RNA–Protein interactions for RNA: ENST00000588090.5

CIRBP-216, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 3 BASIC

Gene CIRBP, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-216ENST00000588090 DSG1Q02413 1049 aa25.3■■□□□ 1.64
CIRBP-216ENST00000588090 PTPN14Q15678 1187 aa25.3■■□□□ 1.64
CIRBP-216ENST00000588090 TCEAL5Q5H9L2 206 aa25.3■■□□□ 1.64
CIRBP-216ENST00000588090 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.3■■□□□ 1.64
CIRBP-216ENST00000588090 INTS8Q75QN2 995 aaKnown RBP25.3■■□□□ 1.64
CIRBP-216ENST00000588090 TAS1R1Q7RTX1 841 aa25.3■■□□□ 1.64
CIRBP-216ENST00000588090 ZC3H3Q8IXZ2 948 aaKnown RBP25.3■■□□□ 1.64
CIRBP-216ENST00000588090 FAM186BQ8IYM0 893 aa25.3■■□□□ 1.64
CIRBP-216ENST00000588090 PARD3BQ8TEW8 1205 aa25.3■■□□□ 1.64
CIRBP-216ENST00000588090 PTPRJQ12913 1337 aa25.29■■□□□ 1.64
CIRBP-216ENST00000588090 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.29■■□□□ 1.64
CIRBP-216ENST00000588090 FSD2A1L4K1 749 aa25.29■■□□□ 1.64
CIRBP-216ENST00000588090 C2orf71A6NGG8 1288 aa25.29■■□□□ 1.64
CIRBP-216ENST00000588090 AP3M2P53677 418 aa25.29■■□□□ 1.64
CIRBP-216ENST00000588090 ENPEPQ07075 957 aa25.29■■□□□ 1.64
CIRBP-216ENST00000588090 CCDC85BQ15834 202 aaPredicted RBP25.29■■□□□ 1.64
CIRBP-216ENST00000588090 LMBRD2Q68DH5 695 aaPredicted RBP25.29■■□□□ 1.64
CIRBP-216ENST00000588090 TMEM130Q8N3G9 435 aa25.29■■□□□ 1.64
CIRBP-216ENST00000588090 C1orf127Q8N9H9 656 aa25.29■■□□□ 1.64
CIRBP-216ENST00000588090 TMC2Q8TDI7 906 aa25.29■■□□□ 1.64
CIRBP-216ENST00000588090 SYAP1Q96A49 352 aaPredicted RBP25.29■■□□□ 1.64
CIRBP-216ENST00000588090 ZNF560Q96MR9 790 aa25.29■■□□□ 1.64
CIRBP-216ENST00000588090 TTPALQ9BTX7 342 aa25.29■■□□□ 1.64
CIRBP-216ENST00000588090 DACH1Q9UI36 760 aa25.29■■□□□ 1.64
CIRBP-216ENST00000588090 REV3LO60673 3130 aa25.29■■□□□ 1.64
CIRBP-216ENST00000588090 HIDE1A8MVS5 230 aa25.28■■□□□ 1.64
CIRBP-216ENST00000588090 ITGB3P05106 788 aa25.28■■□□□ 1.64
CIRBP-216ENST00000588090 EPB41P11171 864 aaKnown RBP25.28■■□□□ 1.64
CIRBP-216ENST00000588090 KRT13P13646 458 aa25.28■■□□□ 1.64
CIRBP-216ENST00000588090 FGFR3P22607 806 aa25.28■■□□□ 1.64
CIRBP-216ENST00000588090 IGFBP6P24592 240 aaPredicted RBP25.28■■□□□ 1.64
CIRBP-216ENST00000588090 PNPLA4P41247 253 aa25.28■■□□□ 1.64
CIRBP-216ENST00000588090 BRCC3P46736 316 aa25.28■■□□□ 1.64
CIRBP-216ENST00000588090 AARSP49588 968 aaKnown RBP eCLIP25.28■■□□□ 1.64
CIRBP-216ENST00000588090 NLRP12P59046 1061 aa25.28■■□□□ 1.64
CIRBP-216ENST00000588090 CLDN10P78369 228 aa25.28■■□□□ 1.64
CIRBP-216ENST00000588090 KIAA0319Q5VV43 1072 aa25.28■■□□□ 1.64
CIRBP-216ENST00000588090 TTI2Q6NXR4 508 aa25.28■■□□□ 1.64
CIRBP-216ENST00000588090 PDXDC1Q6P996 788 aa25.28■■□□□ 1.64
CIRBP-216ENST00000588090 ADGRD2Q7Z7M1 963 aa25.28■■□□□ 1.64
CIRBP-216ENST00000588090 OR5B17Q8NGF7 314 aa25.28■■□□□ 1.64
CIRBP-216ENST00000588090 AUTS2Q8WXX7 1259 aa25.28■■□□□ 1.64
CIRBP-216ENST00000588090 SUSD3Q96L08 255 aa25.28■■□□□ 1.64
CIRBP-216ENST00000588090 CDCA3Q99618 268 aaPredicted RBP25.28■■□□□ 1.64
CIRBP-216ENST00000588090 TLE6Q9H808 572 aa25.28■■□□□ 1.64
CIRBP-216ENST00000588090 R3HCC1Q9Y3T6 440 aaKnown RBP25.28■■□□□ 1.64
CIRBP-216ENST00000588090 PPEF2O14830 753 aa25.28■■□□□ 1.64
CIRBP-216ENST00000588090 SYN3O14994 580 aa25.28■■□□□ 1.64
CIRBP-216ENST00000588090 SLC16A3O15427 465 aaKnown RBP25.28■■□□□ 1.64
CIRBP-216ENST00000588090 LILRA4P59901 499 aa25.28■■□□□ 1.64
CIRBP-216ENST00000588090 CREMQ03060 361 aa25.28■■□□□ 1.64
CIRBP-216ENST00000588090 CEP57Q86XR8 500 aa25.28■■□□□ 1.64
CIRBP-216ENST00000588090 CSGALNACT2Q8N6G5 542 aa25.28■■□□□ 1.64
CIRBP-216ENST00000588090 PLEKHO2Q8TD55 490 aa25.28■■□□□ 1.64
CIRBP-216ENST00000588090 PPM1EQ8WY54 764 aa25.28■■□□□ 1.64
CIRBP-216ENST00000588090 EEF2KMTQ96G04 330 aa25.28■■□□□ 1.64
CIRBP-216ENST00000588090 CEP63Q96MT8 703 aa25.28■■□□□ 1.64
CIRBP-216ENST00000588090 POP1Q99575 1024 aaKnown RBP25.28■■□□□ 1.64
CIRBP-216ENST00000588090 EMILIN2Q9BXX0 1053 aa25.28■■□□□ 1.64
CIRBP-216ENST00000588090 GZF1Q9H116 711 aaPredicted RBP25.28■■□□□ 1.64
CIRBP-216ENST00000588090 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.28■■□□□ 1.643e-7■■□□□ 13.8
CIRBP-216ENST00000588090 COL6A3P12111 3177 aa25.27■■□□□ 1.64
CIRBP-216ENST00000588090 LRRIQ3A6PVS8 624 aaPredicted RBP25.27■■□□□ 1.64
CIRBP-216ENST00000588090 I3L4J1 428 aa25.27■■□□□ 1.64
CIRBP-216ENST00000588090 C2CD2LO14523 706 aa25.27■■□□□ 1.64
CIRBP-216ENST00000588090 NCK2O43639 380 aa25.27■■□□□ 1.64
CIRBP-216ENST00000588090 LILRB3O75022 631 aa25.27■■□□□ 1.64
CIRBP-216ENST00000588090 POLR2BP30876 1174 aaKnown RBP25.27■■□□□ 1.64
CIRBP-216ENST00000588090 TAF6P49848 677 aa25.27■■□□□ 1.64
CIRBP-216ENST00000588090 RBP5P82980 135 aa25.27■■□□□ 1.64
CIRBP-216ENST00000588090 BFSP1Q12934 665 aa25.27■■□□□ 1.64
CIRBP-216ENST00000588090 KLHL40Q2TBA0 621 aa25.27■■□□□ 1.64
CIRBP-216ENST00000588090 RTP2Q5QGT7 225 aa25.27■■□□□ 1.64
CIRBP-216ENST00000588090 LRRC52Q8N7C0 313 aa25.27■■□□□ 1.64
CIRBP-216ENST00000588090 RIN2Q8WYP3 895 aaPredicted RBP25.27■■□□□ 1.64
CIRBP-216ENST00000588090 B3GALT6Q96L58 329 aa25.27■■□□□ 1.64
CIRBP-216ENST00000588090 TMEM63CQ9P1W3 806 aa25.27■■□□□ 1.64
CIRBP-216ENST00000588090 RWDD2AQ9UIY3 292 aa25.27■■□□□ 1.64
CIRBP-216ENST00000588090 AGAP1Q9UPQ3 857 aa25.27■■□□□ 1.64
CIRBP-216ENST00000588090 ARHGEF37A1IGU5 675 aa25.26■■□□□ 1.63
CIRBP-216ENST00000588090 IKBKBO14920 756 aa25.26■■□□□ 1.63
CIRBP-216ENST00000588090 KRT19P08727 400 aa25.26■■□□□ 1.63
CIRBP-216ENST00000588090 NRIP1P48552 1158 aa25.26■■□□□ 1.63
CIRBP-216ENST00000588090 VAMP7P51809 220 aa25.26■■□□□ 1.63
CIRBP-216ENST00000588090 DPCR1Q3MIW9 517 aa25.26■■□□□ 1.63
CIRBP-216ENST00000588090 SV2CQ496J9 727 aa25.26■■□□□ 1.63
CIRBP-216ENST00000588090 TRAPPC11Q7Z392 1133 aa25.26■■□□□ 1.63
CIRBP-216ENST00000588090 RBM23Q86U06 439 aaKnown RBP25.26■■□□□ 1.63
CIRBP-216ENST00000588090 PIK3R5Q8WYR1 880 aa25.26■■□□□ 1.63
CIRBP-216ENST00000588090 M0QZQ0 153 aa25.25■■□□□ 1.63
CIRBP-216ENST00000588090 TKTP29401 623 aaKnown RBP25.25■■□□□ 1.63
CIRBP-216ENST00000588090 STX17P56962 302 aa25.25■■□□□ 1.63
CIRBP-216ENST00000588090 HYAL1Q12794 435 aa25.25■■□□□ 1.63
CIRBP-216ENST00000588090 SKIV2LQ15477 1246 aaKnown RBP25.25■■□□□ 1.63
CIRBP-216ENST00000588090 DUSP6Q16828 381 aa25.25■■□□□ 1.63
CIRBP-216ENST00000588090 DSTYKQ6XUX3 929 aa25.25■■□□□ 1.63
CIRBP-216ENST00000588090 APPL2Q8NEU8 664 aa25.25■■□□□ 1.63
CIRBP-216ENST00000588090 CXorf38Q8TB03 319 aa25.25■■□□□ 1.63
CIRBP-216ENST00000588090 FAM84AQ96KN4 292 aa25.25■■□□□ 1.63
CIRBP-216ENST00000588090 DUSP9Q99956 384 aaKnown RBP25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms