RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 PDE6AP16499 860 aa5.68□□□□□ -1.5
ERCC1-216ENST00000592444 SP4Q02446 784 aa5.68□□□□□ -1.5
ERCC1-216ENST00000592444 DUOXA1Q1HG43 343 aa5.68□□□□□ -1.5
ERCC1-216ENST00000592444 CCDC96Q2M329 555 aa5.68□□□□□ -1.5
ERCC1-216ENST00000592444 USH1GQ495M9 461 aa5.68□□□□□ -1.5
ERCC1-216ENST00000592444 FAM78AQ5JUQ0 283 aa5.68□□□□□ -1.5
ERCC1-216ENST00000592444 PPM1LQ5SGD2 360 aa5.68□□□□□ -1.5
ERCC1-216ENST00000592444 SLC9C2Q5TAH2 1124 aa5.68□□□□□ -1.5
ERCC1-216ENST00000592444 ZKSCAN2Q63HK3 967 aa5.68□□□□□ -1.5
ERCC1-216ENST00000592444 TMED8Q6PL24 325 aaPredicted RBP5.68□□□□□ -1.5
ERCC1-216ENST00000592444 FAM228AQ86W67 206 aa5.68□□□□□ -1.5
ERCC1-216ENST00000592444 ERICH1Q86X53 443 aa5.68□□□□□ -1.5
ERCC1-216ENST00000592444 DAGLBQ8NCG7 672 aa5.68□□□□□ -1.5
ERCC1-216ENST00000592444 RGS22Q8NE09 1264 aa5.68□□□□□ -1.5
ERCC1-216ENST00000592444 MOCOSQ96EN8 888 aa5.68□□□□□ -1.5
ERCC1-216ENST00000592444 ZNF512BQ96KM6 892 aaPredicted RBP5.68□□□□□ -1.5
ERCC1-216ENST00000592444 CAPN10Q9HC96 672 aa5.68□□□□□ -1.5
ERCC1-216ENST00000592444 PXMP2Q9NR77 195 aa5.68□□□□□ -1.5
ERCC1-216ENST00000592444 DNMT3BQ9UBC3 853 aaKnown RBP5.68□□□□□ -1.5
ERCC1-216ENST00000592444 PILRBQ9UKJ0 227 aa5.68□□□□□ -1.5
ERCC1-216ENST00000592444 FPGT-TNNI3KV9GXZ4 949 aa5.68□□□□□ -1.5
ERCC1-216ENST00000592444 ZNF532Q9HCE3 1301 aa5.68□□□□□ -1.5
ERCC1-216ENST00000592444 PCDH15Q96QU1 1955 aa5.67□□□□□ -1.5
ERCC1-216ENST00000592444 BRINP1O60477 761 aa5.67□□□□□ -1.5
ERCC1-216ENST00000592444 XYLBO75191 536 aa5.67□□□□□ -1.5
ERCC1-216ENST00000592444 PRDM1O75626 825 aa5.67□□□□□ -1.5
ERCC1-216ENST00000592444 C1RP00736 705 aa5.67□□□□□ -1.5
ERCC1-216ENST00000592444 SERPINF2P08697 491 aa5.67□□□□□ -1.5
ERCC1-216ENST00000592444 HNRNPA1P09651 372 aaKnown RBP eCLIP5.67□□□□□ -1.5
ERCC1-216ENST00000592444 UBTFL1P0CB47 393 aaPredicted RBP5.67□□□□□ -1.5
ERCC1-216ENST00000592444 SKIP12755 728 aa5.67□□□□□ -1.5
ERCC1-216ENST00000592444 INSRRP14616 1297 aa5.67□□□□□ -1.5
ERCC1-216ENST00000592444 CEBPBP17676 345 aa5.67□□□□□ -1.5
ERCC1-216ENST00000592444 ITGB6P18564 788 aa5.67□□□□□ -1.5
ERCC1-216ENST00000592444 ITPKAP23677 461 aa5.67□□□□□ -1.5
ERCC1-216ENST00000592444 ACTN2P35609 894 aa5.67□□□□□ -1.5
ERCC1-216ENST00000592444 MAP2K3P46734 347 aa5.67□□□□□ -1.5
ERCC1-216ENST00000592444 GLUD2P49448 558 aa5.67□□□□□ -1.5
ERCC1-216ENST00000592444 MYO1EQ12965 1108 aa5.67□□□□□ -1.5
ERCC1-216ENST00000592444 MTX1Q13505 466 aa5.67□□□□□ -1.5
ERCC1-216ENST00000592444 RTP5Q14D33 572 aa5.67□□□□□ -1.5
ERCC1-216ENST00000592444 SLC5A9Q2M3M2 681 aa5.67□□□□□ -1.5
ERCC1-216ENST00000592444 DHRS13Q6UX07 377 aa5.67□□□□□ -1.5
ERCC1-216ENST00000592444 METTL7BQ6UX53 244 aa5.67□□□□□ -1.5
ERCC1-216ENST00000592444 LPCAT2Q7L5N7 544 aa5.67□□□□□ -1.5
ERCC1-216ENST00000592444 RALGPS2Q86X27 583 aaPredicted RBP5.67□□□□□ -1.5
ERCC1-216ENST00000592444 ZNF444Q8N0Y2 327 aaPredicted RBP5.67□□□□□ -1.5
ERCC1-216ENST00000592444 ZNF248Q8NDW4 579 aa5.67□□□□□ -1.5
ERCC1-216ENST00000592444 CEP76Q8TAP6 659 aa5.67□□□□□ -1.5
ERCC1-216ENST00000592444 SNRNP27Q8WVK2 155 aaKnown RBP5.67□□□□□ -1.5
ERCC1-216ENST00000592444 ESYT1Q9BSJ8 1104 aa5.67□□□□□ -1.5
ERCC1-216ENST00000592444 HERC2P3Q9BVR0 1158 aa5.67□□□□□ -1.5
ERCC1-216ENST00000592444 GPRC5CQ9NQ84 441 aa5.67□□□□□ -1.5
ERCC1-216ENST00000592444 RAB6BQ9NRW1 208 aa5.67□□□□□ -1.5
ERCC1-216ENST00000592444 TBC1D13Q9NVG8 400 aa5.67□□□□□ -1.5
ERCC1-216ENST00000592444 PCDHA2Q9Y5H9 948 aa5.67□□□□□ -1.5
ERCC1-216ENST00000592444 MED13Q9UHV7 2174 aa5.67□□□□□ -1.5
ERCC1-216ENST00000592444 HIVEP3Q5T1R4 2406 aa5.67□□□□□ -1.5
ERCC1-216ENST00000592444 CABIN1Q9Y6J0 2220 aa5.67□□□□□ -1.5
ERCC1-216ENST00000592444 TNRC6BQ9UPQ9 1833 aaKnown RBP5.67□□□□□ -1.5
ERCC1-216ENST00000592444 APCP25054 2843 aa5.66□□□□□ -1.5
ERCC1-216ENST00000592444 VWA8A3KMH1 1905 aa5.66□□□□□ -1.5
ERCC1-216ENST00000592444 VPS37CA5D8V6 355 aaPredicted RBP5.66□□□□□ -1.5
ERCC1-216ENST00000592444 RRN3P2A6NIE6 340 aa5.66□□□□□ -1.5
ERCC1-216ENST00000592444 PIK3R2O00459 728 aa5.66□□□□□ -1.5
ERCC1-216ENST00000592444 MBD4O95243 580 aa5.66□□□□□ -1.5
ERCC1-216ENST00000592444 IL2RAP01589 272 aa5.66□□□□□ -1.5
ERCC1-216ENST00000592444 THBS1P07996 1170 aa5.66□□□□□ -1.5
ERCC1-216ENST00000592444 SYPP08247 313 aa5.66□□□□□ -1.5
ERCC1-216ENST00000592444 JUPP14923 745 aa5.66□□□□□ -1.5
ERCC1-216ENST00000592444 ZSCAN20P17040 1043 aaPredicted RBP5.66□□□□□ -1.5
ERCC1-216ENST00000592444 VIPR2P41587 438 aa5.66□□□□□ -1.5
ERCC1-216ENST00000592444 CLDN6P56747 220 aa5.66□□□□□ -1.5
ERCC1-216ENST00000592444 CENPCQ03188 943 aa5.66□□□□□ -1.5
ERCC1-216ENST00000592444 AAMPQ13685 434 aa5.66□□□□□ -1.5
ERCC1-216ENST00000592444 UVSSAQ2YD98 709 aa5.66□□□□□ -1.5
ERCC1-216ENST00000592444 TBC1D25Q3MII6 688 aa5.66□□□□□ -1.5
ERCC1-216ENST00000592444 LONRF3Q496Y0 759 aa5.66□□□□□ -1.5
ERCC1-216ENST00000592444 LIN9Q5TKA1 542 aa5.66□□□□□ -1.5
ERCC1-216ENST00000592444 C1QL3Q5VWW1 255 aa5.66□□□□□ -1.5
ERCC1-216ENST00000592444 PEAR1Q5VY43 1037 aaPredicted RBP5.66□□□□□ -1.5
ERCC1-216ENST00000592444 LYSMD4Q5XG99 296 aa5.66□□□□□ -1.5
ERCC1-216ENST00000592444 BTNL9Q6UXG8 535 aa5.66□□□□□ -1.5
ERCC1-216ENST00000592444 TMPRSS12Q86WS5 348 aa5.66□□□□□ -1.5
ERCC1-216ENST00000592444 NME8Q8N427 588 aa5.66□□□□□ -1.5
ERCC1-216ENST00000592444 SPATA20Q8TB22 786 aa5.66□□□□□ -1.5
ERCC1-216ENST00000592444 BAHD1Q8TBE0 780 aaPredicted RBP5.66□□□□□ -1.5
ERCC1-216ENST00000592444 DEPDC1BQ8WUY9 529 aa5.66□□□□□ -1.5
ERCC1-216ENST00000592444 TRAPPC12Q8WVT3 735 aa5.66□□□□□ -1.5
ERCC1-216ENST00000592444 B3GALT6Q96L58 329 aa5.66□□□□□ -1.5
ERCC1-216ENST00000592444 MBOAT7Q96N66 472 aa5.66□□□□□ -1.5
ERCC1-216ENST00000592444 ASB16Q96NS5 453 aa5.66□□□□□ -1.5
ERCC1-216ENST00000592444 PNMA5Q96PV4 448 aa5.66□□□□□ -1.5
ERCC1-216ENST00000592444 PPP1R16BQ96T49 567 aa5.66□□□□□ -1.5
ERCC1-216ENST00000592444 OSMRQ99650 979 aa5.66□□□□□ -1.5
ERCC1-216ENST00000592444 MEIS3Q99687 375 aa5.66□□□□□ -1.5
ERCC1-216ENST00000592444 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.66□□□□□ -1.5
ERCC1-216ENST00000592444 OXCT2Q9BYC2 517 aaPredicted RBP5.66□□□□□ -1.5
ERCC1-216ENST00000592444 INPP5FQ9Y2H2 1132 aa5.66□□□□□ -1.5
ERCC1-216ENST00000592444 HRH3Q9Y5N1 445 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms