RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 CD300LGQ6UXG3 332 aa13.01□□□□□ -0.33
APOC1-206ENST00000590334 APTXQ7Z2E3 356 aaKnown RBP13.01□□□□□ -0.33
APOC1-206ENST00000590334 GAS2L3Q86XJ1 694 aa13.01□□□□□ -0.33
APOC1-206ENST00000590334 TMEM130Q8N3G9 435 aa13.01□□□□□ -0.33
APOC1-206ENST00000590334 LRRC52Q8N7C0 313 aa13.01□□□□□ -0.33
APOC1-206ENST00000590334 FAM84AQ96KN4 292 aa13.01□□□□□ -0.33
APOC1-206ENST00000590334 ZNF558Q96NG5 402 aa13.01□□□□□ -0.33
APOC1-206ENST00000590334 PLVAPQ9BX97 442 aa13.01□□□□□ -0.33
APOC1-206ENST00000590334 CACNG4Q9UBN1 327 aa13.01□□□□□ -0.33
APOC1-206ENST00000590334 FAN1Q9Y2M0 1017 aa13.01□□□□□ -0.33
APOC1-206ENST00000590334 N4BP1O75113 896 aaKnown RBP13□□□□□ -0.33
APOC1-206ENST00000590334 KIF4AO95239 1232 aa13□□□□□ -0.33
APOC1-206ENST00000590334 CST3P01034 146 aaPredicted RBP13□□□□□ -0.33
APOC1-206ENST00000590334 RB1P06400 928 aa13□□□□□ -0.33
APOC1-206ENST00000590334 ATP1A3P13637 1013 aa13□□□□□ -0.33
APOC1-206ENST00000590334 CDK11BP21127 795 aaKnown RBP13□□□□□ -0.33
APOC1-206ENST00000590334 PPM1AP35813 382 aa13□□□□□ -0.33
APOC1-206ENST00000590334 PNPLA4P41247 253 aa13□□□□□ -0.33
APOC1-206ENST00000590334 AARSP49588 968 aaKnown RBP eCLIP13□□□□□ -0.33
APOC1-206ENST00000590334 MXI1P50539 228 aa13□□□□□ -0.33
APOC1-206ENST00000590334 RBP5P82980 135 aa13□□□□□ -0.33
APOC1-206ENST00000590334 VWA3BQ502W6 1294 aa13□□□□□ -0.33
APOC1-206ENST00000590334 SPOUT1Q5T280 376 aaKnown RBP13□□□□□ -0.33
APOC1-206ENST00000590334 SCARA3Q6AZY7 606 aa13□□□□□ -0.33
APOC1-206ENST00000590334 CREBRFQ8IUR6 639 aa13□□□□□ -0.33
APOC1-206ENST00000590334 SLC39A11Q8N1S5 342 aa13□□□□□ -0.33
APOC1-206ENST00000590334 C3orf58Q8NDZ4 430 aa13□□□□□ -0.33
APOC1-206ENST00000590334 ANKRD20A12PQ8NF67 263 aa13□□□□□ -0.33
APOC1-206ENST00000590334 TGS1Q96RS0 853 aaKnown RBP13□□□□□ -0.33
APOC1-206ENST00000590334 COLEC11Q9BWP8 271 aa13□□□□□ -0.33
APOC1-206ENST00000590334 NKX2-4Q9H2Z4 354 aa13□□□□□ -0.33
APOC1-206ENST00000590334 NDST4Q9H3R1 872 aa13□□□□□ -0.33
APOC1-206ENST00000590334 VRTNQ9H8Y1 702 aa13□□□□□ -0.33
APOC1-206ENST00000590334 MARCH5Q9NX47 278 aa13□□□□□ -0.33
APOC1-206ENST00000590334 SPG21Q9NZD8 308 aa13□□□□□ -0.33
APOC1-206ENST00000590334 ADAM28Q9UKQ2 775 aa13□□□□□ -0.33
APOC1-206ENST00000590334 AGAP1Q9UPQ3 857 aa13□□□□□ -0.33
APOC1-206ENST00000590334 PCDHB12Q9Y5F1 795 aa13□□□□□ -0.33
APOC1-206ENST00000590334 REV3LO60673 3130 aa12.99□□□□□ -0.33
APOC1-206ENST00000590334 GTPBP10A4D1E9 387 aaKnown RBP12.99□□□□□ -0.33
APOC1-206ENST00000590334 TULP1O00294 542 aaPredicted RBP12.99□□□□□ -0.33
APOC1-206ENST00000590334 PPEF2O14830 753 aa12.99□□□□□ -0.33
APOC1-206ENST00000590334 PHACTR2O75167 634 aa12.99□□□□□ -0.33
APOC1-206ENST00000590334 POLR2BP30876 1174 aaKnown RBP12.99□□□□□ -0.33
APOC1-206ENST00000590334 ATICP31939 592 aa12.99□□□□□ -0.33
APOC1-206ENST00000590334 PBX3P40426 434 aa12.99□□□□□ -0.33
APOC1-206ENST00000590334 COPB1P53618 953 aaKnown RBP12.99□□□□□ -0.33
APOC1-206ENST00000590334 LILRA4P59901 499 aa12.99□□□□□ -0.33
APOC1-206ENST00000590334 MYL7Q01449 175 aa12.99□□□□□ -0.33
APOC1-206ENST00000590334 PLCB3Q01970 1234 aa12.99□□□□□ -0.33
APOC1-206ENST00000590334 BIRC3Q13489 604 aa12.99□□□□□ -0.33
APOC1-206ENST00000590334 NCOA4Q13772 614 aa12.99□□□□□ -0.33
APOC1-206ENST00000590334 EPC2Q52LR7 807 aa12.99□□□□□ -0.33
APOC1-206ENST00000590334 TMEM173Q86WV6 379 aaPredicted RBP12.99□□□□□ -0.33
APOC1-206ENST00000590334 RNF168Q8IYW5 571 aaPredicted RBP12.99□□□□□ -0.33
APOC1-206ENST00000590334 FBXL13Q8NEE6 735 aa12.99□□□□□ -0.33
APOC1-206ENST00000590334 TAS1R2Q8TE23 839 aa12.99□□□□□ -0.33
APOC1-206ENST00000590334 BCL7CQ8WUZ0 217 aaPredicted RBP12.99□□□□□ -0.33
APOC1-206ENST00000590334 RABGGTAQ92696 567 aa12.99□□□□□ -0.33
APOC1-206ENST00000590334 TAF4BQ92750 862 aa12.99□□□□□ -0.33
APOC1-206ENST00000590334 TIFAQ96CG3 184 aa12.99□□□□□ -0.33
APOC1-206ENST00000590334 IGSF21Q96ID5 467 aa12.99□□□□□ -0.33
APOC1-206ENST00000590334 ZNF560Q96MR9 790 aa12.99□□□□□ -0.33
APOC1-206ENST00000590334 C17orf80Q9BSJ5 609 aa12.99□□□□□ -0.33
APOC1-206ENST00000590334 XYLT2Q9H1B5 865 aa12.99□□□□□ -0.33
APOC1-206ENST00000590334 RBSNQ9H1K0 784 aa12.99□□□□□ -0.33
APOC1-206ENST00000590334 SLC28A3Q9HAS3 691 aa12.99□□□□□ -0.33
APOC1-206ENST00000590334 STK39Q9UEW8 545 aa12.99□□□□□ -0.33
APOC1-206ENST00000590334 TMEM265A0A087WTH1 108 aa12.98□□□□□ -0.33
APOC1-206ENST00000590334 NT5C1B-RDH14C9J2C7 533 aa12.98□□□□□ -0.33
APOC1-206ENST00000590334 F8W810 466 aa12.98□□□□□ -0.33
APOC1-206ENST00000590334 B3GAT3O94766 335 aa12.98□□□□□ -0.33
APOC1-206ENST00000590334 ASS1P00966 412 aaKnown RBP12.98□□□□□ -0.33
APOC1-206ENST00000590334 HLA-DRAP01903 254 aa12.98□□□□□ -0.33
APOC1-206ENST00000590334 ITGB1P05556 798 aa12.98□□□□□ -0.33
APOC1-206ENST00000590334 TPM2P07951 284 aa12.98□□□□□ -0.33
APOC1-206ENST00000590334 KRT19P08727 400 aa12.98□□□□□ -0.33
APOC1-206ENST00000590334 IGFBP6P24592 240 aaPredicted RBP12.98□□□□□ -0.33
APOC1-206ENST00000590334 CTNNB1P35222 781 aa12.98□□□□□ -0.33
APOC1-206ENST00000590334 TAF6P49848 677 aa12.98□□□□□ -0.33
APOC1-206ENST00000590334 MYL6P60660 151 aa12.98□□□□□ -0.33
APOC1-206ENST00000590334 TRPC3Q13507 836 aa12.98□□□□□ -0.33
APOC1-206ENST00000590334 SGSM1Q2NKQ1 1148 aa12.98□□□□□ -0.33
APOC1-206ENST00000590334 SV2CQ496J9 727 aa12.98□□□□□ -0.33
APOC1-206ENST00000590334 PPP2R2DQ66LE6 453 aa12.98□□□□□ -0.33
APOC1-206ENST00000590334 RNF214Q8ND24 703 aa12.98□□□□□ -0.33
APOC1-206ENST00000590334 LMO3Q8TAP4 145 aa12.98□□□□□ -0.33
APOC1-206ENST00000590334 SEMA4DQ92854 862 aa12.98□□□□□ -0.33
APOC1-206ENST00000590334 HPDLQ96IR7 371 aa12.98□□□□□ -0.33
APOC1-206ENST00000590334 FAXDC2Q96IV6 333 aa12.98□□□□□ -0.33
APOC1-206ENST00000590334 VPS16Q9H269 839 aa12.98□□□□□ -0.33
APOC1-206ENST00000590334 MMRN2Q9H8L6 949 aa12.98□□□□□ -0.33
APOC1-206ENST00000590334 RAB20Q9NX57 234 aa12.98□□□□□ -0.33
APOC1-206ENST00000590334 GDAP2Q9NXN4 497 aa12.98□□□□□ -0.33
APOC1-206ENST00000590334 TAB2Q9NYJ8 693 aa12.98□□□□□ -0.33
APOC1-206ENST00000590334 LZTS1Q9Y250 596 aa12.98□□□□□ -0.33
APOC1-206ENST00000590334 PRG3Q9Y2Y8 225 aaPredicted RBP12.98□□□□□ -0.33
APOC1-206ENST00000590334 SF3B1O75533 1304 aaKnown RBP eCLIP12.97□□□□□ -0.33
APOC1-206ENST00000590334 LGALS16A8MUM7 142 aa12.97□□□□□ -0.33
APOC1-206ENST00000590334 KPNA7A9QM74 516 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms