RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 VPS36Q86VN1 386 aa12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 FAM20CQ8IXL6 584 aa12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 GIPC3Q8TF64 312 aa12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 PLVAPQ9BX97 442 aa12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 MYH14Q7Z406 1995 aaKnown RBP12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 SH3PXD2BA1X283 911 aa12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 KRT36O76013 467 aa12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 EIF3BP55884 814 aaKnown RBP12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 WASHC5Q12768 1159 aa12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 DDX42Q86XP3 938 aaKnown RBP eCLIP12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 GOLM1Q8NBJ4 401 aa12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 RPGRQ92834 1020 aaKnown RBP12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 ANKRD36BP1Q96IX9 119 aa12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 RIOX1Q9H6W3 641 aa12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 USP29Q9HBJ7 922 aa12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 KRT82Q9NSB4 513 aa12.94□□□□□ -0.34
SMARCA4-217ENST00000591595 ROBO3Q96MS0 1386 aa12.93□□□□□ -0.34
SMARCA4-217ENST00000591595 GRID2IPA4D2P6 1211 aa12.93□□□□□ -0.34
SMARCA4-217ENST00000591595 TBX10O75333 385 aa12.93□□□□□ -0.34
SMARCA4-217ENST00000591595 FAM98CQ17RN3 349 aaKnown RBP12.93□□□□□ -0.34
SMARCA4-217ENST00000591595 MYLK3Q32MK0 819 aa12.93□□□□□ -0.34
SMARCA4-217ENST00000591595 ASPRV1Q53RT3 343 aa12.93□□□□□ -0.34
SMARCA4-217ENST00000591595 MEI1Q5TIA1 1274 aa12.93□□□□□ -0.34
SMARCA4-217ENST00000591595 SNRNP48Q6IEG0 339 aaKnown RBP12.93□□□□□ -0.34
SMARCA4-217ENST00000591595 TTBK2Q6IQ55 1244 aa12.93□□□□□ -0.34
SMARCA4-217ENST00000591595 C1orf228Q6PIY5 440 aa12.93□□□□□ -0.34
SMARCA4-217ENST00000591595 MCF2L2Q86YR7 1114 aa12.93□□□□□ -0.34
SMARCA4-217ENST00000591595 SPERTQ8NA61 448 aa12.93□□□□□ -0.34
SMARCA4-217ENST00000591595 USP38Q8NB14 1042 aa12.93□□□□□ -0.34
SMARCA4-217ENST00000591595 DDHD1Q8NEL9 900 aa12.93□□□□□ -0.34
SMARCA4-217ENST00000591595 PLEKHO2Q8TD55 490 aa12.93□□□□□ -0.34
SMARCA4-217ENST00000591595 DNAJC19Q96DA6 116 aa12.93□□□□□ -0.34
SMARCA4-217ENST00000591595 CEP63Q96MT8 703 aa12.93□□□□□ -0.34
SMARCA4-217ENST00000591595 C6orf203Q9P0P8 240 aaPredicted RBP12.93□□□□□ -0.34
SMARCA4-217ENST00000591595 ARMCX3Q9UH62 379 aaPredicted RBP12.93□□□□□ -0.34
SMARCA4-217ENST00000591595 PCDHB2Q9Y5E7 798 aa12.93□□□□□ -0.34
SMARCA4-217ENST00000591595 NOTOA8MTQ0 251 aa12.93□□□□□ -0.34
SMARCA4-217ENST00000591595 EIF2B2P49770 351 aaKnown RBP12.93□□□□□ -0.34
SMARCA4-217ENST00000591595 TUBA4AP68366 448 aa12.93□□□□□ -0.34
SMARCA4-217ENST00000591595 PTK2Q05397 1052 aa12.93□□□□□ -0.34
SMARCA4-217ENST00000591595 KCTD1Q719H9 257 aa12.93□□□□□ -0.34
SMARCA4-217ENST00000591595 CROCCP3Q8IVE0 287 aa12.93□□□□□ -0.34
SMARCA4-217ENST00000591595 DTX3LQ8TDB6 740 aa12.93□□□□□ -0.34
SMARCA4-217ENST00000591595 DDX47Q9H0S4 455 aaKnown RBP12.93□□□□□ -0.34
SMARCA4-217ENST00000591595 NEUROG2Q9H2A3 272 aa12.93□□□□□ -0.34
SMARCA4-217ENST00000591595 CD209Q9NNX6 404 aa12.93□□□□□ -0.34
SMARCA4-217ENST00000591595 PRKAG3Q9UGI9 489 aa12.93□□□□□ -0.34
SMARCA4-217ENST00000591595 USP17L15C9J2P7 530 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 USP17L13C9JLJ4 530 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 USP17L11C9JVI0 530 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 USP17L18D6R9N7 530 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 USP17L22D6RA61 530 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 USP17L17D6RBQ6 530 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 USP17L19D6RCP7 530 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 USP17L20D6RJB6 530 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 C6orf229H3BNL8 230 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 VILLO15195 856 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 DKC1O60832 514 aaKnown RBP eCLIP12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 SLC9A1P19634 815 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 RFC4P35249 363 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 MXI1P50539 228 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 MGAT5Q09328 741 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 USP17L24Q0WX57 530 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 LPIN1Q14693 890 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 USP17L6PQ6QN14 398 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 PEX26Q7Z412 305 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 TMC3Q7Z5M5 1100 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 TRIM59Q8IWR1 403 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 GIMAP1Q8WWP7 306 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 SYN2Q92777 582 aaPredicted RBP12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 SEZ6LQ9BYH1 1024 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 TRIM31Q9BZY9 425 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 MTMR4Q9NYA4 1195 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 HDAC9Q9UKV0 1011 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 hCG_1984214I3L0E3 225 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 MEIS1O00470 390 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 KRIT1O00522 736 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 RNASEH1O60930 286 aaKnown RBP12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 AKR1B1P15121 316 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 MARK3P27448 753 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 STAT3P40763 770 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 GRAPQ13588 217 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 EXOC3L4Q17RC7 722 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 TMEM119Q4V9L6 283 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 RNF43Q68DV7 783 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 ALKBH5Q6P6C2 394 aaKnown RBP12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 RBM44Q6ZP01 1051 aaKnown RBP12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 TAOK1Q7L7X3 1001 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 ADGRF4Q8IZF3 695 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 DCLK2Q8N568 766 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 PPP1R14CQ8TAE6 165 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 GRAPLQ8TC17 118 aaPredicted RBP12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 INPP4AQ96PE3 977 aaPredicted RBP12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 UMODL1Q5DID0 1318 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 KDM3AQ9Y4C1 1321 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 TLDC2A0PJX2 215 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 RBAK-RBAKDNI3L0D1 243 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 CTAG1AP78358 180 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 SEPT6Q14141 434 aa12.92□□□□□ -0.34
SMARCA4-217ENST00000591595 C4orf50Q6ZRC1 276 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms