RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 PCDHB18PQ96TA0 734 aa10.66□□□□□ -0.7
VPS25-202ENST00000589219 GPR20Q99678 358 aa10.66□□□□□ -0.7
VPS25-202ENST00000589219 ZSWIM1Q9BR11 485 aa10.66□□□□□ -0.7
VPS25-202ENST00000589219 SENP6Q9GZR1 1112 aaPredicted RBP10.66□□□□□ -0.7
VPS25-202ENST00000589219 WNT8AQ9H1J5 351 aa10.66□□□□□ -0.7
VPS25-202ENST00000589219 GOLPH3Q9H4A6 298 aa10.66□□□□□ -0.7
VPS25-202ENST00000589219 AVENQ9NQS1 362 aaPredicted RBP10.66□□□□□ -0.7
VPS25-202ENST00000589219 VPS18Q9P253 973 aa10.66□□□□□ -0.7
VPS25-202ENST00000589219 COG5Q9UP83 839 aa10.66□□□□□ -0.7
VPS25-202ENST00000589219 IGKV6-21A0A0C4DH24 114 aa10.65□□□□□ -0.7
VPS25-202ENST00000589219 CCDC66A2RUB6 948 aa10.65□□□□□ -0.7
VPS25-202ENST00000589219 KBTBD13C9JR72 458 aa10.65□□□□□ -0.7
VPS25-202ENST00000589219 TULP1O00294 542 aaPredicted RBP10.65□□□□□ -0.7
VPS25-202ENST00000589219 RNF40O75150 1001 aa10.65□□□□□ -0.7
VPS25-202ENST00000589219 TOM1L1O75674 476 aa10.65□□□□□ -0.7
VPS25-202ENST00000589219 C4BPAP04003 597 aaKnown RBP10.65□□□□□ -0.7
VPS25-202ENST00000589219 GLI1P08151 1106 aa10.65□□□□□ -0.7
VPS25-202ENST00000589219 MMEP08473 750 aa10.65□□□□□ -0.7
VPS25-202ENST00000589219 KRT5P13647 590 aa10.65□□□□□ -0.7
VPS25-202ENST00000589219 TNNI1P19237 187 aa10.65□□□□□ -0.7
VPS25-202ENST00000589219 PTENP60484 403 aa10.65□□□□□ -0.7
VPS25-202ENST00000589219 BIRC3Q13489 604 aa10.65□□□□□ -0.7
VPS25-202ENST00000589219 DHX34Q14147 1143 aaKnown RBP10.65□□□□□ -0.7
VPS25-202ENST00000589219 TFDP1Q14186 410 aa10.65□□□□□ -0.7
VPS25-202ENST00000589219 TTLL4Q14679 1199 aa10.65□□□□□ -0.7
VPS25-202ENST00000589219 SEL1L2Q5TEA6 688 aa10.65□□□□□ -0.7
VPS25-202ENST00000589219 TDRD10Q5VZ19 366 aaKnown RBP10.65□□□□□ -0.7
VPS25-202ENST00000589219 ACAD10Q6JQN1 1059 aa10.65□□□□□ -0.7
VPS25-202ENST00000589219 WDR49Q8IV35 697 aa10.65□□□□□ -0.7
VPS25-202ENST00000589219 KLHL7Q8IXQ5 586 aa10.65□□□□□ -0.7
VPS25-202ENST00000589219 EFCAB13Q8IY85 973 aa10.65□□□□□ -0.7
VPS25-202ENST00000589219 TDHQ8IZJ6 230 aa10.65□□□□□ -0.7
VPS25-202ENST00000589219 CASKIN2Q8WXE0 1202 aa10.65□□□□□ -0.7
VPS25-202ENST00000589219 DDX1Q92499 740 aaKnown RBP10.65□□□□□ -0.7
VPS25-202ENST00000589219 RNPC3Q96LT9 517 aaKnown RBP10.65□□□□□ -0.7
VPS25-202ENST00000589219 POP1Q99575 1024 aaKnown RBP10.65□□□□□ -0.7
VPS25-202ENST00000589219 LBHD1Q9BQE6 289 aaPredicted RBP10.65□□□□□ -0.7
VPS25-202ENST00000589219 TARS2Q9BW92 718 aaKnown RBP10.65□□□□□ -0.7
VPS25-202ENST00000589219 IMPG2Q9BZV3 1241 aa10.65□□□□□ -0.7
VPS25-202ENST00000589219 UBE2OQ9C0C9 1292 aaKnown RBP10.65□□□□□ -0.7
VPS25-202ENST00000589219 CCDC113Q9H0I3 377 aa10.65□□□□□ -0.7
VPS25-202ENST00000589219 RAB17Q9H0T7 212 aa10.65□□□□□ -0.7
VPS25-202ENST00000589219 EPB41L5Q9HCM4 733 aa10.65□□□□□ -0.7
VPS25-202ENST00000589219 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.65□□□□□ -0.7
VPS25-202ENST00000589219 ANKFY1Q9P2R3 1169 aa10.65□□□□□ -0.7
VPS25-202ENST00000589219 PRKAG2Q9UGJ0 569 aa10.65□□□□□ -0.7
VPS25-202ENST00000589219 FAN1Q9Y2M0 1017 aa10.65□□□□□ -0.7
VPS25-202ENST00000589219 PCDHB2Q9Y5E7 798 aa10.65□□□□□ -0.7
VPS25-202ENST00000589219 CNTNAP2Q9UHC6 1331 aa10.64□□□□□ -0.71
VPS25-202ENST00000589219 FAM187AA6NFU0 413 aa10.64□□□□□ -0.71
VPS25-202ENST00000589219 HBP1O60381 514 aa10.64□□□□□ -0.71
VPS25-202ENST00000589219 ARIH2O95376 493 aa10.64□□□□□ -0.71
VPS25-202ENST00000589219 FGGP02679 453 aa10.64□□□□□ -0.71
VPS25-202ENST00000589219 PRKCBP05771 671 aa10.64□□□□□ -0.71
VPS25-202ENST00000589219 CLTAP09496 248 aa10.64□□□□□ -0.71
VPS25-202ENST00000589219 GBP1P32455 592 aa10.64□□□□□ -0.71
VPS25-202ENST00000589219 CTNNA1P35221 906 aaKnown RBP10.64□□□□□ -0.71
VPS25-202ENST00000589219 CUL2Q13617 745 aa10.64□□□□□ -0.71
VPS25-202ENST00000589219 LRIT3Q3SXY7 679 aa10.64□□□□□ -0.71
VPS25-202ENST00000589219 CCDC62Q6P9F0 684 aa10.64□□□□□ -0.71
VPS25-202ENST00000589219 CRELD2Q6UXH1 353 aaPredicted RBP10.64□□□□□ -0.71
VPS25-202ENST00000589219 DHX37Q8IY37 1157 aaKnown RBP10.64□□□□□ -0.71
VPS25-202ENST00000589219 TRPV1Q8NER1 839 aa10.64□□□□□ -0.71
VPS25-202ENST00000589219 GLG1Q92896 1179 aa10.64□□□□□ -0.71
VPS25-202ENST00000589219 LRRC45Q96CN5 670 aa10.64□□□□□ -0.71
VPS25-202ENST00000589219 MAML3Q96JK9 1138 aa10.64□□□□□ -0.71
VPS25-202ENST00000589219 SH3GL2Q99962 352 aa10.64□□□□□ -0.71
VPS25-202ENST00000589219 NUP85Q9BW27 656 aa10.64□□□□□ -0.71
VPS25-202ENST00000589219 PLVAPQ9BX97 442 aa10.64□□□□□ -0.71
VPS25-202ENST00000589219 SMARCAD1Q9H4L7 1026 aa10.64□□□□□ -0.71
VPS25-202ENST00000589219 FAM114A2Q9NRY5 505 aa10.64□□□□□ -0.71
VPS25-202ENST00000589219 RASAL2Q9UJF2 1139 aa10.64□□□□□ -0.71
VPS25-202ENST00000589219 TRPC6Q9Y210 931 aa10.64□□□□□ -0.71
VPS25-202ENST00000589219 ALG6Q9Y672 507 aa10.64□□□□□ -0.71
VPS25-202ENST00000589219 LAMA3Q16787 3333 aa10.63□□□□□ -0.71
VPS25-202ENST00000589219 MYH9P35579 1960 aaKnown RBP10.63□□□□□ -0.71
VPS25-202ENST00000589219 MYH10P35580 1976 aa10.63□□□□□ -0.71
VPS25-202ENST00000589219 OGTO15294 1046 aa10.63□□□□□ -0.71
VPS25-202ENST00000589219 CLDN3O15551 220 aa10.63□□□□□ -0.71
VPS25-202ENST00000589219 ASAP2O43150 1006 aa10.63□□□□□ -0.71
VPS25-202ENST00000589219 SART1O43290 800 aaKnown RBP10.63□□□□□ -0.71
VPS25-202ENST00000589219 SPOPO43791 374 aa10.63□□□□□ -0.71
VPS25-202ENST00000589219 PHF2O75151 1096 aa10.63□□□□□ -0.71
VPS25-202ENST00000589219 SYF2O95926 243 aaKnown RBP10.63□□□□□ -0.71
VPS25-202ENST00000589219 UNGP13051 313 aaPredicted RBP10.63□□□□□ -0.71
VPS25-202ENST00000589219 HSPA9P38646 679 aaKnown RBP10.63□□□□□ -0.71
VPS25-202ENST00000589219 CARSP49589 748 aaKnown RBP10.63□□□□□ -0.71
VPS25-202ENST00000589219 ACOT2P49753 483 aa10.63□□□□□ -0.71
VPS25-202ENST00000589219 NOP14P78316 857 aaKnown RBP10.63□□□□□ -0.71
VPS25-202ENST00000589219 CENPCQ03188 943 aa10.63□□□□□ -0.71
VPS25-202ENST00000589219 MCL1Q07820 350 aa10.63□□□□□ -0.71
VPS25-202ENST00000589219 PPFIA1Q13136 1202 aa10.63□□□□□ -0.71
VPS25-202ENST00000589219 MTMR3Q13615 1198 aa10.63□□□□□ -0.71
VPS25-202ENST00000589219 PLCB4Q15147 1175 aa10.63□□□□□ -0.71
VPS25-202ENST00000589219 MAPK6Q16659 721 aa10.63□□□□□ -0.71
VPS25-202ENST00000589219 LY6KQ17RY6 165 aa10.63□□□□□ -0.71
VPS25-202ENST00000589219 GJC2Q5T442 439 aaPredicted RBP10.63□□□□□ -0.71
VPS25-202ENST00000589219 DCAF12L1Q5VU92 463 aa10.63□□□□□ -0.71
VPS25-202ENST00000589219 FBXO16Q8IX29 292 aaPredicted RBP10.63□□□□□ -0.71
VPS25-202ENST00000589219 SEC14L1Q92503 715 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms