RNA–Protein interactions for RNA: ENST00000591650.1

AP3D1-211, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 1 (best)

Gene AP3D1, Length 1,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-211ENST00000591650 TRANK1O15050 2925 aa18.66■□□□□ 0.58
AP3D1-211ENST00000591650 ANO9A1A5B4 782 aa18.66■□□□□ 0.58
AP3D1-211ENST00000591650 NRP1O14786 923 aa18.66■□□□□ 0.58
AP3D1-211ENST00000591650 VNN1O95497 513 aa18.66■□□□□ 0.58
AP3D1-211ENST00000591650 PRKCSHP14314 528 aaPredicted RBP18.66■□□□□ 0.58
AP3D1-211ENST00000591650 CTNNB1P35222 781 aa18.66■□□□□ 0.58
AP3D1-211ENST00000591650 FMO5P49326 533 aa18.66■□□□□ 0.58
AP3D1-211ENST00000591650 AP3M2P53677 418 aa18.66■□□□□ 0.58
AP3D1-211ENST00000591650 MYL7Q01449 175 aa18.66■□□□□ 0.58
AP3D1-211ENST00000591650 MIIPQ5JXC2 388 aa18.66■□□□□ 0.58
AP3D1-211ENST00000591650 PPP2R2DQ66LE6 453 aa18.66■□□□□ 0.58
AP3D1-211ENST00000591650 APTXQ7Z2E3 356 aaKnown RBP18.66■□□□□ 0.58
AP3D1-211ENST00000591650 PIRO00625 290 aa18.65■□□□□ 0.58
AP3D1-211ENST00000591650 STX10O60499 249 aa18.65■□□□□ 0.58
AP3D1-211ENST00000591650 AFPP02771 609 aaKnown RBP18.65■□□□□ 0.58
AP3D1-211ENST00000591650 KRT19P08727 400 aa18.65■□□□□ 0.58
AP3D1-211ENST00000591650 GTF2H1P32780 548 aa18.65■□□□□ 0.58
AP3D1-211ENST00000591650 RPL9P32969 192 aaKnown RBP18.65■□□□□ 0.58
AP3D1-211ENST00000591650 KCNH2Q12809 1159 aa18.65■□□□□ 0.58
AP3D1-211ENST00000591650 KRT39Q6A163 491 aa18.65■□□□□ 0.58
AP3D1-211ENST00000591650 CD300LGQ6UXG3 332 aa18.65■□□□□ 0.58
AP3D1-211ENST00000591650 SLC39A11Q8N1S5 342 aa18.65■□□□□ 0.58
AP3D1-211ENST00000591650 TAS1R2Q8TE23 839 aa18.65■□□□□ 0.58
AP3D1-211ENST00000591650 ELMO3Q96BJ8 720 aa18.65■□□□□ 0.58
AP3D1-211ENST00000591650 ANP32EQ9BTT0 268 aa18.65■□□□□ 0.58
AP3D1-211ENST00000591650 RBSNQ9H1K0 784 aa18.65■□□□□ 0.58
AP3D1-211ENST00000591650 LIMA1Q9UHB6 759 aaKnown RBP18.65■□□□□ 0.58
AP3D1-211ENST00000591650 AGAP1Q9UPQ3 857 aa18.65■□□□□ 0.58
AP3D1-211ENST00000591650 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.65■□□□□ 0.58
AP3D1-211ENST00000591650 GOLGA6L19H0YKK7 550 aa18.64■□□□□ 0.57
AP3D1-211ENST00000591650 HLA-DRAP01903 254 aa18.64■□□□□ 0.57
AP3D1-211ENST00000591650 PIK3CAP42336 1068 aa18.64■□□□□ 0.57
AP3D1-211ENST00000591650 COPB1P53618 953 aaKnown RBP18.64■□□□□ 0.57
AP3D1-211ENST00000591650 DDX27Q96GQ7 796 aaKnown RBP18.64■□□□□ 0.57
AP3D1-211ENST00000591650 FAN1Q9Y2M0 1017 aa18.64■□□□□ 0.57
AP3D1-211ENST00000591650 CDH23Q9H251 3354 aa18.63■□□□□ 0.57
AP3D1-211ENST00000591650 TMEM189-UBE2V1I3L0A0 370 aa18.63■□□□□ 0.57
AP3D1-211ENST00000591650 SPTLC1O15269 473 aa18.63■□□□□ 0.57
AP3D1-211ENST00000591650 PHACTR2O75167 634 aa18.63■□□□□ 0.57
AP3D1-211ENST00000591650 LRRN2O75325 713 aa18.63■□□□□ 0.57
AP3D1-211ENST00000591650 B3GAT3O94766 335 aa18.63■□□□□ 0.57
AP3D1-211ENST00000591650 CDK11BP21127 795 aaKnown RBP18.63■□□□□ 0.57
AP3D1-211ENST00000591650 BMPR1AP36894 532 aa18.63■□□□□ 0.57
AP3D1-211ENST00000591650 ALDH7A1P49419 539 aaKnown RBP18.63■□□□□ 0.57
AP3D1-211ENST00000591650 FXR1P51114 621 aaKnown RBP eCLIP18.63■□□□□ 0.578e-6■■■□□ 16.6
AP3D1-211ENST00000591650 NCOA4Q13772 614 aa18.63■□□□□ 0.57
AP3D1-211ENST00000591650 VWA3BQ502W6 1294 aa18.63■□□□□ 0.57
AP3D1-211ENST00000591650 SEMA4DQ92854 862 aa18.63■□□□□ 0.57
AP3D1-211ENST00000591650 IGSF21Q96ID5 467 aa18.63■□□□□ 0.57
AP3D1-211ENST00000591650 ZNF560Q96MR9 790 aa18.63■□□□□ 0.57
AP3D1-211ENST00000591650 TGS1Q96RS0 853 aaKnown RBP18.63■□□□□ 0.57
AP3D1-211ENST00000591650 VN1R3Q9BXE9 311 aa18.63■□□□□ 0.57
AP3D1-211ENST00000591650 TTYH1Q9H313 450 aaPredicted RBP18.63■□□□□ 0.57
AP3D1-211ENST00000591650 CERS4Q9HA82 394 aa18.63■□□□□ 0.57
AP3D1-211ENST00000591650 SLC28A3Q9HAS3 691 aa18.63■□□□□ 0.57
AP3D1-211ENST00000591650 AAASQ9NRG9 546 aa18.63■□□□□ 0.57
AP3D1-211ENST00000591650 ADAM28Q9UKQ2 775 aa18.63■□□□□ 0.57
AP3D1-211ENST00000591650 PCDHB12Q9Y5F1 795 aa18.63■□□□□ 0.57
AP3D1-211ENST00000591650 I3L4J1 428 aa18.62■□□□□ 0.57
AP3D1-211ENST00000591650 N4BP1O75113 896 aaKnown RBP18.62■□□□□ 0.57
AP3D1-211ENST00000591650 CST3P01034 146 aaPredicted RBP18.62■□□□□ 0.57
AP3D1-211ENST00000591650 ALDH2P05091 517 aa18.62■□□□□ 0.57
AP3D1-211ENST00000591650 PPM1AP35813 382 aa18.62■□□□□ 0.57
AP3D1-211ENST00000591650 BRCC3P46736 316 aa18.62■□□□□ 0.57
AP3D1-211ENST00000591650 MYL6P60660 151 aa18.62■□□□□ 0.57
AP3D1-211ENST00000591650 ERVK-21P61565 698 aa18.62■□□□□ 0.57
AP3D1-211ENST00000591650 TPM4P67936 248 aa18.62■□□□□ 0.57
AP3D1-211ENST00000591650 RBP5P82980 135 aa18.62■□□□□ 0.57
AP3D1-211ENST00000591650 EPC2Q52LR7 807 aa18.62■□□□□ 0.57
AP3D1-211ENST00000591650 LRRC52Q8N7C0 313 aa18.62■□□□□ 0.57
AP3D1-211ENST00000591650 KLHL23Q8NBE8 558 aa18.62■□□□□ 0.57
AP3D1-211ENST00000591650 ANKRD20A12PQ8NF67 263 aa18.62■□□□□ 0.57
AP3D1-211ENST00000591650 XYLT2Q9H1B5 865 aa18.62■□□□□ 0.57
AP3D1-211ENST00000591650 VPS16Q9H269 839 aa18.62■□□□□ 0.57
AP3D1-211ENST00000591650 NDST4Q9H3R1 872 aa18.62■□□□□ 0.57
AP3D1-211ENST00000591650 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.62■□□□□ 0.573e-6■■■■■ 101.8
AP3D1-211ENST00000591650 SPG21Q9NZD8 308 aa18.62■□□□□ 0.57
AP3D1-211ENST00000591650 RWDD3Q9Y3V2 267 aa18.62■□□□□ 0.57
AP3D1-211ENST00000591650 EPOPA6NHQ4 379 aa18.61■□□□□ 0.57
AP3D1-211ENST00000591650 PES1O00541 588 aaKnown RBP18.61■□□□□ 0.57
AP3D1-211ENST00000591650 TAF6P49848 677 aa18.61■□□□□ 0.57
AP3D1-211ENST00000591650 TRPC3Q13507 836 aa18.61■□□□□ 0.57
AP3D1-211ENST00000591650 DCLRE1AQ6PJP8 1040 aa18.61■□□□□ 0.57
AP3D1-211ENST00000591650 FBXL13Q8NEE6 735 aa18.61■□□□□ 0.57
AP3D1-211ENST00000591650 HPDLQ96IR7 371 aa18.61■□□□□ 0.57
AP3D1-211ENST00000591650 PI4K2AQ9BTU6 479 aa18.61■□□□□ 0.57
AP3D1-211ENST00000591650 COLEC11Q9BWP8 271 aa18.61■□□□□ 0.57
AP3D1-211ENST00000591650 COQ4Q9Y3A0 265 aa18.61■□□□□ 0.57
AP3D1-211ENST00000591650 SZT2Q5T011 3432 aa18.6■□□□□ 0.57
AP3D1-211ENST00000591650 LGALS16A8MUM7 142 aa18.6■□□□□ 0.57
AP3D1-211ENST00000591650 C5orf67F2Z3F1 127 aa18.6■□□□□ 0.57
AP3D1-211ENST00000591650 PMM2O15305 246 aa18.6■□□□□ 0.57
AP3D1-211ENST00000591650 FGF18O76093 207 aa18.6■□□□□ 0.57
AP3D1-211ENST00000591650 AARSP49588 968 aaKnown RBP eCLIP18.6■□□□□ 0.57
AP3D1-211ENST00000591650 LILRA4P59901 499 aa18.6■□□□□ 0.57
AP3D1-211ENST00000591650 ZNF699Q32M78 642 aa18.6■□□□□ 0.57
AP3D1-211ENST00000591650 SPOPLQ6IQ16 392 aa18.6■□□□□ 0.57
AP3D1-211ENST00000591650 FUT10Q6P4F1 479 aa18.6■□□□□ 0.57
AP3D1-211ENST00000591650 FBXO22Q8NEZ5 403 aa18.6■□□□□ 0.57
AP3D1-211ENST00000591650 TMEM169Q96HH4 297 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms