RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 FBXW11Q9UKB1 542 aa10.72□□□□□ -0.69
PTPN2-208ENST00000589216 UBQLN1Q9UMX0 589 aaKnown RBP10.72□□□□□ -0.69
PTPN2-208ENST00000589216 SSX2IPQ9Y2D8 614 aa10.72□□□□□ -0.69
PTPN2-208ENST00000589216 CDY1Q9Y6F8 540 aa10.72□□□□□ -0.69
PTPN2-208ENST00000589216 A0A1W2PQ27 194 aa10.71□□□□□ -0.69
PTPN2-208ENST00000589216 A0A1W2PQ64 194 aa10.71□□□□□ -0.69
PTPN2-208ENST00000589216 A0A1W2PQD8 194 aa10.71□□□□□ -0.69
PTPN2-208ENST00000589216 FAM86C2PA6NEL3 165 aa10.71□□□□□ -0.69
PTPN2-208ENST00000589216 EIF3DO15371 548 aaKnown RBP eCLIP10.71□□□□□ -0.69
PTPN2-208ENST00000589216 TGFB1I1O43294 461 aa10.71□□□□□ -0.69
PTPN2-208ENST00000589216 GARTP22102 1010 aa10.71□□□□□ -0.69
PTPN2-208ENST00000589216 RPL9P32969 192 aaKnown RBP10.71□□□□□ -0.69
PTPN2-208ENST00000589216 OR1D2P34982 312 aa10.71□□□□□ -0.69
PTPN2-208ENST00000589216 SYKP43405 635 aa10.71□□□□□ -0.69
PTPN2-208ENST00000589216 AARSP49588 968 aaKnown RBP eCLIP10.71□□□□□ -0.69
PTPN2-208ENST00000589216 AMPD3Q01432 767 aa10.71□□□□□ -0.69
PTPN2-208ENST00000589216 ITIH3Q06033 890 aa10.71□□□□□ -0.69
PTPN2-208ENST00000589216 TMEM132DQ14C87 1099 aa10.71□□□□□ -0.69
PTPN2-208ENST00000589216 KYAT1Q16773 422 aa10.71□□□□□ -0.69
PTPN2-208ENST00000589216 SLFN12LQ6IEE8 588 aa10.71□□□□□ -0.69
PTPN2-208ENST00000589216 ARMCX5Q6P1M9 558 aa10.71□□□□□ -0.69
PTPN2-208ENST00000589216 GPR149Q86SP6 731 aa10.71□□□□□ -0.69
PTPN2-208ENST00000589216 CEP57L1Q8IYX8 460 aa10.71□□□□□ -0.69
PTPN2-208ENST00000589216 NOC3LQ8WTT2 800 aaKnown RBP10.71□□□□□ -0.69
PTPN2-208ENST00000589216 LRRC27Q9C0I9 530 aa10.71□□□□□ -0.69
PTPN2-208ENST00000589216 MUTYHQ9UIF7 546 aa10.71□□□□□ -0.69
PTPN2-208ENST00000589216 EXOC7Q9UPT5 735 aa10.71□□□□□ -0.69
PTPN2-208ENST00000589216 NUB1Q9Y5A7 615 aa10.71□□□□□ -0.69
PTPN2-208ENST00000589216 PCDHB13Q9Y5F0 798 aa10.71□□□□□ -0.69
PTPN2-208ENST00000589216 ATP6V1DQ9Y5K8 247 aa10.71□□□□□ -0.69
PTPN2-208ENST00000589216 TIMM13Q9Y5L4 95 aaPredicted RBP10.71□□□□□ -0.69
PTPN2-208ENST00000589216 UBE4BO95155 1302 aa10.7□□□□□ -0.7
PTPN2-208ENST00000589216 ANO9A1A5B4 782 aa10.7□□□□□ -0.7
PTPN2-208ENST00000589216 WDR27A2RRH5 827 aa10.7□□□□□ -0.7
PTPN2-208ENST00000589216 SPDYE4A6NLX3 237 aa10.7□□□□□ -0.7
PTPN2-208ENST00000589216 C2CD4DB7Z1M9 353 aa10.7□□□□□ -0.7
PTPN2-208ENST00000589216 TBC1D4O60343 1298 aa10.7□□□□□ -0.7
PTPN2-208ENST00000589216 N4BP1O75113 896 aaKnown RBP10.7□□□□□ -0.7
PTPN2-208ENST00000589216 CYP3A5P20815 502 aa10.7□□□□□ -0.7
PTPN2-208ENST00000589216 ROR1Q01973 937 aa10.7□□□□□ -0.7
PTPN2-208ENST00000589216 CREMQ03060 361 aa10.7□□□□□ -0.7
PTPN2-208ENST00000589216 STK4Q13043 487 aa10.7□□□□□ -0.7
PTPN2-208ENST00000589216 BMT2Q1RMZ1 405 aa10.7□□□□□ -0.7
PTPN2-208ENST00000589216 KMT5BQ4FZB7 885 aa10.7□□□□□ -0.7
PTPN2-208ENST00000589216 C9orf57Q5W0N0 161 aa10.7□□□□□ -0.7
PTPN2-208ENST00000589216 LMBRD2Q68DH5 695 aaPredicted RBP10.7□□□□□ -0.7
PTPN2-208ENST00000589216 CES5AQ6NT32 575 aa10.7□□□□□ -0.7
PTPN2-208ENST00000589216 RNF135Q8IUD6 432 aa10.7□□□□□ -0.7
PTPN2-208ENST00000589216 CBWD2Q8IUF1 395 aa10.7□□□□□ -0.7
PTPN2-208ENST00000589216 KREMEN2Q8NCW0 462 aa10.7□□□□□ -0.7
PTPN2-208ENST00000589216 CXorf38Q8TB03 319 aa10.7□□□□□ -0.7
PTPN2-208ENST00000589216 ZNF507Q8TCN5 953 aa10.7□□□□□ -0.7
PTPN2-208ENST00000589216 POP1Q99575 1024 aaKnown RBP10.7□□□□□ -0.7
PTPN2-208ENST00000589216 PDE11AQ9HCR9 933 aa10.7□□□□□ -0.7
PTPN2-208ENST00000589216 TSHZ2Q9NRE2 1034 aa10.7□□□□□ -0.7
PTPN2-208ENST00000589216 AGPAT3Q9NRZ7 376 aa10.7□□□□□ -0.7
PTPN2-208ENST00000589216 RBAKQ9NYW8 714 aaPredicted RBP10.7□□□□□ -0.7
PTPN2-208ENST00000589216 HSPBP1Q9NZL4 362 aa10.7□□□□□ -0.7
PTPN2-208ENST00000589216 FBXL5Q9UKA1 691 aa10.7□□□□□ -0.7
PTPN2-208ENST00000589216 MYO10Q9HD67 2058 aa10.7□□□□□ -0.7
PTPN2-208ENST00000589216 CLUHO75153 1309 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 CCDC195A0A1B0GUA6 201 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 PVALEFA0A1B0GWK0 134 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 M0QZQ0 153 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 SYN3O14994 580 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 TRAPPC3O43617 180 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 EXTL3O43909 919 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 ZMYND10O75800 440 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 PAPLNO95428 1278 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 VNN2O95498 520 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 C8AP07357 584 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 OR4Q2P0C623 313 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 MTHFRP42898 656 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 CYP2J2P51589 502 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 NTHL1P78549 312 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 NUCB2P80303 420 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 TFAMQ00059 246 aaKnown RBP10.69□□□□□ -0.7
PTPN2-208ENST00000589216 DPYDQ12882 1025 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 RAB33AQ14088 237 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 MRPL58Q14197 206 aaKnown RBP10.69□□□□□ -0.7
PTPN2-208ENST00000589216 POSTNQ15063 836 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 KRBA2Q6ZNG9 492 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 C15orf39Q6ZRI6 1047 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 ANKS3Q6ZW76 656 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 CD302Q8IX05 232 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 GPD1LQ8N335 351 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 C1orf127Q8N9H9 656 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 BEST2Q8NFU1 509 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 CMASQ8NFW8 434 aaPredicted RBP10.69□□□□□ -0.7
PTPN2-208ENST00000589216 SLC7A14Q8TBB6 771 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 SMG7Q92540 1137 aaKnown RBP10.69□□□□□ -0.7
PTPN2-208ENST00000589216 RIPOR3Q96MK2 946 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 NECTIN4Q96NY8 510 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 PYM1Q9BRP8 204 aaKnown RBP10.69□□□□□ -0.7
PTPN2-208ENST00000589216 MTMR12Q9C0I1 747 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 GZF1Q9H116 711 aaPredicted RBP10.69□□□□□ -0.7
PTPN2-208ENST00000589216 SMOC2Q9H3U7 446 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 ASB7Q9H672 318 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 TMEM206Q9H813 350 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 EXOC1Q9NV70 894 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms