RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 RWDD2AQ9UIY3 292 aa10.75□□□□□ -0.69
TPM4-216ENST00000592822 HIDE1A8MVS5 230 aa10.74□□□□□ -0.69
TPM4-216ENST00000592822 SPTLC1O15269 473 aa10.74□□□□□ -0.69
TPM4-216ENST00000592822 SLC16A3O15427 465 aaKnown RBP10.74□□□□□ -0.69
TPM4-216ENST00000592822 LILRB3O75022 631 aa10.74□□□□□ -0.69
TPM4-216ENST00000592822 CXCL14O95715 111 aa10.74□□□□□ -0.69
TPM4-216ENST00000592822 SOD2P04179 222 aa10.74□□□□□ -0.69
TPM4-216ENST00000592822 ITGB3P05106 788 aa10.74□□□□□ -0.69
TPM4-216ENST00000592822 TMEM191BP0C7N4 346 aa10.74□□□□□ -0.69
TPM4-216ENST00000592822 CTSAP10619 480 aa10.74□□□□□ -0.69
TPM4-216ENST00000592822 TNNI1P19237 187 aa10.74□□□□□ -0.69
TPM4-216ENST00000592822 POLR2BP30876 1174 aaKnown RBP10.74□□□□□ -0.69
TPM4-216ENST00000592822 BRCC3P46736 316 aa10.74□□□□□ -0.69
TPM4-216ENST00000592822 AARSP49588 968 aaKnown RBP eCLIP10.74□□□□□ -0.69
TPM4-216ENST00000592822 VAMP7P51809 220 aa10.74□□□□□ -0.69
TPM4-216ENST00000592822 NFKBIBQ15653 356 aa10.74□□□□□ -0.69
TPM4-216ENST00000592822 TIGD5Q53EQ6 642 aa10.74□□□□□ -0.69
TPM4-216ENST00000592822 FAM171A1Q5VUB5 890 aa10.74□□□□□ -0.69
TPM4-216ENST00000592822 KIAA0319Q5VV43 1072 aa10.74□□□□□ -0.69
TPM4-216ENST00000592822 PDE12Q6L8Q7 609 aaKnown RBP10.74□□□□□ -0.69
TPM4-216ENST00000592822 SASS6Q6UVJ0 657 aa10.74□□□□□ -0.69
TPM4-216ENST00000592822 INTS8Q75QN2 995 aaKnown RBP10.74□□□□□ -0.69
TPM4-216ENST00000592822 TRAPPC11Q7Z392 1133 aa10.74□□□□□ -0.69
TPM4-216ENST00000592822 TMC7Q7Z402 723 aa10.74□□□□□ -0.69
TPM4-216ENST00000592822 FILIP1Q7Z7B0 1213 aa10.74□□□□□ -0.69
TPM4-216ENST00000592822 ADGRD2Q7Z7M1 963 aa10.74□□□□□ -0.69
TPM4-216ENST00000592822 CSGALNACT2Q8N6G5 542 aa10.74□□□□□ -0.69
TPM4-216ENST00000592822 MRPL43Q8N983 215 aaKnown RBP10.74□□□□□ -0.69
TPM4-216ENST00000592822 MICAL1Q8TDZ2 1067 aa10.74□□□□□ -0.69
TPM4-216ENST00000592822 SYAP1Q96A49 352 aaPredicted RBP10.74□□□□□ -0.69
TPM4-216ENST00000592822 ANKRD36BP1Q96IX9 119 aa10.74□□□□□ -0.69
TPM4-216ENST00000592822 CEP63Q96MT8 703 aa10.74□□□□□ -0.69
TPM4-216ENST00000592822 ENTPD7Q9NQZ7 604 aa10.74□□□□□ -0.69
TPM4-216ENST00000592822 CHST7Q9NS84 486 aa10.74□□□□□ -0.69
TPM4-216ENST00000592822 STK39Q9UEW8 545 aa10.74□□□□□ -0.69
TPM4-216ENST00000592822 ITGA11Q9UKX5 1188 aa10.74□□□□□ -0.69
TPM4-216ENST00000592822 SF3B1O75533 1304 aaKnown RBP eCLIP10.74□□□□□ -0.69
TPM4-216ENST00000592822 PRUNE2Q8WUY3 3088 aa10.73□□□□□ -0.69
TPM4-216ENST00000592822 COL6A3P12111 3177 aa10.73□□□□□ -0.69
TPM4-216ENST00000592822 C2orf71A6NGG8 1288 aa10.73□□□□□ -0.69
TPM4-216ENST00000592822 TNNC2P02585 160 aa10.73□□□□□ -0.69
TPM4-216ENST00000592822 C4BPAP04003 597 aaKnown RBP10.73□□□□□ -0.69
TPM4-216ENST00000592822 TRIM49P0CI25 452 aa10.73□□□□□ -0.69
TPM4-216ENST00000592822 TRIM49CP0CI26 452 aa10.73□□□□□ -0.69
TPM4-216ENST00000592822 EPB41P11171 864 aaKnown RBP10.73□□□□□ -0.69
TPM4-216ENST00000592822 KRT13P13646 458 aa10.73□□□□□ -0.69
TPM4-216ENST00000592822 FGFR3P22607 806 aa10.73□□□□□ -0.69
TPM4-216ENST00000592822 ERCC5P28715 1186 aaPredicted RBP10.73□□□□□ -0.69
TPM4-216ENST00000592822 TKTP29401 623 aaKnown RBP10.73□□□□□ -0.69
TPM4-216ENST00000592822 GLUD2P49448 558 aa10.73□□□□□ -0.69
TPM4-216ENST00000592822 LILRA4P59901 499 aa10.73□□□□□ -0.69
TPM4-216ENST00000592822 DSG1Q02413 1049 aa10.73□□□□□ -0.69
TPM4-216ENST00000592822 ENPEPQ07075 957 aa10.73□□□□□ -0.69
TPM4-216ENST00000592822 ELAVL2Q12926 359 aaKnown RBP10.73□□□□□ -0.69
TPM4-216ENST00000592822 BFSP1Q12934 665 aa10.73□□□□□ -0.69
TPM4-216ENST00000592822 SMC1AQ14683 1233 aaKnown RBP10.73□□□□□ -0.69
TPM4-216ENST00000592822 PTPN14Q15678 1187 aa10.73□□□□□ -0.69
TPM4-216ENST00000592822 SKOR2Q2VWA4 1001 aaPredicted RBP10.73□□□□□ -0.69
TPM4-216ENST00000592822 USP41Q3LFD5 358 aa10.73□□□□□ -0.69
TPM4-216ENST00000592822 TCEAL5Q5H9L2 206 aa10.73□□□□□ -0.69
TPM4-216ENST00000592822 RTP2Q5QGT7 225 aa10.73□□□□□ -0.69
TPM4-216ENST00000592822 PLPP4Q5VZY2 271 aa10.73□□□□□ -0.69
TPM4-216ENST00000592822 MICALL1Q8N3F8 863 aa10.73□□□□□ -0.69
TPM4-216ENST00000592822 SUSD3Q96L08 255 aa10.73□□□□□ -0.69
TPM4-216ENST00000592822 SRRTQ9BXP5 876 aaKnown RBP10.73□□□□□ -0.69
TPM4-216ENST00000592822 NSUN3Q9H649 340 aaKnown RBP10.73□□□□□ -0.69
TPM4-216ENST00000592822 NGRNQ9NPE2 291 aaKnown RBP10.73□□□□□ -0.69
TPM4-216ENST00000592822 ANO10Q9NW15 660 aa10.73□□□□□ -0.69
TPM4-216ENST00000592822 DACH1Q9UI36 760 aa10.73□□□□□ -0.69
TPM4-216ENST00000592822 AGAP1Q9UPQ3 857 aa10.73□□□□□ -0.69
TPM4-216ENST00000592822 STXBP5LQ9Y2K9 1186 aa10.73□□□□□ -0.69
TPM4-216ENST00000592822 NUB1Q9Y5A7 615 aa10.73□□□□□ -0.69
TPM4-216ENST00000592822 IRAK3Q9Y616 596 aa10.73□□□□□ -0.69
TPM4-216ENST00000592822 M0QZQ0 153 aa10.72□□□□□ -0.69
TPM4-216ENST00000592822 C2CD2LO14523 706 aa10.72□□□□□ -0.69
TPM4-216ENST00000592822 IKBKBO14920 756 aa10.72□□□□□ -0.69
TPM4-216ENST00000592822 TRAPPC3O43617 180 aa10.72□□□□□ -0.69
TPM4-216ENST00000592822 CST3P01034 146 aaPredicted RBP10.72□□□□□ -0.69
TPM4-216ENST00000592822 URODP06132 367 aa10.72□□□□□ -0.69
TPM4-216ENST00000592822 KRT19P08727 400 aa10.72□□□□□ -0.69
TPM4-216ENST00000592822 TAF6P49848 677 aa10.72□□□□□ -0.69
TPM4-216ENST00000592822 AP3M2P53677 418 aa10.72□□□□□ -0.69
TPM4-216ENST00000592822 RBP5P82980 135 aa10.72□□□□□ -0.69
TPM4-216ENST00000592822 TYRO3Q06418 890 aa10.72□□□□□ -0.69
TPM4-216ENST00000592822 PPP3CAQ08209 521 aa10.72□□□□□ -0.69
TPM4-216ENST00000592822 CCDC85BQ15834 202 aaPredicted RBP10.72□□□□□ -0.69
TPM4-216ENST00000592822 STX1AQ16623 288 aa10.72□□□□□ -0.69
TPM4-216ENST00000592822 CT47A1Q5JQC4 288 aaPredicted RBP10.72□□□□□ -0.69
TPM4-216ENST00000592822 TDRD10Q5VZ19 366 aaKnown RBP10.72□□□□□ -0.69
TPM4-216ENST00000592822 PRSS55Q6UWB4 352 aaPredicted RBP10.72□□□□□ -0.69
TPM4-216ENST00000592822 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.72□□□□□ -0.69
TPM4-216ENST00000592822 C15orf39Q6ZRI6 1047 aa10.72□□□□□ -0.69
TPM4-216ENST00000592822 C11orf57Q6ZUT1 292 aaPredicted RBP10.72□□□□□ -0.69
TPM4-216ENST00000592822 SV2AQ7L0J3 742 aa10.72□□□□□ -0.69
TPM4-216ENST00000592822 FRMD5Q7Z6J6 570 aa10.72□□□□□ -0.69
TPM4-216ENST00000592822 CEP57Q86XR8 500 aa10.72□□□□□ -0.69
TPM4-216ENST00000592822 IRF2BP1Q8IU81 584 aa10.72□□□□□ -0.69
TPM4-216ENST00000592822 GPR65Q8IYL9 337 aa10.72□□□□□ -0.69
TPM4-216ENST00000592822 LRRC52Q8N7C0 313 aa10.72□□□□□ -0.69
TPM4-216ENST00000592822 RIN2Q8WYP3 895 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms