RNA–Protein interactions for RNA: ENST00000587905.5

LDLRAD4-212, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 5

Gene LDLRAD4, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-212ENST00000587905 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.12■■□□□ 1.13
LDLRAD4-212ENST00000587905 ZNF233A6NK53 670 aa22.11■■□□□ 1.13
LDLRAD4-212ENST00000587905 KINO60870 393 aaKnown RBP22.11■■□□□ 1.13
LDLRAD4-212ENST00000587905 SPATA31D3P0C874 917 aa22.11■■□□□ 1.13
LDLRAD4-212ENST00000587905 POU5F1Q01860 360 aaKnown RBP22.11■■□□□ 1.13
LDLRAD4-212ENST00000587905 SPATA31D4Q6ZUB0 917 aa22.11■■□□□ 1.13
LDLRAD4-212ENST00000587905 C12orf76Q8N812 135 aaPredicted RBP22.11■■□□□ 1.13
LDLRAD4-212ENST00000587905 SMRP1Q8NCR6 262 aa22.11■■□□□ 1.13
LDLRAD4-212ENST00000587905 LNX1Q8TBB1 728 aaPredicted RBP22.11■■□□□ 1.13
LDLRAD4-212ENST00000587905 FAM84AQ96KN4 292 aa22.11■■□□□ 1.13
LDLRAD4-212ENST00000587905 FBXL18Q96ME1 805 aa22.11■■□□□ 1.13
LDLRAD4-212ENST00000587905 COL25A1Q9BXS0 654 aaPredicted RBP22.11■■□□□ 1.13
LDLRAD4-212ENST00000587905 HOOK1Q9UJC3 728 aaKnown RBP22.11■■□□□ 1.13
LDLRAD4-212ENST00000587905 FAM50BQ9Y247 325 aa22.11■■□□□ 1.13
LDLRAD4-212ENST00000587905 GLUD1P00367 558 aa22.1■■□□□ 1.13
LDLRAD4-212ENST00000587905 SNRPFP62306 86 aaKnown RBP22.1■■□□□ 1.13
LDLRAD4-212ENST00000587905 KCNB1Q14721 858 aa22.1■■□□□ 1.13
LDLRAD4-212ENST00000587905 RARS2Q5T160 578 aaKnown RBP22.1■■□□□ 1.13
LDLRAD4-212ENST00000587905 C9orf57Q5W0N0 161 aa22.1■■□□□ 1.13
LDLRAD4-212ENST00000587905 PDXDC1Q6P996 788 aa22.1■■□□□ 1.13
LDLRAD4-212ENST00000587905 SYCE2Q6PIF2 218 aa22.1■■□□□ 1.13
LDLRAD4-212ENST00000587905 SUSD3Q96L08 255 aa22.1■■□□□ 1.13
LDLRAD4-212ENST00000587905 TIGD1Q96MW7 591 aa22.1■■□□□ 1.13
LDLRAD4-212ENST00000587905 SPTBN5Q9NRC6 3674 aaKnown RBP22.1■■□□□ 1.13
LDLRAD4-212ENST00000587905 TSHZ2Q9NRE2 1034 aa22.1■■□□□ 1.13
LDLRAD4-212ENST00000587905 FNIP2Q9P278 1114 aa22.1■■□□□ 1.13
LDLRAD4-212ENST00000587905 USP15Q9Y4E8 981 aaPredicted RBP22.1■■□□□ 1.13
LDLRAD4-212ENST00000587905 PRPF40AO75400 957 aaKnown RBP22.09■■□□□ 1.13
LDLRAD4-212ENST00000587905 SNRNP35Q16560 246 aaKnown RBP22.09■■□□□ 1.13
LDLRAD4-212ENST00000587905 LMBRD2Q68DH5 695 aaPredicted RBP22.09■■□□□ 1.13
LDLRAD4-212ENST00000587905 DSTYKQ6XUX3 929 aa22.09■■□□□ 1.13
LDLRAD4-212ENST00000587905 GPR65Q8IYL9 337 aa22.09■■□□□ 1.13
LDLRAD4-212ENST00000587905 SMYD4Q8IYR2 804 aaPredicted RBP22.09■■□□□ 1.13
LDLRAD4-212ENST00000587905 XXYLT1Q8NBI6 393 aa22.09■■□□□ 1.13
LDLRAD4-212ENST00000587905 GOLGA5Q8TBA6 731 aa22.09■■□□□ 1.13
LDLRAD4-212ENST00000587905 SMARCE1Q969G3 411 aa22.09■■□□□ 1.13
LDLRAD4-212ENST00000587905 IPO9Q96P70 1041 aaKnown RBP22.09■■□□□ 1.13
LDLRAD4-212ENST00000587905 UHRF1Q96T88 793 aaPredicted RBP22.09■■□□□ 1.13
LDLRAD4-212ENST00000587905 CLSTN3Q9BQT9 956 aa22.09■■□□□ 1.13
LDLRAD4-212ENST00000587905 KIAA1586Q9HCI6 787 aa22.09■■□□□ 1.13
LDLRAD4-212ENST00000587905 MAN1C1Q9NR34 630 aa22.09■■□□□ 1.13
LDLRAD4-212ENST00000587905 DZANK1Q9NVP4 752 aa22.09■■□□□ 1.13
LDLRAD4-212ENST00000587905 CGNQ9P2M7 1197 aaKnown RBP22.09■■□□□ 1.13
LDLRAD4-212ENST00000587905 SYN3O14994 580 aa22.08■■□□□ 1.13
LDLRAD4-212ENST00000587905 ADAM12O43184 909 aa22.08■■□□□ 1.13
LDLRAD4-212ENST00000587905 TGM5O43548 720 aa22.08■■□□□ 1.13
LDLRAD4-212ENST00000587905 EXOC3O60645 756 aa22.08■■□□□ 1.13
LDLRAD4-212ENST00000587905 KIF20AO95235 890 aa22.08■■□□□ 1.13
LDLRAD4-212ENST00000587905 SMC2O95347 1197 aa22.08■■□□□ 1.13
LDLRAD4-212ENST00000587905 HOXB8P17481 243 aaPredicted RBP22.08■■□□□ 1.13
LDLRAD4-212ENST00000587905 VARS2Q5ST30 1063 aaKnown RBP22.08■■□□□ 1.13
LDLRAD4-212ENST00000587905 ANKS3Q6ZW76 656 aa22.08■■□□□ 1.13
LDLRAD4-212ENST00000587905 NT5DC4Q86YG4 428 aa22.08■■□□□ 1.13
LDLRAD4-212ENST00000587905 CACTINQ8WUQ7 758 aaKnown RBP22.08■■□□□ 1.13
LDLRAD4-212ENST00000587905 RMND1Q9NWS8 449 aa22.08■■□□□ 1.13
LDLRAD4-212ENST00000587905 CDH22Q9UJ99 828 aa22.08■■□□□ 1.13
LDLRAD4-212ENST00000587905 TIMM13Q9Y5L4 95 aaPredicted RBP22.08■■□□□ 1.13
LDLRAD4-212ENST00000587905 CDY1Q9Y6F8 540 aa22.08■■□□□ 1.13
LDLRAD4-212ENST00000587905 A0A0C4DFX4 3053 aa22.08■■□□□ 1.13
LDLRAD4-212ENST00000587905 DLL1O00548 723 aa22.07■■□□□ 1.12
LDLRAD4-212ENST00000587905 ITGB3P05106 788 aa22.07■■□□□ 1.12
LDLRAD4-212ENST00000587905 WEE2P0C1S8 567 aa22.07■■□□□ 1.12
LDLRAD4-212ENST00000587905 TMEM191BP0C7N4 346 aa22.07■■□□□ 1.12
LDLRAD4-212ENST00000587905 OR1D2P34982 312 aa22.07■■□□□ 1.12
LDLRAD4-212ENST00000587905 ARPP19P56211 112 aa22.07■■□□□ 1.12
LDLRAD4-212ENST00000587905 UBE2HP62256 183 aa22.07■■□□□ 1.12
LDLRAD4-212ENST00000587905 SURF1Q15526 300 aa22.07■■□□□ 1.12
LDLRAD4-212ENST00000587905 TMC5Q6UXY8 1006 aa22.07■■□□□ 1.12
LDLRAD4-212ENST00000587905 C12orf56Q8IXR9 622 aa22.07■■□□□ 1.12
LDLRAD4-212ENST00000587905 CCDC127Q96BQ5 260 aa22.07■■□□□ 1.12
LDLRAD4-212ENST00000587905 MTMR12Q9C0I1 747 aa22.07■■□□□ 1.12
LDLRAD4-212ENST00000587905 S1PR5Q9H228 398 aa22.07■■□□□ 1.12
LDLRAD4-212ENST00000587905 KCTD10Q9H3F6 313 aa22.07■■□□□ 1.12
LDLRAD4-212ENST00000587905 MTRRQ9UBK8 725 aa22.07■■□□□ 1.12
LDLRAD4-212ENST00000587905 PCDHB8Q9UN66 801 aa22.07■■□□□ 1.12
LDLRAD4-212ENST00000587905 PCDHA5Q9Y5H7 936 aa22.07■■□□□ 1.12
LDLRAD4-212ENST00000587905 SCN1AP35498 2009 aa22.07■■□□□ 1.12
LDLRAD4-212ENST00000587905 ANO9A1A5B4 782 aa22.06■■□□□ 1.12
LDLRAD4-212ENST00000587905 PIRO00625 290 aa22.06■■□□□ 1.12
LDLRAD4-212ENST00000587905 PDXKO00764 312 aa22.06■■□□□ 1.12
LDLRAD4-212ENST00000587905 SPTLC1O15269 473 aa22.06■■□□□ 1.12
LDLRAD4-212ENST00000587905 KRT19P08727 400 aa22.06■■□□□ 1.12
LDLRAD4-212ENST00000587905 DLATP10515 647 aaKnown RBP22.06■■□□□ 1.12
LDLRAD4-212ENST00000587905 POLR2BP30876 1174 aaKnown RBP22.06■■□□□ 1.12
LDLRAD4-212ENST00000587905 LILRA4P59901 499 aa22.06■■□□□ 1.12
LDLRAD4-212ENST00000587905 SMAD2Q15796 467 aaKnown RBP22.06■■□□□ 1.12
LDLRAD4-212ENST00000587905 CES5AQ6NT32 575 aa22.06■■□□□ 1.12
LDLRAD4-212ENST00000587905 ELMSAN1Q6PJG2 1045 aa22.06■■□□□ 1.12
LDLRAD4-212ENST00000587905 APPL2Q8NEU8 664 aa22.06■■□□□ 1.12
LDLRAD4-212ENST00000587905 ANKRD36BP1Q96IX9 119 aa22.06■■□□□ 1.12
LDLRAD4-212ENST00000587905 FNBP1Q96RU3 617 aa22.06■■□□□ 1.12
LDLRAD4-212ENST00000587905 SFXN1Q9H9B4 322 aa22.06■■□□□ 1.12
LDLRAD4-212ENST00000587905 PTPRJQ12913 1337 aa22.06■■□□□ 1.12
LDLRAD4-212ENST00000587905 H7C4K7 107 aa22.05■■□□□ 1.12
LDLRAD4-212ENST00000587905 CALUO43852 315 aaPredicted RBP22.05■■□□□ 1.12
LDLRAD4-212ENST00000587905 NR3C1P04150 777 aa22.05■■□□□ 1.12
LDLRAD4-212ENST00000587905 TAF6P49848 677 aa22.05■■□□□ 1.12
LDLRAD4-212ENST00000587905 CYP24A1Q07973 514 aa22.05■■□□□ 1.12
LDLRAD4-212ENST00000587905 CTXN3Q4LDR2 81 aa22.05■■□□□ 1.12
LDLRAD4-212ENST00000587905 ISM2Q6H9L7 571 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms