RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 CCDC15Q0P6D6 951 aa12.34□□□□□ -0.43
ZNF540-210ENST00000592533 BNIP1Q12981 228 aa12.34□□□□□ -0.43
ZNF540-210ENST00000592533 ACVR2BQ13705 512 aa12.34□□□□□ -0.43
ZNF540-210ENST00000592533 MPP2Q14168 576 aa12.34□□□□□ -0.43
ZNF540-210ENST00000592533 LIN9Q5TKA1 542 aa12.34□□□□□ -0.43
ZNF540-210ENST00000592533 RTKN2Q8IZC4 609 aa12.34□□□□□ -0.43
ZNF540-210ENST00000592533 ZCCHC9Q8N567 271 aaKnown RBP12.34□□□□□ -0.43
ZNF540-210ENST00000592533 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.34□□□□□ -0.43
ZNF540-210ENST00000592533 CCHCR1Q8TD31 782 aa12.34□□□□□ -0.43
ZNF540-210ENST00000592533 CPA5Q8WXQ8 436 aa12.34□□□□□ -0.43
ZNF540-210ENST00000592533 SCLT1Q96NL6 688 aa12.34□□□□□ -0.43
ZNF540-210ENST00000592533 PI4K2AQ9BTU6 479 aa12.34□□□□□ -0.43
ZNF540-210ENST00000592533 CCDC113Q9H0I3 377 aa12.34□□□□□ -0.43
ZNF540-210ENST00000592533 AGAP1Q9UPQ3 857 aa12.34□□□□□ -0.43
ZNF540-210ENST00000592533 SCINQ9Y6U3 715 aa12.34□□□□□ -0.43
ZNF540-210ENST00000592533 ATP2C2O75185 946 aa12.33□□□□□ -0.44
ZNF540-210ENST00000592533 KCNA2P16389 499 aa12.33□□□□□ -0.44
ZNF540-210ENST00000592533 CCND2P30279 289 aa12.33□□□□□ -0.44
ZNF540-210ENST00000592533 LMNB2Q03252 620 aa12.33□□□□□ -0.44
ZNF540-210ENST00000592533 MAMLD1Q13495 774 aa12.33□□□□□ -0.44
ZNF540-210ENST00000592533 TBC1D10BQ4KMP7 808 aaPredicted RBP12.33□□□□□ -0.44
ZNF540-210ENST00000592533 TMEM63BQ5T3F8 832 aa12.33□□□□□ -0.44
ZNF540-210ENST00000592533 TDRPQ86YL5 185 aa12.33□□□□□ -0.44
ZNF540-210ENST00000592533 ABRAQ8N0Z2 381 aa12.33□□□□□ -0.44
ZNF540-210ENST00000592533 DYDC1Q8WWB3 177 aa12.33□□□□□ -0.44
ZNF540-210ENST00000592533 CEP170P1Q96L14 293 aa12.33□□□□□ -0.44
ZNF540-210ENST00000592533 FAM213AQ9BRX8 229 aa12.33□□□□□ -0.44
ZNF540-210ENST00000592533 NOD2Q9HC29 1040 aa12.33□□□□□ -0.44
ZNF540-210ENST00000592533 CTNNAL1Q9UBT7 734 aa12.33□□□□□ -0.44
ZNF540-210ENST00000592533 RAD17O75943 681 aa12.33□□□□□ -0.44
ZNF540-210ENST00000592533 UBOX5O94941 541 aa12.33□□□□□ -0.44
ZNF540-210ENST00000592533 HLA-DRAP01903 254 aa12.33□□□□□ -0.44
ZNF540-210ENST00000592533 MYCLP12524 364 aaPredicted RBP12.33□□□□□ -0.44
ZNF540-210ENST00000592533 BRAFP15056 766 aa12.33□□□□□ -0.44
ZNF540-210ENST00000592533 PTPN7P35236 360 aa12.33□□□□□ -0.44
ZNF540-210ENST00000592533 NR1H3Q13133 447 aa12.33□□□□□ -0.44
ZNF540-210ENST00000592533 WDR44Q5JSH3 913 aa12.33□□□□□ -0.44
ZNF540-210ENST00000592533 ARHGEF16Q5VV41 709 aa12.33□□□□□ -0.44
ZNF540-210ENST00000592533 TDRD10Q5VZ19 366 aaKnown RBP12.33□□□□□ -0.44
ZNF540-210ENST00000592533 RNF43Q68DV7 783 aa12.33□□□□□ -0.44
ZNF540-210ENST00000592533 PPP1R21Q6ZMI0 780 aa12.33□□□□□ -0.44
ZNF540-210ENST00000592533 ARHGEF18Q6ZSZ5 1173 aa12.33□□□□□ -0.44
ZNF540-210ENST00000592533 SPATA21Q7Z572 469 aa12.33□□□□□ -0.44
ZNF540-210ENST00000592533 NLRX1Q86UT6 975 aa12.33□□□□□ -0.44
ZNF540-210ENST00000592533 CPXCR1Q8N123 301 aa12.33□□□□□ -0.44
ZNF540-210ENST00000592533 GRAMD1AQ96CP6 724 aa12.33□□□□□ -0.44
ZNF540-210ENST00000592533 OSBPL8Q9BZF1 889 aa12.33□□□□□ -0.44
ZNF540-210ENST00000592533 ATP6V0A4Q9HBG4 840 aa12.33□□□□□ -0.44
ZNF540-210ENST00000592533 UBN1Q9NPG3 1134 aa12.33□□□□□ -0.44
ZNF540-210ENST00000592533 VNN1O95497 513 aa12.33□□□□□ -0.44
ZNF540-210ENST00000592533 CETPP11597 493 aa12.33□□□□□ -0.44
ZNF540-210ENST00000592533 SKIV2L2P42285 1042 aaKnown RBP12.33□□□□□ -0.44
ZNF540-210ENST00000592533 IRX3P78415 501 aaPredicted RBP12.33□□□□□ -0.44
ZNF540-210ENST00000592533 CCDC77Q9BR77 488 aa12.33□□□□□ -0.44
ZNF540-210ENST00000592533 RXFP1Q9HBX9 757 aa12.33□□□□□ -0.44
ZNF540-210ENST00000592533 GABBR1Q9UBS5 961 aa12.33□□□□□ -0.44
ZNF540-210ENST00000592533 MAGEB2O15479 319 aa12.32□□□□□ -0.44
ZNF540-210ENST00000592533 CALCAP01258 141 aa12.32□□□□□ -0.44
ZNF540-210ENST00000592533 NQO1P15559 274 aaKnown RBP12.32□□□□□ -0.44
ZNF540-210ENST00000592533 DSG3P32926 999 aa12.32□□□□□ -0.44
ZNF540-210ENST00000592533 TAS2R40P59535 323 aa12.32□□□□□ -0.44
ZNF540-210ENST00000592533 STRN3Q13033 797 aa12.32□□□□□ -0.44
ZNF540-210ENST00000592533 CUL2Q13617 745 aa12.32□□□□□ -0.44
ZNF540-210ENST00000592533 LRRC14Q15048 493 aa12.32□□□□□ -0.44
ZNF540-210ENST00000592533 MTFR1Q15390 333 aa12.32□□□□□ -0.44
ZNF540-210ENST00000592533 IZUMO3Q5VZ72 239 aa12.32□□□□□ -0.44
ZNF540-210ENST00000592533 ANKS1BQ7Z6G8 1248 aa12.32□□□□□ -0.44
ZNF540-210ENST00000592533 CYP4X1Q8N118 509 aa12.32□□□□□ -0.44
ZNF540-210ENST00000592533 MAML1Q92585 1016 aa12.32□□□□□ -0.44
ZNF540-210ENST00000592533 MAF1Q9H063 256 aa12.32□□□□□ -0.44
ZNF540-210ENST00000592533 HOMER2Q9NSB8 354 aa12.32□□□□□ -0.44
ZNF540-210ENST00000592533 NAALADL1Q9UQQ1 740 aa12.32□□□□□ -0.44
ZNF540-210ENST00000592533 SSC5DA1L4H1 1573 aa12.32□□□□□ -0.44
ZNF540-210ENST00000592533 A0A1B0GUA9 196 aa12.32□□□□□ -0.44
ZNF540-210ENST00000592533 TESPA1A2RU30 521 aaPredicted RBP12.32□□□□□ -0.44
ZNF540-210ENST00000592533 ZBED4O75132 1171 aa12.32□□□□□ -0.44
ZNF540-210ENST00000592533 APBA3O96018 575 aa12.32□□□□□ -0.44
ZNF540-210ENST00000592533 PSAPP07602 524 aa12.32□□□□□ -0.44
ZNF540-210ENST00000592533 EZRP15311 586 aaKnown RBP12.32□□□□□ -0.44
ZNF540-210ENST00000592533 COPS2P61201 443 aa12.32□□□□□ -0.44
ZNF540-210ENST00000592533 RASA2Q15283 850 aa12.32□□□□□ -0.44
ZNF540-210ENST00000592533 LRRC38Q5VT99 294 aa12.32□□□□□ -0.44
ZNF540-210ENST00000592533 NUGGCQ68CJ6 796 aa12.32□□□□□ -0.44
ZNF540-210ENST00000592533 CGB2Q6NT52 195 aa12.32□□□□□ -0.44
ZNF540-210ENST00000592533 RGS9BPQ6ZS82 235 aa12.32□□□□□ -0.44
ZNF540-210ENST00000592533 ZNF365Q70YC5 407 aa12.32□□□□□ -0.44
ZNF540-210ENST00000592533 ASRGL1Q7L266 308 aa12.32□□□□□ -0.44
ZNF540-210ENST00000592533 IFT74Q96LB3 600 aa12.32□□□□□ -0.44
ZNF540-210ENST00000592533 CYP26B1Q9NR63 512 aa12.32□□□□□ -0.44
ZNF540-210ENST00000592533 CCNB1P14635 433 aa12.31□□□□□ -0.44
ZNF540-210ENST00000592533 TBXAS1P24557 533 aaPredicted RBP12.31□□□□□ -0.44
ZNF540-210ENST00000592533 ZNF132P52740 706 aa12.31□□□□□ -0.44
ZNF540-210ENST00000592533 SOX10P56693 466 aa12.31□□□□□ -0.44
ZNF540-210ENST00000592533 TRIP13Q15645 432 aaPredicted RBP12.31□□□□□ -0.44
ZNF540-210ENST00000592533 FAM133BQ5BKY9 247 aaKnown RBP12.31□□□□□ -0.44
ZNF540-210ENST00000592533 UBR7Q8N806 425 aa12.31□□□□□ -0.44
ZNF540-210ENST00000592533 TEPSINQ96N21 525 aa12.31□□□□□ -0.44
ZNF540-210ENST00000592533 TTC25Q96NG3 672 aa12.31□□□□□ -0.44
ZNF540-210ENST00000592533 PPCSQ9HAB8 311 aa12.31□□□□□ -0.44
ZNF540-210ENST00000592533 EBF2Q9HAK2 575 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms