16.39■□□□□ 0.21
ERCC1-217ENST00000592905 GLUD1P00367 558 aa16.39■□□□□ 0.21
ERCC1-217ENST00000592905 OR1D2P34982 312 aa16.39■□□□□ 0.21
ERCC1-217ENST00000592905 KCNB1Q14721 858 aa16.39■□□□□ 0.21
ERCC1-217ENST00000592905 VARS2Q5ST30 1063 aaKnown RBP16.39■□□□□ 0.21
ERCC1-217ENST00000592905 TMC5Q6UXY8 1006 aa16.39■□□□□ 0.21
ERCC1-217ENST00000592905 DSTYKQ6XUX3 929 aa16.39■□□□□ 0.21
ERCC1-217ENST00000592905 XXYLT1Q8NBI6 393 aa16.39■□□□□ 0.21
ERCC1-217ENST00000592905 CCDC34Q96HJ3 373 aa16.39■□□□□ 0.21
ERCC1-217ENST00000592905 SUSD3Q96L08 255 aa16.39■□□□□ 0.21
ERCC1-217ENST00000592905 KCTD10Q9H3F6 313 aa16.39■□□□□ 0.21
ERCC1-217ENST00000592905 MAN1C1Q9NR34 630 aa16.39■□□□□ 0.21
ERCC1-217ENST00000592905 PTPRJQ12913 1337 aa16.39■□□□□ 0.21
ERCC1-217ENST00000592905 ANO9A1A5B4 782 aa16.38■□□□□ 0.21
ERCC1-217ENST00000592905 PIRO00625 290 aa16.38■□□□□ 0.21
ERCC1-217ENST00000592905 ARPP19P56211 112 aa16.38■□□□□ 0.21
ERCC1-217ENST00000592905 LILRA4P59901 499 aa16.38■□□□□ 0.21
ERCC1-217ENST00000592905 SNRPFP62306 86 aaKnown RBP16.38■□□□□ 0.21
ERCC1-217ENST00000592905 CREMQ03060 361 aa16.38■□□□□ 0.21
ERCC1-217ENST00000592905 SMAD2Q15796 467 aaKnown RBP16.38■□□□□ 0.21
ERCC1-217ENST00000592905 SNRNP35Q16560 246 aaKnown RBP16.38■□□□□ 0.21
ERCC1-217ENST00000592905 ISM2Q6H9L7 571 aa16.38■□□□□ 0.21
ERCC1-217ENST00000592905 LILRA6Q6PI73 481 aa16.38■□□□□ 0.21
ERCC1-217ENST00000592905 GPR65Q8IYL9 337 aa16.38■□□□□ 0.21
ERCC1-217ENST00000592905 TIGD1Q96MW7 591 aa16.38■□□□□ 0.21
ERCC1-217ENST00000592905 IPO9Q96P70 1041 aaKnown RBP16.38■□□□□ 0.21
ERCC1-217ENST00000592905 POP1Q99575 1024 aaKnown RBP16.38■□□□□ 0.21
ERCC1-217ENST00000592905 MTRRQ9UBK8 725 aa16.38■□□□□ 0.21
ERCC1-217ENST00000592905 PCDHB8Q9UN66 801 aa16.38■□□□□ 0.21
ERCC1-217ENST00000592905 PCDHA5Q9Y5H7 936 aa16.38■□□□□ 0.21
ERCC1-217ENST00000592905 CDY1Q9Y6F8 540 aa16.38■□□□□ 0.21
ERCC1-217ENST00000592905 SYN3O14994 580 aa16.37■□□□□ 0.21
ERCC1-217ENST00000592905 EXOC3O60645 756 aa16.37■□□□□ 0.21
ERCC1-217ENST00000592905 KINO60870 393 aaKnown RBP16.37■□□□□ 0.21
ERCC1-217ENST00000592905 RFPL2O75678 378 aa16.37■□□□□ 0.21
ERCC1-217ENST00000592905 ITGB3P05106 788 aa16.37■□□□□ 0.21
ERCC1-217ENST00000592905 HOXB8P17481 243 aaPredicted RBP16.37■□□□□ 0.21
ERCC1-217ENST00000592905 PDXDC1Q6P996 788 aa16.37■□□□□ 0.21
ERCC1-217ENST00000592905 ANKS3Q6ZW76 656 aa16.37■□□□□ 0.21
ERCC1-217ENST00000592905 C12orf56Q8IXR9 622 aa16.37■□□□□ 0.21
ERCC1-217ENST00000592905 CSGALNACT2Q8N6G5 542 aa16.37■□□□□ 0.21
ERCC1-217ENST00000592905 C1orf127Q8N9H9 656 aa16.37■□□□□ 0.21
ERCC1-217ENST00000592905 OR5B17Q8NGF7 314 aa16.37■□□□□ 0.21
ERCC1-217ENST00000592905 CACTINQ8WUQ7 758 aaKnown RBP16.37■□□□□ 0.21
ERCC1-217ENST00000592905 CCDC127Q96BQ5 260 aa16.37■□□□□ 0.21
ERCC1-217ENST00000592905 SENP8Q96LD8 212 aa16.37■□□□□ 0.21
ERCC1-217ENST00000592905 MTMR12Q9C0I1 747 aa16.37■□□□□ 0.21
ERCC1-217ENST00000592905 KIAA1586Q9HCI6 787 aa16.37■□□□□ 0.21
ERCC1-217ENST00000592905 CD320Q9NPF0 282 aa16.37■□□□□ 0.21
ERCC1-217ENST00000592905 DZANK1Q9NVP4 752 aa16.37■□□□□ 0.21
ERCC1-217ENST00000592905 CGNQ9P2M7 1197 aaKnown RBP16.37■□□□□ 0.21
ERCC1-217ENST00000592905 AGAP1Q9UPQ3 857 aa16.37■□□□□ 0.21
ERCC1-217ENST00000592905 FAM50BQ9Y247 325 aa16.37■□□□□ 0.21
ERCC1-217ENST00000592905 M0QZQ0 153 aa16.36■□□□□ 0.21
ERCC1-217ENST00000592905 PDXKO00764 312 aa16.36■□□□□ 0.21
ERCC1-217ENST00000592905 SMC2O95347 1197 aa16.36■□□□□ 0.21
ERCC1-217ENST00000592905 KRT19P08727 400 aa16.36■□□□□ 0.21
ERCC1-217ENST00000592905 DLATP10515 647 aaKnown RBP16.36■□□□□ 0.21
ERCC1-217ENST00000592905 POLR2BP30876 1174 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms