RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 HS6ST3Q8IZP7 471 aa9.42□□□□□ -0.9
SDF2-204ENST00000587338 ELMOD1Q8N336 334 aa9.42□□□□□ -0.9
SDF2-204ENST00000587338 FAM200AQ8TCP9 573 aa9.42□□□□□ -0.9
SDF2-204ENST00000587338 EIF2AK1Q9BQI3 630 aaKnown RBP9.42□□□□□ -0.9
SDF2-204ENST00000587338 ADPGKQ9BRR6 497 aa9.42□□□□□ -0.9
SDF2-204ENST00000587338 SMOC1Q9H4F8 434 aa9.42□□□□□ -0.9
SDF2-204ENST00000587338 GOLGA2P5Q9HBQ8 144 aa9.42□□□□□ -0.9
SDF2-204ENST00000587338 GPRC5CQ9NQ84 441 aa9.42□□□□□ -0.9
SDF2-204ENST00000587338 KCNJ14Q9UNX9 436 aa9.42□□□□□ -0.9
SDF2-204ENST00000587338 USP20Q9Y2K6 914 aa9.42□□□□□ -0.9
SDF2-204ENST00000587338 FREM2Q5SZK8 3169 aa9.41□□□□□ -0.9
SDF2-204ENST00000587338 GREB1Q4ZG55 1949 aa9.41□□□□□ -0.9
SDF2-204ENST00000587338 WDFY3Q8IZQ1 3526 aa9.41□□□□□ -0.9
SDF2-204ENST00000587338 ARNTLO00327 626 aa9.41□□□□□ -0.9
SDF2-204ENST00000587338 ABLIM3O94929 683 aa9.41□□□□□ -0.9
SDF2-204ENST00000587338 SLITRK3O94933 977 aa9.41□□□□□ -0.9
SDF2-204ENST00000587338 EPN2O95208 641 aa9.41□□□□□ -0.9
SDF2-204ENST00000587338 HSP90AA1P07900 732 aaKnown RBP9.41□□□□□ -0.9
SDF2-204ENST00000587338 CCDC192P0DO97 292 aa9.41□□□□□ -0.9
SDF2-204ENST00000587338 ATF2P15336 505 aa9.41□□□□□ -0.9
SDF2-204ENST00000587338 RPS6KB1P23443 525 aa9.41□□□□□ -0.9
SDF2-204ENST00000587338 PXNP49023 591 aaPredicted RBP9.41□□□□□ -0.9
SDF2-204ENST00000587338 RARRES1P49788 294 aa9.41□□□□□ -0.9
SDF2-204ENST00000587338 NOVA1P51513 510 aaKnown RBP9.41□□□□□ -0.9
SDF2-204ENST00000587338 FOXC1Q12948 553 aa9.41□□□□□ -0.9
SDF2-204ENST00000587338 WDR44Q5JSH3 913 aa9.41□□□□□ -0.9
SDF2-204ENST00000587338 DGKKQ5KSL6 1271 aa9.41□□□□□ -0.9
SDF2-204ENST00000587338 CDCA2Q69YH5 1023 aaPredicted RBP9.41□□□□□ -0.9
SDF2-204ENST00000587338 SLC8B1Q6J4K2 584 aa9.41□□□□□ -0.9
SDF2-204ENST00000587338 C1orf228Q6PIY5 440 aa9.41□□□□□ -0.9
SDF2-204ENST00000587338 TXNDC11Q6PKC3 985 aa9.41□□□□□ -0.9
SDF2-204ENST00000587338 CD300LGQ6UXG3 332 aa9.41□□□□□ -0.9
SDF2-204ENST00000587338 RUFY3Q7L099 469 aa9.41□□□□□ -0.9
SDF2-204ENST00000587338 MFSD6LQ8IWD5 586 aa9.41□□□□□ -0.9
SDF2-204ENST00000587338 SLFN12Q8IYM2 578 aa9.41□□□□□ -0.9
SDF2-204ENST00000587338 TCEAL8Q8IYN2 117 aa9.41□□□□□ -0.9
SDF2-204ENST00000587338 SPRYD3Q8NCJ5 442 aa9.41□□□□□ -0.9
SDF2-204ENST00000587338 C3orf58Q8NDZ4 430 aa9.41□□□□□ -0.9
SDF2-204ENST00000587338 TTC8Q8TAM2 541 aa9.41□□□□□ -0.9
SDF2-204ENST00000587338 KCNB2Q92953 911 aa9.41□□□□□ -0.9
SDF2-204ENST00000587338 MSANTD3Q96H12 275 aa9.41□□□□□ -0.9
SDF2-204ENST00000587338 ZNF512Q96ME7 567 aaPredicted RBP9.41□□□□□ -0.9
SDF2-204ENST00000587338 UROC1Q96N76 676 aa9.41□□□□□ -0.9
SDF2-204ENST00000587338 PPP1R10Q96QC0 940 aaKnown RBP9.41□□□□□ -0.9
SDF2-204ENST00000587338 LSM14BQ9BX40 385 aaKnown RBP9.41□□□□□ -0.9
SDF2-204ENST00000587338 ASAH2Q9NR71 780 aa9.41□□□□□ -0.9
SDF2-204ENST00000587338 ANKEF1Q9NU02 776 aa9.41□□□□□ -0.9
SDF2-204ENST00000587338 PDRG1Q9NUG6 133 aa9.41□□□□□ -0.9
SDF2-204ENST00000587338 A0A087WWV3 80 aa9.4□□□□□ -0.9
SDF2-204ENST00000587338 SPECC1L-ADORA2AF8WAN1 911 aa9.4□□□□□ -0.9
SDF2-204ENST00000587338 MOSPD3O75425 235 aa9.4□□□□□ -0.9
SDF2-204ENST00000587338 RPP40O75818 363 aaKnown RBP9.4□□□□□ -0.9
SDF2-204ENST00000587338 LYPLA2O95372 231 aa9.4□□□□□ -0.9
SDF2-204ENST00000587338 BAG4O95429 457 aaKnown RBP9.4□□□□□ -0.9
SDF2-204ENST00000587338 SPINK2P20155 84 aa9.4□□□□□ -0.9
SDF2-204ENST00000587338 HOXA6P31267 233 aa9.4□□□□□ -0.9
SDF2-204ENST00000587338 CTHP32929 405 aa9.4□□□□□ -0.9
SDF2-204ENST00000587338 MPLP40238 635 aa9.4□□□□□ -0.9
SDF2-204ENST00000587338 TWF1Q12792 350 aa9.4□□□□□ -0.9
SDF2-204ENST00000587338 PON2Q15165 354 aa9.4□□□□□ -0.9
SDF2-204ENST00000587338 TEAD2Q15562 447 aa9.4□□□□□ -0.9
SDF2-204ENST00000587338 MAPK6Q16659 721 aa9.4□□□□□ -0.9
SDF2-204ENST00000587338 UPP1Q16831 310 aa9.4□□□□□ -0.9
SDF2-204ENST00000587338 FAM187BQ17R55 369 aa9.4□□□□□ -0.9
SDF2-204ENST00000587338 DCAF4L1Q3SXM0 396 aa9.4□□□□□ -0.9
SDF2-204ENST00000587338 EEF1DP3Q658K8 133 aa9.4□□□□□ -0.9
SDF2-204ENST00000587338 RNF43Q68DV7 783 aa9.4□□□□□ -0.9
SDF2-204ENST00000587338 TCEAL6Q6IPX3 200 aa9.4□□□□□ -0.9
SDF2-204ENST00000587338 PIK3AP1Q6ZUJ8 805 aa9.4□□□□□ -0.9
SDF2-204ENST00000587338 CACNA2D4Q7Z3S7 1137 aa9.4□□□□□ -0.9
SDF2-204ENST00000587338 KBTBD6Q86V97 674 aa9.4□□□□□ -0.9
SDF2-204ENST00000587338 GPIHBP1Q8IV16 184 aa9.4□□□□□ -0.9
SDF2-204ENST00000587338 PIGOQ8TEQ8 1089 aa9.4□□□□□ -0.9
SDF2-204ENST00000587338 GAB3Q8WWW8 586 aa9.4□□□□□ -0.9
SDF2-204ENST00000587338 TCEAL3Q969E4 200 aa9.4□□□□□ -0.9
SDF2-204ENST00000587338 SNX21Q969T3 373 aa9.4□□□□□ -0.9
SDF2-204ENST00000587338 RSPRY1Q96DX4 576 aa9.4□□□□□ -0.9
SDF2-204ENST00000587338 LOXL4Q96JB6 756 aa9.4□□□□□ -0.9
SDF2-204ENST00000587338 NAP1L4Q99733 375 aaKnown RBP9.4□□□□□ -0.9
SDF2-204ENST00000587338 AGXT2Q9BYV1 514 aa9.4□□□□□ -0.9
SDF2-204ENST00000587338 TM6SF1Q9BZW5 370 aa9.4□□□□□ -0.9
SDF2-204ENST00000587338 C2orf40Q9H1Z8 148 aa9.4□□□□□ -0.9
SDF2-204ENST00000587338 FZD8Q9H461 694 aa9.4□□□□□ -0.9
SDF2-204ENST00000587338 C8orf33Q9H7E9 229 aaPredicted RBP9.4□□□□□ -0.9
SDF2-204ENST00000587338 TRPV4Q9HBA0 871 aa9.4□□□□□ -0.9
SDF2-204ENST00000587338 ZSWIM6Q9HCJ5 1215 aa9.4□□□□□ -0.9
SDF2-204ENST00000587338 CEP72Q9P209 647 aa9.4□□□□□ -0.9
SDF2-204ENST00000587338 FBXL5Q9UKA1 691 aa9.4□□□□□ -0.9
SDF2-204ENST00000587338 FLNBO75369 2602 aaKnown RBP9.4□□□□□ -0.9
SDF2-204ENST00000587338 H7C4K7 107 aa9.39□□□□□ -0.91
SDF2-204ENST00000587338 K7ELQ4 463 aaPredicted RBP9.39□□□□□ -0.91
SDF2-204ENST00000587338 PODXLO00592 558 aa9.39□□□□□ -0.91
SDF2-204ENST00000587338 GIPC1O14908 333 aa9.39□□□□□ -0.91
SDF2-204ENST00000587338 CHADO15335 359 aa9.39□□□□□ -0.91
SDF2-204ENST00000587338 EXTL3O43909 919 aa9.39□□□□□ -0.91
SDF2-204ENST00000587338 CD2BP2O95400 341 aaKnown RBP9.39□□□□□ -0.91
SDF2-204ENST00000587338 EDN1P05305 212 aa9.39□□□□□ -0.91
SDF2-204ENST00000587338 RAP1GAPP47736 663 aa9.39□□□□□ -0.91
SDF2-204ENST00000587338 MCM2P49736 904 aa9.39□□□□□ -0.91
SDF2-204ENST00000587338 MLLT6P55198 1093 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms