RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 MTERF2Q49AM1 385 aa15.34■□□□□ 0.05
SMARCA4-214ENST00000589677 EFHC1Q5JVL4 640 aa15.34■□□□□ 0.05
SMARCA4-214ENST00000589677 IVNS1ABPQ9Y6Y0 642 aa15.34■□□□□ 0.05
SMARCA4-214ENST00000589677 UTYO14607 1347 aa15.34■□□□□ 0.05
SMARCA4-214ENST00000589677 IQSEC2Q5JU85 1478 aa15.34■□□□□ 0.05
SMARCA4-214ENST00000589677 PPARGP37231 505 aaPredicted RBP15.34■□□□□ 0.05
SMARCA4-214ENST00000589677 LRRC74BQ6ZQY2 392 aa15.34■□□□□ 0.05
SMARCA4-214ENST00000589677 PPIL6Q8IXY8 311 aa15.34■□□□□ 0.05
SMARCA4-214ENST00000589677 SPICE1Q8N0Z3 855 aa15.34■□□□□ 0.05
SMARCA4-214ENST00000589677 SEPT8Q92599 483 aa15.34■□□□□ 0.05
SMARCA4-214ENST00000589677 FAM213AQ9BRX8 229 aa15.34■□□□□ 0.05
SMARCA4-214ENST00000589677 BTBD10Q9BSF8 475 aa15.34■□□□□ 0.05
SMARCA4-214ENST00000589677 UNC45AQ9H3U1 944 aa15.34■□□□□ 0.05
SMARCA4-214ENST00000589677 DCP1AQ9NPI6 582 aaPredicted RBP15.34■□□□□ 0.05
SMARCA4-214ENST00000589677 MCM8Q9UJA3 840 aa15.34■□□□□ 0.05
SMARCA4-214ENST00000589677 ADGRB3O60242 1522 aa15.34■□□□□ 0.05
SMARCA4-214ENST00000589677 LMTK2Q8IWU2 1503 aa15.34■□□□□ 0.05
SMARCA4-214ENST00000589677 CYP2D6P10635 497 aa15.33■□□□□ 0.05
SMARCA4-214ENST00000589677 HOXA13P31271 388 aaPredicted RBP15.33■□□□□ 0.05
SMARCA4-214ENST00000589677 RFC5P40937 340 aa15.33■□□□□ 0.05
SMARCA4-214ENST00000589677 OVGP1Q12889 678 aa15.33■□□□□ 0.05
SMARCA4-214ENST00000589677 ZNF394Q53GI3 561 aa15.33■□□□□ 0.05
SMARCA4-214ENST00000589677 FAM160B2Q86V87 743 aa15.33■□□□□ 0.05
SMARCA4-214ENST00000589677 ZNF786Q8N393 782 aa15.33■□□□□ 0.05
SMARCA4-214ENST00000589677 PGM2Q96G03 612 aa15.33■□□□□ 0.05
SMARCA4-214ENST00000589677 SLC12A6Q9UHW9 1150 aa15.33■□□□□ 0.05
SMARCA4-214ENST00000589677 HPS5Q9UPZ3 1129 aa15.33■□□□□ 0.05
SMARCA4-214ENST00000589677 MYO3BQ8WXR4 1341 aa15.33■□□□□ 0.05
SMARCA4-214ENST00000589677 MADDQ8WXG6 1647 aa15.33■□□□□ 0.05
SMARCA4-214ENST00000589677 LOC100653049A0A140TA62 436 aa15.33■□□□□ 0.04
SMARCA4-214ENST00000589677 A0A1B0GW55 424 aa15.33■□□□□ 0.04
SMARCA4-214ENST00000589677 NEMP1O14524 444 aa15.33■□□□□ 0.04
SMARCA4-214ENST00000589677 KRT34O76011 436 aa15.33■□□□□ 0.04
SMARCA4-214ENST00000589677 DUX4L2P0CJ85 424 aa15.33■□□□□ 0.04
SMARCA4-214ENST00000589677 DUX4L3P0CJ86 424 aa15.33■□□□□ 0.04
SMARCA4-214ENST00000589677 DUX4L4P0CJ87 422 aa15.33■□□□□ 0.04
SMARCA4-214ENST00000589677 DUX4L5P0CJ88 424 aa15.33■□□□□ 0.04
SMARCA4-214ENST00000589677 DUX4L6P0CJ89 424 aa15.33■□□□□ 0.04
SMARCA4-214ENST00000589677 DUX4L7P0CJ90 424 aa15.33■□□□□ 0.04
SMARCA4-214ENST00000589677 CYP39A1Q9NYL5 469 aa15.33■□□□□ 0.04
SMARCA4-214ENST00000589677 DUX4Q9UBX2 424 aa15.33■□□□□ 0.04
SMARCA4-214ENST00000589677 ARHGEF40Q8TER5 1519 aa15.33■□□□□ 0.04
SMARCA4-214ENST00000589677 A0A087X0T9 212 aa15.33■□□□□ 0.04
SMARCA4-214ENST00000589677 AP3B1O00203 1094 aa15.33■□□□□ 0.04
SMARCA4-214ENST00000589677 SLC16A4O15374 487 aa15.33■□□□□ 0.04
SMARCA4-214ENST00000589677 FAM58BPP0C7Q3 252 aa15.33■□□□□ 0.04
SMARCA4-214ENST00000589677 FAM228BP0C875 321 aa15.33■□□□□ 0.04
SMARCA4-214ENST00000589677 BAG6P46379 1132 aa15.33■□□□□ 0.04
SMARCA4-214ENST00000589677 CDH6P55285 790 aa15.33■□□□□ 0.04
SMARCA4-214ENST00000589677 ACTR2P61160 394 aa15.33■□□□□ 0.04
SMARCA4-214ENST00000589677 PPIDQ08752 370 aaKnown RBP15.33■□□□□ 0.04
SMARCA4-214ENST00000589677 ZNF699Q32M78 642 aa15.33■□□□□ 0.04
SMARCA4-214ENST00000589677 TMPRSS6Q8IU80 811 aa15.33■□□□□ 0.04
SMARCA4-214ENST00000589677 KLF6Q99612 283 aaPredicted RBP15.33■□□□□ 0.04
SMARCA4-214ENST00000589677 MKNK1Q9BUB5 465 aa15.33■□□□□ 0.04
SMARCA4-214ENST00000589677 THRAP10827 490 aa15.33■□□□□ 0.04
SMARCA4-214ENST00000589677 AP3M2P53677 418 aa15.33■□□□□ 0.04
SMARCA4-214ENST00000589677 RNPEPL1Q9HAU8 725 aa15.33■□□□□ 0.04
SMARCA4-214ENST00000589677 SCN3BQ9NY72 215 aa15.33■□□□□ 0.04
SMARCA4-214ENST00000589677 HNRNPCL2B2RXH8 293 aa15.32■□□□□ 0.04
SMARCA4-214ENST00000589677 PJA2O43164 708 aa15.32■□□□□ 0.04
SMARCA4-214ENST00000589677 OASLQ15646 514 aaKnown RBP15.32■□□□□ 0.04
SMARCA4-214ENST00000589677 TATDN2Q93075 761 aa15.32■□□□□ 0.04
SMARCA4-214ENST00000589677 MMADHCQ9H3L0 296 aaPredicted RBP15.32■□□□□ 0.04
SMARCA4-214ENST00000589677 CDC42EP4Q9H3Q1 356 aaKnown RBP15.32■□□□□ 0.04
SMARCA4-214ENST00000589677 SAR1AQ9NR31 198 aa15.32■□□□□ 0.04
SMARCA4-214ENST00000589677 BSDC1Q9NW68 430 aaPredicted RBP15.32■□□□□ 0.04
SMARCA4-214ENST00000589677 PIGHQ14442 188 aaPredicted RBP15.32■□□□□ 0.04
SMARCA4-214ENST00000589677 FAM81AQ8TBF8 368 aa15.32■□□□□ 0.04
SMARCA4-214ENST00000589677 FBXO25Q8TCJ0 367 aa15.32■□□□□ 0.04
SMARCA4-214ENST00000589677 TMEM117Q9H0C3 514 aa15.32■□□□□ 0.04
SMARCA4-214ENST00000589677 GOLPH3Q9H4A6 298 aa15.32■□□□□ 0.04
SMARCA4-214ENST00000589677 P4HA2O15460 535 aa15.32■□□□□ 0.04
SMARCA4-214ENST00000589677 MYL2P10916 166 aa15.32■□□□□ 0.04
SMARCA4-214ENST00000589677 RGS2P41220 211 aa15.32■□□□□ 0.04
SMARCA4-214ENST00000589677 DCTN2Q13561 401 aaKnown RBP15.32■□□□□ 0.04
SMARCA4-214ENST00000589677 TTMPQ5BVD1 217 aa15.32■□□□□ 0.04
SMARCA4-214ENST00000589677 TMC3Q7Z5M5 1100 aa15.32■□□□□ 0.04
SMARCA4-214ENST00000589677 LRRC6Q86X45 466 aa15.32■□□□□ 0.04
SMARCA4-214ENST00000589677 DDIASQ8IXT1 998 aa15.32■□□□□ 0.04
SMARCA4-214ENST00000589677 TUFT1Q9NNX1 390 aa15.32■□□□□ 0.04
SMARCA4-214ENST00000589677 TM9SF1O15321 606 aa15.32■□□□□ 0.04
SMARCA4-214ENST00000589677 CLK1P49759 484 aaKnown RBP15.32■□□□□ 0.04
SMARCA4-214ENST00000589677 TNFAIP1Q13829 316 aa15.32■□□□□ 0.04
SMARCA4-214ENST00000589677 C1orf228Q6PIY5 440 aa15.32■□□□□ 0.04
SMARCA4-214ENST00000589677 KRT27Q7Z3Y8 459 aa15.32■□□□□ 0.04
SMARCA4-214ENST00000589677 CCDC103Q8IW40 242 aa15.32■□□□□ 0.04
SMARCA4-214ENST00000589677 GPD1LQ8N335 351 aa15.32■□□□□ 0.04
SMARCA4-214ENST00000589677 TTC39CQ8N584 583 aa15.32■□□□□ 0.04
SMARCA4-214ENST00000589677 AGAP11Q8TF27 550 aa15.32■□□□□ 0.04
SMARCA4-214ENST00000589677 TEX12Q9BXU0 123 aa15.32■□□□□ 0.04
SMARCA4-214ENST00000589677 PAK5Q9P286 719 aa15.32■□□□□ 0.04
SMARCA4-214ENST00000589677 TAF6LQ9Y6J9 622 aa15.32■□□□□ 0.04
SMARCA4-214ENST00000589677 CDC42BPGQ6DT37 1551 aa15.32■□□□□ 0.04
SMARCA4-214ENST00000589677 SETBP1Q9Y6X0 1596 aa15.32■□□□□ 0.04
SMARCA4-214ENST00000589677 USP17L15C9J2P7 530 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 USP17L13C9JLJ4 530 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 USP17L11C9JVI0 530 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 USP17L18D6R9N7 530 aa15.31■□□□□ 0.04
SMARCA4-214ENST00000589677 USP17L22D6RA61 530 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms